Gcaud1225.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1225.t1
Unique NameGcaud1225.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1066
Homology
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BLAST of Gcaud1225.t1 vs. uniprot
Match: A0A2V3IBR7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBR7_9FLOR)

HSP 1 Score: 145 bits (367), Expect = 4.750e-35
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:  988 WDYKSTYMGQCDEFVWNNPPPRDLGSGVNWQGNRWTTLKGGGYHYANHGTDGGFYIRNGDGSSYHFSPHRGGRFTPA 1064
            WDY+STY GQCDE+VW NPPPR+LGSG+N  GNRWT L+GGGYHYANHGTDGGFYIRN DGSSYHFSP RGG F PA
Sbjct:  214 WDYESTYYGQCDEYVWRNPPPRNLGSGMNGYGNRWTNLRGGGYHYANHGTDGGFYIRNSDGSSYHFSPSRGGSFRPA 290
The following BLAST results are available for this feature:
BLAST of Gcaud1225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBR7_9FLOR4.750e-3581.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 336..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 939..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 707..723
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 903..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..823
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..781
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 883..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..839
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 755..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 883..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..689
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 939..958
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 706..726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2364_length_5942_cov_4.582465contigNODE_2364_length_5942_cov_4.582465:583..3780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1225.t1Gcaud1225.t1Gracilaria caudata M_176_S67 malemRNANODE_2364_length_5942_cov_4.582465 583..3780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1225.t1 ID=Gcaud1225.t1|Name=Gcaud1225.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1066bp
MGCISSKARHDSPTTQVRTLQTQSKGQSEGQTPSAPPAAPAPAQVPKQLR
APTLDVVEDEQKPQDLEERSETDPPEDLLRETPQTYFEDGPSPTNYDVTG
EQRHHVPDVVGSPSGNDSKDTVCEQPDDALFLPKQPALRRDDCHVATDSG
EEIPNQRAALPSVPNEDRSASVSTHTLTKEERRPHTSNGQDEGTGRTNIV
DLPLLDDDGGDTDLPANSLAEKVSPSIEYAFPPSFVEEKRQMSPQPPVLL
VNEVQGNVGHGFASTDQTERVPESNVSIRPIPENAVQNSVSTLGDAAQKN
CSEGNDIPLEGSYEKKDDTSDAAKSVTTPDTAEEDNDAAKQDAEQKEDHL
LNVQEDNTSSPERGQDEDESNSGAIISDVARSALDTETSKTLHEASNVEH
HAQDDAKTSSMIPSSFAHMNVKEDPDHSPLLPTNSEEPSPATPQTCSSPS
ETQHGHKGSHRPSEKRGTTTDVSDITDMASSSEASVRRDDRKPLGVSLRS
SPLQSNAQDQSARDSSFTGQSPVTQSAKPHSLNSSRTEGNAANLGRHKDT
STLLDPKKFTLSEWIEKHIEANREKLDDSTRPWEILGSTPLFSYSSAFSS
ASGNTQSLFTSSIFESAAAKTQSFSFDSAARLFGFGSSAFAPSSASTQSL
FGSSTSKINAFSFQHQTTEKQDQTIKSDDSQSPAFRSASANTQSLFGTST
LKSSTESFAERTEEKHGQSVKSDDFERPAFGSSSAFSQIAPAFGSTPVDT
KSLFGSSTSKSATEIQSKKTDEKRDQSIKSDSFERPAFGSSSVATESRPA
FGSAPAEIQGLFGSSTSKSATEILSKQTDEKRDQSIKSDSFEKPAFGSSW
ASTQSRSTFGSASADIQSLLGSSTSKSATDILLKKTDEKRDPSIKSDDFE
RPAFGSSSASTQSGPTSGSASANIQSLFGFSTLKSATESLSERNDEKRDK
PIKSDSFGNTASRSAQIIAEGLNMISTREDVRTLGEVWDYKSTYMGQCDE
FVWNNPPPRDLGSGVNWQGNRWTTLKGGGYHYANHGTDGGFYIRNGDGSS
YHFSPHRGGRFTPAR*
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