Gcaud2056.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2056.t1
Unique NameGcaud2056.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length216
Homology
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A2V3J607_9FLOR (Serine/threonine-protein phosphatase 4 regulatory subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J607_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 1.400e-43
Identity = 83/112 (74.11%), Postives = 93/112 (83.04%), Query Frame = 0
Query:  104 RPLGHLFSRVRETVHSWGNILVECLPNMQWTAQEIKDVIAFVNIHAIEQLYKSCKVAARVVGALARCLDKQKVEHIILPRALLLFDNTEIEVRGMVVESQAQVGAALPIRVT 215
            R  G       E  H WGNILVECLPNM+WTAQE+ DVIA V+IHA EQLY S KVAARVVGALA+CLDKQKVEH+ILPRAL LF++T+IEVRGMVVES AQ+GAALP+RVT
Sbjct:  768 RGKGKASPEYEELYHCWGNILVECLPNMRWTAQEVNDVIALVDIHAKEQLYTSRKVAARVVGALAQCLDKQKVEHVILPRALSLFEDTDIEVRGMVVESLAQIGAALPVRVT 879          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A2V3IFF9_9FLOR (Putative sulfur deprivation response regulator n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFF9_9FLOR)

HSP 1 Score: 144 bits (363), Expect = 3.520e-36
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLCNNDRPL 106
            MPLN+AA+LGGT  L GTSTNLVVNGLAI++ I G VDG  DGVG GLP+FG TP+GA+MLV GI+ +V  SRCLL DRG TGVDSIIR+PR+Y+VALL     P+
Sbjct:  312 MPLNNAAILGGTLTLLGTSTNLVVNGLAIESAILGTVDGTVDGVGKGLPIFGITPIGAIMLVAGIVYIVFFSRCLLRDRGQTGVDSIIRNPREYTVALLVQQRSPI 417          
BLAST of Gcaud2056.t1 vs. uniprot
Match: R7Q7M2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M2_CHOCR)

HSP 1 Score: 127 bits (319), Expect = 3.270e-30
Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 0
Query:  115 ETVHSWGNILVECLPNMQWTAQEIKDVIAFVNIHAIEQLYKSCKVAARVVGALARCLDKQKVEHIILPRALLLFDNTEIEVRGMVVESQAQVGAALPIRVT 215
            E  H WG ILV+CLPNM+W+ QEI DVI  V++HA E LY S ++A RV+GALA+C D+ ++E +ILPR + LF++ ++EVRG +VES A VGAALPIR T
Sbjct:   23 ELYHLWGGILVDCLPNMKWSNQEIADVITLVDVHAKEPLYTSRRIAGRVLGALAQCFDRNRIEKMILPRTVKLFEDGDVEVRGTIVESLASVGAALPIRYT 123          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A2V3IFH9_9FLOR (Putative sulfur deprivation response regulator n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH9_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 9.330e-25
Identity = 60/99 (60.61%), Postives = 79/99 (79.80%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALL 99
            MPL++AAVLGGT  L GTSTNLVVNGLA+K++I G VD  + G G+GL +FG TP+G ++LV G++ M+I S  LLPD G TGV ++IR+PR+Y+VALL
Sbjct:  294 MPLSNAAVLGGTLTLLGTSTNLVVNGLAVKSKILG-VD--EKGAGIGLALFGITPIGVVVLVCGLLYMLIFSHWLLPDCGQTGVGAMIRNPREYTVALL 389          
BLAST of Gcaud2056.t1 vs. uniprot
Match: R7QCA6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA6_CHOCR)

HSP 1 Score: 107 bits (266), Expect = 3.640e-23
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLCNNDRPL 106
            MPLN+AA+LGGT  L GTSTNLVV+GLA ++ +  + +G   G    LP+FG TPVGA++ V G++ M+  +R L+ DRG TGV +IIR+PR+Y+VALL     P+
Sbjct:  233 MPLNNAAILGGTITLLGTSTNLVVDGLARQSELLTDDNGQPTG----LPIFGITPVGAILFVAGVVYMLATTRLLIRDRGQTGVGAIIRNPREYTVALLVQERSPI 334          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A7S1ET24_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET24_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 5.440e-16
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLCNNDRPL 106
            MP+N+A +LGGT  L GTSTNLVV GLA    +  ++DGN     +  P+FG  P+GA   V GI+ +++ SR L+ DR   GV+S++++PR+Y+VAL      P+
Sbjct:  318 MPMNNATILGGTITLLGTSTNLVVVGLAQSANLL-DLDGNP----LSFPIFGIAPLGAPCAVVGILYLILASRFLIKDRKQ-GVESLVKNPREYTVALTVEEKSPI 417          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A7S0ZCU8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCU8_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 5.490e-16
Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  115 ETVH-SWGNILVECLPNMQWTAQEIKDVIAFVNIHAIEQLYKSCKVAARVVGALARCLDKQKVEHIILPRALLLFDNTEIEVRGMVVESQAQVGAALPIRV 214
            +T++ +WG ILV  LP +QW   E++ V++ ++ H+      S K+AARV+G+L   L+   ++ +ILPRAL L  ++++EVRGM  ES A +G+ LPI V
Sbjct:   45 DTIYEAWGEILVSVLPAVQWREDELQRVLSLIDAHSARTSEVSRKLAARVLGSLCHLLNPHSIQDLILPRALTLCSDSDVEVRGMTTESLAAIGSRLPISV 145          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A5J4ZB00_PORPP (Serine/threonine-protein phosphatase 4 regulatory subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZB00_PORPP)

HSP 1 Score: 84.3 bits (207), Expect = 2.740e-15
Identity = 43/97 (44.33%), Postives = 65/97 (67.01%), Query Frame = 0
Query:  115 ETVH-SWGNILVECLPNMQWTAQEIKDVIAFVNIHAIEQLYKSCKVAARVVGALARCLDKQKVEHIILPRALLLFDNTEIEVRGMVVESQAQVGAAL 210
            +T++ SWG ILV  LPN+ W+  E+  V++ ++ HA      S K+AARV+G+++ C+  ++V   ILPRAL L  + +IEVRGM  ES A +G+AL
Sbjct:  133 DTIYESWGEILVSVLPNVSWSDDELVRVLSLIDAHANRSSEVSRKLAARVIGSMSLCVTPEQVGQFILPRALRLCQDKDIEVRGMSTESLAFIGSAL 229          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A5J4YV28_PORPP (Putative sulfur deprivation response regulator n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV28_PORPP)

HSP 1 Score: 81.3 bits (199), Expect = 3.070e-14
Identity = 53/137 (38.69%), Postives = 81/137 (59.12%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLCNNDRPLGHLFSRVRETVHSWGNILVECLPNMQWTAQE 137
            MP+NDA +LGGT  L GTSTNL+V GLA +  +      +++G  +   +FG +PVGA + V GII ++I SR  L DR  TG+  ++++PR+Y+VAL      P+      + ETV   G   +E L  ++ T ++
Sbjct:  306 MPMNDATILGGTVTLLGTSTNLIVVGLAEEANLI-----DQNGQPLSFSIFGISPVGAPVCVIGIIYLLIASR-FLKDRK-TGLGELVKNPREYTVALKVEPKSPI------IGETVQEAGLRQLEGLFLVELTRED 429          
BLAST of Gcaud2056.t1 vs. uniprot
Match: A0A5J4YUE3_PORPP (Putative sulfur deprivation response regulator n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUE3_PORPP)

HSP 1 Score: 80.1 bits (196), Expect = 7.680e-14
Identity = 53/151 (35.10%), Postives = 85/151 (56.29%), Query Frame = 0
Query:    1 MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPVFGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLCNNDRPLGHLFSRVRETVHSWGNILVECLPNMQWTAQEIKDVIAFVNIHAIE 151
            MP+NDA +LGGT  L GTSTNL+V GLA + ++      +++G  +   +FG +P G    V GI+ ++I S  LL DR  +G + ++++PR+Y+VAL   +  P+      V ET+   G   +E L  +Q T ++ +   A    H +E
Sbjct:  317 MPMNDATILGGTVTLLGTSTNLIVVGLAQEAKLE-----DQEGNPLSFGIFGISPAGVPYCVIGILYLLIASHFLLRDRR-SGTNEVLQNPREYTVALKVESKSPI------VGETIQEAGLRQLEGLFLVQLTREDGETFSAPPPDHRLE 455          
The following BLAST results are available for this feature:
BLAST of Gcaud2056.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J607_9FLOR1.400e-4374.11Serine/threonine-protein phosphatase 4 regulatory ... [more]
A0A2V3IFF9_9FLOR3.520e-3667.92Putative sulfur deprivation response regulator n=1... [more]
R7Q7M2_CHOCR3.270e-3058.42Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFH9_9FLOR9.330e-2560.61Putative sulfur deprivation response regulator n=1... [more]
R7QCA6_CHOCR3.640e-2351.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1ET24_9RHOD5.440e-1644.34Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0ZCU8_9RHOD5.490e-1641.58Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4ZB00_PORPP2.740e-1544.33Serine/threonine-protein phosphatase 4 regulatory ... [more]
A0A5J4YV28_PORPP3.070e-1438.69Putative sulfur deprivation response regulator n=1... [more]
A0A5J4YUE3_PORPP7.680e-1435.10Putative sulfur deprivation response regulator n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..55
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2346_length_6019_cov_4.279521contigNODE_2346_length_6019_cov_4.279521:2736..5832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2056.t1Gcaud2056.t1Gracilaria caudata M_176_S67 malemRNANODE_2346_length_6019_cov_4.279521 2736..5832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2056.t1 ID=Gcaud2056.t1|Name=Gcaud2056.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=216bp
MPLNDAAVLGGTTFLTGTSTNLVVNGLAIKTRIFGNVDGNKDGVGMGLPV
FGSTPVGALMLVTGIITMVICSRCLLPDRGPTGVDSIIRSPRDYSVALLC
NNDRPLGHLFSRVRETVHSWGNILVECLPNMQWTAQEIKDVIAFVNIHAI
EQLYKSCKVAARVVGALARCLDKQKVEHIILPRALLLFDNTEIEVRGMVV
ESQAQVGAALPIRVT*
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