Gcaud1888.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1888.t1
Unique NameGcaud1888.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length51
Homology
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BLAST of Gcaud1888.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR)

HSP 1 Score: 65.5 bits (158), Expect = 3.810e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:    1 MTASLVQESIQTRFRSVADLQNCRIDPSETCLLRGGALETYWNNSIA 47
            MTASLVQE++   F+S+ D Q CRI P+E CL  GGALE +WN SIA
Sbjct:  274 MTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIA 320
The following BLAST results are available for this feature:
BLAST of Gcaud1888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IME4_9FLOR3.810e-1161.70Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2316_length_6104_cov_4.781473contigNODE_2316_length_6104_cov_4.781473:1510..1839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1888.t1Gcaud1888.t1Gracilaria caudata M_176_S67 malemRNANODE_2316_length_6104_cov_4.781473 1510..1839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1888.t1 ID=Gcaud1888.t1|Name=Gcaud1888.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=51bp
MTASLVQESIQTRFRSVADLQNCRIDPSETCLLRGGALETYWNNSIATRN
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