Gcaud778.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud778.t1
Unique NameGcaud778.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length220
Homology
BLAST of Gcaud778.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 294 bits (753), Expect = 1.460e-98
Identity = 141/221 (63.80%), Postives = 179/221 (81.00%), Query Frame = 0
Query:    1 MKLFFTAFFLAMLMPVFAEHTSN-ICPSRCNADRTNTVRECNHPVTRSLCEIVEC-DGGFACVLPGNAFLIANTQLELVEMVLEYSWSPEQRDLDTSTRFLDANVGFSCNAPSEYVVFGGDNTSNGGSEVAVVDFDKARRDGAWTGSTSVIANAGWFNSENQGSAQLKVSLRSKSSGAVVEGATLSDRIQPGTQSDCSSTNVAEVKIVRGSLHTRVTLELA 219
            M+ +F  F LA ++P+ A+H SN +CP+RCN DRT + REC+HPVTRSLC + EC D G++C +PGN+F+I+N QL L+E V+EY+WSPEQRDLDTSTRFLD NVGFSC++ ++Y+ FGGDNTS GG+EVAV+D +KAR+DG W  ST++I+NAGWF S+NQG AQ+KV LR KS G + E A++SDRI PGTQ  CS  NVA VKI+RGSLHTRVTLE A
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Gcaud778.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 244 bits (624), Expect = 3.550e-78
Identity = 116/183 (63.39%), Postives = 147/183 (80.33%), Query Frame = 0
Query:   38 RECNHPVTRSLCEIVECDG-GFACVLPGNAFLIANTQLELVEMVLEYSWSPEQRDLDTSTRFLDANVGFSCNAPSEYVVFGGDNTSNGGSEVAVVDFDKARRDGAWTGSTSVIANAGWFNSENQGSAQLKVSLRSKSSGAVVEGATLSDRIQPGTQSDCSSTNVAEVKIVRGSLHTRVTLELA 219
            RECNHPVTRS+C + EC+  G++C + GN+F+I+N QL L+E V+EY+WSPEQRDLD STRFLD NVGF C  P++Y+ FGGDNTSNG +EV V+D +KAR+D  W  ST++I+NA WF S+NQG AQ++V LR KS G + E A++SDRI PGTQS+CSS  VA VKI+RGS+HTRVTLE A
Sbjct:   94 RECNHPVTRSVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
BLAST of Gcaud778.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 8.740e-52
Identity = 100/217 (46.08%), Postives = 128/217 (58.99%), Query Frame = 0
Query:    9 FLAMLMPVFAEHTS--NICPSRCNADRTNTVRECNHPVTRSLCEIVEC------DGGFACVLPGNAFLIANTQLELVEMVLEYSWSPEQRDLDTSTRFLDANVGFSCNAPSEYVVFGGDNTSNGGSEVAVVDFDKARRDGAWTGSTSVIANAGWFNSENQGSAQLKVSLRSKSSGAVVEGATLSDRIQPGTQSDCSSTNVAEVKIVRGSLHTRVTLE 217
            F  +++ VF E     +ICP++C  +    +REC       LC +  C      D GF+C LP  +FL+ N++L   EMV+ Y W   +RDLDTSTRFL ANVGF C   S+Y+ + GD++ NGG E  VVDFDKARRDG WTG TS+  +AGW  S+ QG A + V +R   +    EG  L   I PGTQ  CS   VA VKI RG   TRVTL+
Sbjct:    9 FFVLIICVFTEDPPVFDICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDNHE--EGNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTLD 223          
The following BLAST results are available for this feature:
BLAST of Gcaud778.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6U1_9FLOR1.460e-9863.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR3.550e-7863.39Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR8.740e-5246.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2315_length_6107_cov_3.862866contigNODE_2315_length_6107_cov_3.862866:1654..2313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud778.t1Gcaud778.t1Gracilaria caudata M_176_S67 malemRNANODE_2315_length_6107_cov_3.862866 1654..2313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud778.t1 ID=Gcaud778.t1|Name=Gcaud778.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=220bp
MKLFFTAFFLAMLMPVFAEHTSNICPSRCNADRTNTVRECNHPVTRSLCE
IVECDGGFACVLPGNAFLIANTQLELVEMVLEYSWSPEQRDLDTSTRFLD
ANVGFSCNAPSEYVVFGGDNTSNGGSEVAVVDFDKARRDGAWTGSTSVIA
NAGWFNSENQGSAQLKVSLRSKSSGAVVEGATLSDRIQPGTQSDCSSTNV
AEVKIVRGSLHTRVTLELA*
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