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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005707364.1 |
| PFAMs | DLD,HHH_7,HTH_44,SH2_2,SPT6_acidic,YqgF |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11292 |
| GOs | GO:0000003,GO:0000018,GO:0000785,GO:0000988,GO:0000990,GO:0000991,GO:0002637,GO:0002682,GO:0002694,GO:0002697,GO:0002700,GO:0002703,GO:0002706,GO:0002712,GO:0002819,GO:0002822,GO:0002889,GO:0003006,GO:0003674,GO:0003682,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006325,GO:0006338,GO:0006342,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008023,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009299,GO:0009506,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010154,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010793,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022414,GO:0030054,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031491,GO:0031974,GO:0031981,GO:0032239,GO:0032268,GO:0032269,GO:0032386,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032879,GO:0032880,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0033157,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035327,GO:0040029,GO:0042393,GO:0042789,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045191,GO:0045595,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048608,GO:0048731,GO:0048856,GO:0050684,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0051049,GO:0051052,GO:0051128,GO:0051129,GO:0051147,GO:0051171,GO:0051172,GO:0051173,GO:0051223,GO:0051239,GO:0051246,GO:0051248,GO:0051249,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0055044,GO:0060255,GO:0060341,GO:0061085,GO:0061086,GO:0061458,GO:0065007,GO:0070013,GO:0070201,GO:0070827,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902275,GO:1902679,GO:1902680,GO:1903311,GO:1903506,GO:1903507,GO:1903508,GO:1903827,GO:1905268,GO:2000026,GO:2000112,GO:2000113,GO:2000197,GO:2001141,GO:2001251 |
| Evalue | 1.3e-125 |
| EggNOG OGs | COG2183@1|root,KOG1856@2759|Eukaryota |
| Description | obsolete transcription factor activity, core RNA polymerase II binding |
| COG category | K |
| BRITE | ko00000,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud2080.t1.stop1 | Gcaud2080.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_2313_length_6108_cov_14.596310 6052..6054 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud2080.t1 ID=Gcaud2080.t1|Name=Gcaud2080.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1722bp PRLFAAAIRADHRAISDNEGLFEDEARAENPEEQKFEDSSEEEEDEDNYE KDDYIVDDEGDDIGDEDGLAAPVPHLDDSAFRDVRRKKKKKRRRHREDSP ELAEGICNCASDEEENAFVDDVRVFVDDDENMYEDHRRSAIEPVDYEDDM DEFIDDGGRKKKKAAEREGLLSSETVRHARSIFGDAEEMTQYKGAGKLFK QNRDGGDEDDEDFVAEKDVGESERPLRRIQDRDSDLDDFEDDLPEQDTVR RDPAGETITKELTAPKDGSEKLTRIVTTDIPEQLENHFGPDYKAPTELEI QDEAEWIYRFGFQENPLFADITRFPASEVKKRIVVVLSYIHIDNLDIPFI AMYRKDYTTPYLVQSAGEVLRDFNQRSSAYKSEPMPPPRGFNSLVHEDLG IQCSFDHKRGVPAGYHDGFGDWSTLWHILDLDKRYWTIQKLKKTVIRAAD EAGDNGIPDTVIENVKAMALMAEVEQSLRDAEKYLRLELQRQEALKKQDD MKYLNGGSGSNKRAVKRKNKYSDYCARGYRDLAREFGLTARQVGENLKGA AEYGGSVQVHVPLEADDEPMSIATRYAISLEDNLSLQSEADNDRLAIAAG RILYAARYVLMTEIVADMTVVQTARKFICKPGTVSITTTPTPQGITQVGE NHPLRSVTSLFEKKLESFANTSDYVLVKRAVELGFTEMEINLQPEAINAF ERMLSSAFLVSELEIISPLVEKWNKERLLIVDEVKSALVKQMKEEVELEL RENTAVVLRHKICNAASRRFLLGPSMPNPADDACPRVLAFCVTSEDDEEA DPLQVAKDTETAKEKSQRNSYQRLARERITVAELDENGEYQNGYELFAGW LRRPFRGNEAELPVPVKDQIRSFITRARAQTLVIGLGSGGRGALRLQEDL VSILAEMAYAKPNEDGEEPIRPAMLSGAEVRQIQRIHDDGARPEFDAKQA FKRLIGPYVVCVDEFPARIYAKTKWIDCGLNVDALTLLEKRAIGLARLAQ EPLWGFGSIGHEVEHALHLKFHPHHYFAKPSDRVLGLRRALYRAVCANGV DINRTLRIPHTQVLVGYVGGLGLHKGRALVKSLEHMLSEEDHGLFSRKHL WSQNYIGKTVFISAAAFLRIRDPELHSGGSTKRAAELRRNRFNRKSRGRR RDEDDDGIYDPMDDSRVHPEHYAVAIKIADEALRDDDGNLPNDFGNSDEY DAKRITSAVLDDPSGLQRLALDEYAKSLELRGRGSLYETVKLIASEFKGS FKDWRVPLASPEPEATFYLSTGADPLTIRIGGPVTATNCLIRTRPRDGSV VGIACRLPHDLRGFIRGRDFSEKEGMSRGEYKRLVPDGSSLSCRILGFNY ERLEVMLTARSDVLKNPTGIKGYMELVNKDDDAFRPYPQIDGLSISGRKT LEGTAASISGDARGRKNLNRTMSQLRARARPVVQHPLFHDIPGETAIEQL KGRLPGDIIIRPSQYRTDGIVFSCKFASQLGDADSRKGIFHVDCRMDYDP DDDSVPVRLRIEDNIYEDVEQVLEQYLRPIISNLTESLDHRKFKHGDTES LQNYVSVTKRDNPKCISYVIGLSDRRPGHLVIVYIPGEKTVASEEIRVVP DGYKLRSILHKNLDVLTAWFKLNMRNVATVRKPASSAFPASPFITASPHA HARSPFISAIGTPAFQGAKSPFQSGAKSPFQSGVKSPFLGAAKSPFQAGS RSPHPNTARSPYAGARSPART* back to topspliced messenger RNA >Gcaud2080.t1 ID=Gcaud2080.t1|Name=Gcaud2080.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5166bp|location=Sequence derived from alignment at NODE_2313_length_6108_cov_14.596310:717..6054+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
CCTCGTTTATTCGCTGCGGCCATCCGTGCTGACCATCGTGCCATTTCCGA CAACGAAGGATTGTTTGAAGACGAGGCGAGAGCTGAAAACCCAGAAGAAC AAAAATTCGAGGACTCCAGTgaggaagaagaggatgaggacaactacgag aaggacgactacatcgtcgacgacgaaggcgacgaTATAGGAGATGAAGA TGGCCTAGCAGCCCCTGTCCCGCATCTTGATGACAGCGCTTTCCGTGACG TGCGGCGAAAGAAGAAGAAGAAGCGACGCCGTCACCGCGAAGATTCTCCA GAACTGGCTGAGGGGATCTGCAACTGCGCTTCGGACGAAGAGGAAAACGC TTTTGTGGACGACGTGAGAGTCTTTGTGGATGACGATGAAAACATGTACG AAGATCACAGACGCTCGGCCATTGAACCCGTCGATTATGAAGACGATATG GATGAATTCATCGACGACGGCGGTAGAAAGAAAAAGAAGGCTGCCGAGCG CGAAGGCCTCCTAAGTTCAGAAACTGTTCGACACGCCCGCTCAATCTTCG GAGATGCAGAGGAAATGACTCAGTACAAGGGCGCCGGCAAACTTTTCAAG CAGAATAGAGATGGTGGTGACGAAGACGATGAAGACTTCGTTGCAGAAAA AGACGTTGGGGAAAGCGAACGGCCGCTGCGTAGAATTCAGGACCGTGATA GCGATTTAGACGATTTTGAAGACGACTTGCCAGAACAGGACACTGTACGC AGAGATCCGGCAGGGGAAACAATAACCAAGGAACTCACAGCTCCAAAAGA CGGCTCAGAGAAATTGACAAGGATTGTCACTACTGATATACCTGAACAGC TTGAGAATCACTTTGGACCAGACTACAAGGCTCCAACAGAACTCGAAATC CAAGACGAAGCGGAATGGATATATCGTTTCGGTTTCCAAGAGAACCCTTT GTTTGCGGATATAACACGCTTCCCGGCGTCTGAAGTCAAAAAGCGTATTG TTGTTGTGTTATCGTACATTCACATTGACAACCTCGACATTCCTTTTATT GCTATGTACAGGAAAGATTATACTACTCCATACCTTGTGCAATCAGCGGG AGAAGTACTTCGAGATTTCAACCAACGGTCAAGCGCATACAAAAGTGAAC CTATGCCACCTCCACGTGGTTTCAATTCTCTTGTGCACGAAGACCTCGGT ATTCAATGTTCATTTGACCATAAGCGAGGAGTTCCTGCTGGATATCATGA TGGATTTGGAGACTGGAGTACATTGTGGCATATACTGGATCTGGACAAGC GATACTGGACTATTCAGAAACTCAAGAAAACTGTTATTCGTGCAGCCGAT GAAGCTGGTGATAATGGTATTCCCGACACTGTTATTGAAAATGTCAAAGC CATGGCTCTTATGGCAGAAGTTGAACAGTCCCTTAGAGACGCTGAGAAGT ATTTGCGTCTTGAGCTCCAACGTCAAGAAGCGCTGAAGAAGCAAGACGAC ATGAAGTACTTAAATGGAGGATCAGGATCGAATAAGCGTGCGGTAAAGAG GAAAAACAAATACTCTGACTATTGCGCTCGTGGTTATCGCGATCTGGCTC GAGAGTTCGGGCTTACAGCCAGACAGGTTGGAGAGAATCTGAAGGGAGCT GCGGAATACGGCGGAAGCGTGCAAGTACACGTTCCGCTTGAAGCAGATGA CGAACCGATGTCAATAGCGACAAGGTATGCCATCAGCCTAGAGGATAATC TGAGTTTGCAGTCGGAGGCGGATAATGATAGACTGGCGATAGCAGCTGGA AGAATCTTGTACGCTGCTCGGTATGTTCTAATGACTGAGATTGTTGCTGA CATGACCGTGGTGCAGACGGCACGGAAGTTTATATGCAAACCAGGGACAG TGTCGATCACGACCACTCCAACACCTCAAGGAATTACCCAAGTCGGAGAG AATCATCCCTTACGATCGGTAACGAGCTTGTTCGAGAAGAAACTTGAGAG CTTTGCCAATACGTCTGACTATGTTCTGGTCAAGCGAGCTGTGGAACTTG GGTTCACAGAGATGGAGATCAATCTTCAACCCGAGGCAATTAATGCGTTC GAACGAATGCTGAGCTCGGCATTTCTCGTATCGGAGCTTGAAATCATTTC ACCGCTTGTAGAGAAATGGAACAAGGAGAGGCTTCTCATCGTGGATGAGG TGAAGTCAGCTTTGGTCAAGCAAATGAAGGAGGAAGTTGAACTCGAACTT CGTGAAAATACTGCAGTTGTTCTCAGGCACAAAATATGCAATGCTGCCTC TCGTCGTTTTCTACTTGGACCGAGTATGCCAAACCCAGCTGATGATGCAT GTCCTAGAGTCCTGGCTTTCTGCGTCACTTCCGAGGATGATGAAGAGGCA GATCCCCTACAGGTTGCAAAAGACACCGAGACCGCAAAGGAGAAAAGTCA GAGGAACTCATATCAGCGTCTGGCTCGTGAACGGATAACTGTCGCTGAAC TGGACGAGAATGGCGAGTATCAAAACGGCTATGAGCTCTTTGCAGGATGG CTTCGACGACCATTTCGTGGTAATGAAGCGGAGCTTCCTGTACCGGTGAA GGATCAAATAAGGAGTTTCATCACTAGGGCTCGCGCCCAAACACTGGTTA TAGGTTTGGGCAGCGGTGGTCGCGGAGCTTTGCGGCTTCAGGAAGATCTC GTAAGTATATTGGCCGAAATGGCCTACGCCAAACCAAACGAAGACGGAGA AGAACCTATTAGACCAGCGATGCTTTCAGGTGCAGAAGTTAGACAAATTC AAAGGATTCATGACGACGGCGCGAGGCCAGAGTTCGATGCCAAACAGGCG TTTAAGCGCCTTATTGGACCTTATGTCGTTTGCGTTGACGAATTTCCAGC CAGAATATATGCGAAGACGAAATGGATTGATTGCGGTTTGAATGTAGATG CCTTGACCCTTTTGGAAAAGAGGGCAATAGGACTTGCTCGACTAGCCCAA GAACCTCTGTGGGGTTTTGGCTCTATTGGGCATGAAGTTGAACATGCTCT ACATCTGAAGTTTCACCCGCATCACTACTTTGCCAAGCCAAGTGACCGGG TTTTGGGCTTGCGCCGAGCTCTGTATCGTGCGGTTTGTGCCAATGGTGTT GATATTAACAGAACCCTCCGCATTCCGCACACGCAGGTTCTGGTTGGATA TGTAGGAGGGCTAGGTCTGCACAAGGGGAGAGCCCTTGTGAAGTCATTAG AACACATGCTAAGCGAGGAAGATCACGGACTGTTCTCCAGAAAGCATTTA TGGTCACAGAATTACATCGGAAAGACTGTCTTTATATCCGCAGCCGCGTT CCTTCGCATCAGAGATCCGGAACTGCACTCTGGTGGCAGCACTAAACGTG CCGCAGAATTGAGACGAAACAGGTTCAACCGGAAATCGCGGGGAAGGAGA AGAGACGAAGATGACGATGGCATATACGATCCTATGGACGACTCCCGCGT TCATCCAGAACACTATGCAGTAGCAATCAAGATCGCAGACGAAGCGTTGA GAGATGATGACGGTAATCTGCCAAATGATTTCGGAAACTCTGATGAGTAT GATGCAAAGCGTATAACATCTGCAGTGCTGGACGACCCGTCTGGCTTGCA GCGCTTAGCTTTGGACGAATACGCTAAGAGCCTTGAACTACGTGGAAGGG GATCATTGTACGAAACTGTGAAGCTCATCGCAAGCGAGTTCAAGGGGTCA TTTAAGGACTGGCGTGTTCCACTAGCGTCTCCGGAACCGGAAGCCACGTT CTATCTCTCTACCGGGGCGGACCCGCTGACAATTCGTATCGGAGGTCCTG TAACGGCAACTAATTGCTTGATTCGCACTCGACCTAGAGATGGGTCGGTG GTGGGGATTGCATGTCGACTACCGCACGATCTGAGAGGATTTATTCGGGG GAGAGACTTTTCAGAAAAGGAAGGGATGTCTAGAGGTGAATACAAACGCT TAGTTCCTGATGGCTCCTCCCTTTCGTGTCGAATTCTTGGGTTTAACTAT GAAAGACTTGAAGTAATGCTGACTGCGAGATCGGACGTTCTGAAGAATCC AACTGGAATCAAAGGATACATGGAACTAGTGAACAAAGATGACGACGCTT TCAGACCATATCCTCAAATCGATGGCCTCAGCATAAGTGGGAGGAAGACA CTAGAAGGTACTGCGGCATCAATCTCAGGTGACGCGAGAGGGCGAAAGAA TTTGAATAGGACAATGTCGCAGTTGCGAGCAAGAGCGAGGCCAGTAGTGC AGCATCCTTTGTTCCACGACATTCCTGGAGAGACCGCCATTGAGCAGCTG AAGGGAAGACTTCCCGGGGATATTATAATACGACCTAGTCAATACAGGAC GGATGGCATTGTTTTCTCGTGCAAGTTCGCTTCACAGTTGGGTGACGCAG ATTCTCGGAAGGGAATCTTTCACGTTGACTGTCGGATGGATTATGATCCC GATGATGATTCTGTACCGGTCAGGTTACGTATCGAAGATAACATATATGA AGACGTCGAGCAAGTGCTGGAACAATATCTGCGCCCAATTATATCTAATC TGACGGAGAGCTTGGACCACCGCAAGTTTAAGCATGGGGATACGGAATCT TTGCAAAACTACGTCTCTGTGACTAAGAGGGATAACCCGAAGTGCATATC TTACGTTATTGGGCTCTCTGATCGAAGACCAGGTCATTTGGTCATAGTTT ACATACCTGGGGAAAAAACTGTCGCATCCGAGGAAATTCGAGTTGTCCCA GATGGCTACAAACTACGATCGATTCTGCATAAGAACTTGGACGTGCTGAC TGCTTGGTTTAAGTTGAACATGCGGAATGTTGCTACTGTGAGAAAACCGG CTTCTTCTGCCTTTCCTGCATCGCCATTCATAACGGCCTCACCTCATGCG CATGCAAGGTCTCCGTTTATCTCAGCAATAGGAACACCCGCTTTCCAAGG AGCCAAGTCTCCCTTCCAAAGTGGAGCAAAGTCTCCCTTCCAAAGCGGAG TAAAGTCTCCGTTTCTTGGAGCAGCGAAGTCTCCTTTCCAAGCAGGTTCT CGATCTCCGCATCCTAACACCGCTCGTTCTCCTTATGCTGGTGCGCGGTC GCCcgcccgcacgtga back to topprotein sequence of Gcaud2080.t1 >Gcaud2080.t1 ID=Gcaud2080.t1|Name=Gcaud2080.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1722bp
PRLFAAAIRADHRAISDNEGLFEDEARAENPEEQKFEDSSEEEEDEDNYE KDDYIVDDEGDDIGDEDGLAAPVPHLDDSAFRDVRRKKKKKRRRHREDSP ELAEGICNCASDEEENAFVDDVRVFVDDDENMYEDHRRSAIEPVDYEDDM DEFIDDGGRKKKKAAEREGLLSSETVRHARSIFGDAEEMTQYKGAGKLFK QNRDGGDEDDEDFVAEKDVGESERPLRRIQDRDSDLDDFEDDLPEQDTVR RDPAGETITKELTAPKDGSEKLTRIVTTDIPEQLENHFGPDYKAPTELEI QDEAEWIYRFGFQENPLFADITRFPASEVKKRIVVVLSYIHIDNLDIPFI AMYRKDYTTPYLVQSAGEVLRDFNQRSSAYKSEPMPPPRGFNSLVHEDLG IQCSFDHKRGVPAGYHDGFGDWSTLWHILDLDKRYWTIQKLKKTVIRAAD EAGDNGIPDTVIENVKAMALMAEVEQSLRDAEKYLRLELQRQEALKKQDD MKYLNGGSGSNKRAVKRKNKYSDYCARGYRDLAREFGLTARQVGENLKGA AEYGGSVQVHVPLEADDEPMSIATRYAISLEDNLSLQSEADNDRLAIAAG RILYAARYVLMTEIVADMTVVQTARKFICKPGTVSITTTPTPQGITQVGE NHPLRSVTSLFEKKLESFANTSDYVLVKRAVELGFTEMEINLQPEAINAF ERMLSSAFLVSELEIISPLVEKWNKERLLIVDEVKSALVKQMKEEVELEL RENTAVVLRHKICNAASRRFLLGPSMPNPADDACPRVLAFCVTSEDDEEA DPLQVAKDTETAKEKSQRNSYQRLARERITVAELDENGEYQNGYELFAGW LRRPFRGNEAELPVPVKDQIRSFITRARAQTLVIGLGSGGRGALRLQEDL VSILAEMAYAKPNEDGEEPIRPAMLSGAEVRQIQRIHDDGARPEFDAKQA FKRLIGPYVVCVDEFPARIYAKTKWIDCGLNVDALTLLEKRAIGLARLAQ EPLWGFGSIGHEVEHALHLKFHPHHYFAKPSDRVLGLRRALYRAVCANGV DINRTLRIPHTQVLVGYVGGLGLHKGRALVKSLEHMLSEEDHGLFSRKHL WSQNYIGKTVFISAAAFLRIRDPELHSGGSTKRAAELRRNRFNRKSRGRR RDEDDDGIYDPMDDSRVHPEHYAVAIKIADEALRDDDGNLPNDFGNSDEY DAKRITSAVLDDPSGLQRLALDEYAKSLELRGRGSLYETVKLIASEFKGS FKDWRVPLASPEPEATFYLSTGADPLTIRIGGPVTATNCLIRTRPRDGSV VGIACRLPHDLRGFIRGRDFSEKEGMSRGEYKRLVPDGSSLSCRILGFNY ERLEVMLTARSDVLKNPTGIKGYMELVNKDDDAFRPYPQIDGLSISGRKT LEGTAASISGDARGRKNLNRTMSQLRARARPVVQHPLFHDIPGETAIEQL KGRLPGDIIIRPSQYRTDGIVFSCKFASQLGDADSRKGIFHVDCRMDYDP DDDSVPVRLRIEDNIYEDVEQVLEQYLRPIISNLTESLDHRKFKHGDTES LQNYVSVTKRDNPKCISYVIGLSDRRPGHLVIVYIPGEKTVASEEIRVVP DGYKLRSILHKNLDVLTAWFKLNMRNVATVRKPASSAFPASPFITASPHA HARSPFISAIGTPAFQGAKSPFQSGAKSPFQSGVKSPFLGAAKSPFQAGS RSPHPNTARSPYAGARSPART* back to topmRNA from alignment at NODE_2313_length_6108_cov_14.596310:717..6054+ Legend: polypeptideCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud2080.t1 ID=Gcaud2080.t1|Name=Gcaud2080.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5338bp|location=Sequence derived from alignment at NODE_2313_length_6108_cov_14.596310:717..6054+ (Gracilaria caudata M_176_S67 male) CCTCGTTTATTCGCTGCGGCCATCCGTGCTGACCATCGTGCCATTTCCGA
CAACGAAGGATTGTTTGAAGACGAGGCGAGAGCTGAAAACCCAGAAGAAC
AAAAATTCGAGGACTCCAGTgaggaagaagaggatgaggacaactacgag
aaggacgactacatcgtcgacgacgaaggcgacgaTATAGGAGATGAAGA
TGGCCTAGCAGCCCCTGTCCCGCATCTTGATGACAGCGCTTTCCGTGACG
TGCGGCGAAAGAAGAAGAAGAAGCGACGCCGTCACCGCGAAGATTCTCCA
GAACTGGCTGAGGGGATCTGCAACTGTTGAAAGAAGGAGGTGCACGAATT
GAGGGGCGCAAAAAGCGGAAACATCTTCGCAAAGGCGCTTCGGACGAAGA
GGAAAACGCTTTTGTGGACGACGTGAGAGTCTTTGTGGATGACGATGAAA
ACATGTACGAAGATCACAGACGCTCGGCCATTGAACCCGTCGATTATGAA
GACGATATGGATGAATTCATCGACGACGGCGGTAGAAAGAAAAAGAAGGC
TGCCGAGCGCGAAGGCCTCCTAAGTTCAGAAACTGTTCGACACGCCCGCT
CAATCTTCGGAGATGCAGAGGAAATGACTCAGTACAAGGGCGCCGGCAAA
CTTTTCAAGCAGAATAGAGATGGTGGTGACGAAGACGATGAAGACTTCGT
TGCAGAAAAAGACGTTGGGGAAAGCGAACGGCCGCTGCGTAGAATTCAGG
ACCGTGATAGCGATTTAGACGATTTTGAAGACGACTTGCCAGAACAGGAC
ACTGTACGCAGAGATCCGGCAGGGGAAACAATAACCAAGGAACTCACAGC
TCCAAAAGACGGCTCAGAGAAATTGACAAGGATTGTCACTACTGATATAC
CTGAACAGCTTGAGAATCACTTTGGACCAGACTACAAGGCTCCAACAGAA
CTCGAAATCCAAGACGAAGCGGAATGGATATATCGTTTCGGTTTCCAAGA
GAACCCTTTGTTTGCGGATATAACACGCTTCCCGGCGTCTGAAGTCAAAA
AGCGTATTGTTGTTGTGTTATCGTACATTCACATTGACAACCTCGACATT
CCTTTTATTGCTATGTACAGGAAAGATTATACTACTCCATACCTTGTGCA
ATCAGCGGGAGAAGTACTTCGAGATTTCAACCAACGGTCAAGCGCATACA
AAAGTGAACCTATGCCACCTCCACGTGGTTTCAATTCTCTTGTGCACGAA
GACCTCGGTATTCAATGTTCATTTGACCATAAGCGAGGAGTTCCTGCTGG
ATATCATGATGGATTTGGAGACTGGAGTACATTGTGGCATATACTGGATC
TGGACAAGCGATACTGGACTATTCAGAAACTCAAGAAAACTGTTATTCGT
GCAGCCGATGAAGCTGGTGATAATGGTATTCCCGACACTGTTATTGAAAA
TGTCAAAGCCATGGCTCTTATGGCAGAAGTTGAACAGTCCCTTAGAGACG
CTGAGAAGTATTTGCGTCTTGAGCTCCAACGTCAAGAAGCGCTGAAGAAG
CAAGACGACATGAAGTACTTAAATGGAGGATCAGGATCGAATAAGCGTGC
GGTAAAGAGGAAAAACAAATACTCTGACTATTGCGCTCGTGGTTATCGCG
ATCTGGCTCGAGAGTTCGGGCTTACAGCCAGACAGGTTGGAGAGAATCTG
AAGGGAGCTGCGGAATACGGCGGAAGCGTGCAAGTACACGTTCCGCTTGA
AGCAGATGACGAACCGATGTCAATAGCGACAAGGTATGCCATCAGCCTAG
AGGATAATCTGAGTTTGCAGTCGGAGGCGGATAATGATAGACTGGCGATA
GCAGCTGGAAGAATCTTGTACGCTGCTCGGTATGTTCTAATGACTGAGAT
TGTTGCTGACATGACCGTGGTGCAGACGGCACGGAAGTTTATATGCAAAC
CAGGGACAGTGTCGATCACGACCACTCCAACACCTCAAGGAATTACCCAA
GTCGGAGAGAATCATCCCTTACGATCGGTAACGAGCTTGTTCGAGAAGAA
ACTTGAGAGCTTTGCCAATACGTCTGACTATGTTCTGGTCAAGCGAGCTG
TGGAACTTGGGTTCACAGAGATGGAGATCAATCTTCAACCCGAGGCAATT
AATGCGTTCGAACGAATGCTGAGCTCGGCATTTCTCGTATCGGAGCTTGA
AATCATTTCACCGCTTGTAGAGAAATGGAACAAGGAGAGGCTTCTCATCG
TGGATGAGGTGAAGTCAGCTTTGGTCAAGCAAATGAAGGAGGAAGTTGAA
CTCGAACTTCGTGAAAATACTGCAGTTGTTCTCAGGCACAAAATATGCAA
TGCTGCCTCTCGTCGTTTTCTACTTGGACCGAGTATGCCAAACCCAGCTG
ATGATGCATGTCCTAGAGTCCTGGCTTTCTGCGTCACTTCCGAGGATGAT
GAAGAGGCAGATCCCCTACAGGTTGCAAAAGACACCGAGACCGCAAAGGA
GAAAAGTCAGAGGAACTCATATCAGCGTCTGGCTCGTGAACGGATAACTG
TCGCTGAACTGGACGAGAATGGCGAGTATCAAAACGGCTATGAGCTCTTT
GCAGGATGGCTTCGACGACCATTTCGTGGTAATGAAGCGGAGCTTCCTGT
ACCGGTGAAGGATCAAATAAGGAGTTTCATCACTAGGGCTCGCGCCCAAA
CACTGGTTATAGGTTTGGGCAGCGGTGGTCGCGGAGCTTTGCGGCTTCAG
GAAGATCTCGTAAGTATATTGGCCGAAATGGCCTACGCCAAACCAAACGA
AGACGGAGAAGAACCTATTAGACCAGCGATGCTTTCAGGTGCAGAAGTTA
GACAAATTCAAAGGATTCATGACGACGGCGCGAGGCCAGAGTTCGATGCC
AAACAGGCGTTTAAGCGCCTTATTGGACCTTATGTCGTTTGCGTTGACGA
ATTTCCAGCCAGAATATATGCGAAGACGAAATGGATTGATTGCGGTTTGA
ATGTAGATGCCTTGACCCTTTTGGAAAAGAGGGCAATAGGACTTGCTCGA
CTAGCCCAAGAACCTCTGTGGGGTTTTGGCTCTATTGGGCATGAAGTTGA
ACATGCTCTACATCTGAAGTTTCACCCGCATCACTACTTTGCCAAGCCAA
GTGACCGGGTTTTGGGCTTGCGCCGAGCTCTGTATCGTGCGGTTTGTGCC
AATGGTGTTGATATTAACAGAACCCTCCGCATTCCGCACACGCAGGTTCT
GGTTGGATATGTAGGAGGGCTAGGTCTGCACAAGGGGAGAGCCCTTGTGA
AGTCATTAGAACACATGCTAAGCGAGGAAGATCACGGACTGTTCTCCAGA
AAGCATTTATGGTCACAGAATTACATCGGAAAGACTGTCTTTATATCCGC
AGCCGCGTTCCTTCGCATCAGAGATCCGGAACTGCACTCTGGTGGCAGCA
CTAAACGTGCCGCAGAATTGAGACGAAACAGGTTCAACCGGAAATCGCGG
GGAAGGAGAAGAGACGAAGATGACGATGGCATATACGATCCTATGGACGA
CTCCCGCGTTCATCCAGAACACTATGCAGTAGCAATCAAGATCGCAGACG
AAGCGTTGAGAGATGATGACGGTAATCTGCCAAATGATTTCGGAAACTCT
GATGAGTATGATGCAAAGCGTATAACATCTGCAGTGCTGGACGACCCGTC
TGGCTTGCAGCGCTTAGCTTTGGACGAATACGCTAAGAGCCTTGAACTAC
GTGGAAGGGGATCATTGTACGAAACTGTGAAGCTCATCGCAAGCGAGTTC
AAGGGGTCATTTAAGGACTGGCGTGTTCCACTAGCGTCTCCGGAACCGGA
AGCCACGTTCTATCTCTCTACCGGGGCGGACCCGCTGACAATTCGTATCG
GAGGTCCTGTAACGGCAACTAATTGCTTGATTCGCACTCGACCTAGAGAT
GGGTCGGTGGTGGGGATTGCATGTCGACTACCGCACGATCTGAGAGGATT
TATTCGGGGGAGAGACTTTTCAGAAAAGGAAGGGATGTCTAGAGGTGAAT
ACAAACGCTTAGTTCCTGATGGCTCCTCCCTTTCGTGTCGAATTCTTGGG
TTTAACTATGAAAGACTTGAAGTAATGCTGACTGCGAGATCGGACGTTCT
GAAGAATCCAACTGGAATCAAAGGATACATGGAACTAGTGAACAAAGATG
ACGACGCTTTCAGACCATATCCTCAAATCGATGGCCTCAGCATAAGTGGG
AGGAAGACACTAGAAGGTACTGCGGCATCAATCTCAGGTGACGCGAGAGG
GCGAAAGAATTTGAATAGGACAATGTCGCAGTTGCGAGCAAGAGCGAGGC
CAGTAGTGCAGCATCCTTTGTTCCACGACATTCCTGGAGAGACCGCCATT
GAGCAGCTGAAGGGAAGACTTCCCGGGGATATTATAATACGACCTAGTCA
ATACAGGACGGATGGCATTGTTTTCTCGTGCAAGTTCGCTTCACAGTTGG
GTGACGCAGATTCTCGGAAGGGAATCTTTCACGTTGACTGTCGGATGGAT
TATGATCCCGATGATGATTCTGTACCGGTCAGGTTACGTATCGAAGATAA
CATATATGAAGACGTCGAGCAAGTGCTGGAACAATATCTGCGCCCAATTA
TATCTAATCTGACGGAGAGCTTGGACCACCGCAAGTTTAAGCATGGGGAT
ACGGAATCTTTGCAAAACTACGTCTCTGTGACTAAGAGGGATAACCCGAA
GTGCATATCTTACGTTATTGGGCTCTCTGATCGAAGACCAGGTCATTTGG
TCATAGTTTACATACCTGGGGAAAAAACTGTCGCATCCGAGGAAATTCGA
GTTGTCCCAGATGGCTACAAACTACGATCGATTCTGCATAAGAACTTGGA
CGTGCTGACTGCTTGGTTTAAGTTGAACATGCGGAATGTTGCTACTGTGA
GAAAACCGGCTTCTTCTGCCTTTCCTGCATCGCCATTCATAACGGCCTCA
CCTCATGCGCATGCAAGGTCTCCGTTTATCTCAGCAATAGGAACACCCGC
TTTCCAAGGAGCCAAGTCTCCCTTCCAAAGTGGAGCAAAGTCTCCCTTCC
AAAGCGGAGTAAAGTCTCCGTTTCTTGGAGCAGCGAAGTCTCCTTTCCAA
GCAGGTTCTCGATCTCCGCATCCTAACACCGCTCGTTCTCCTTATGCTGG
TGCGCGGTCGCCGTATGCTGTTCCACGTCGTTCGGGTATCACGGCGGCGA
CGCCTGCCACAGACGAGCCGGCGCCACCTGCACCTCTCACTAATTCCAAC
TATGTCGAcccatataggtatgcagcgcccgcacgtga back to topCoding sequence (CDS) from alignment at NODE_2313_length_6108_cov_14.596310:717..6054+ >Gcaud2080.t1 ID=Gcaud2080.t1|Name=Gcaud2080.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=5166bp|location=Sequence derived from alignment at NODE_2313_length_6108_cov_14.596310:717..6054+ (Gracilaria caudata M_176_S67 male) CCTCGTTTATTCGCTGCGGCCATCCGTGCTGACCATCGTGCCATTTCCGA CAACGAAGGATTGTTTGAAGACGAGGCGAGAGCTGAAAACCCAGAAGAAC AAAAATTCGAGGACTCCAGTgaggaagaagaggatgaggacaactacgag aaggacgactacatcgtcgacgacgaaggcgacgaTATAGGAGATGAAGA TGGCCTAGCAGCCCCTGTCCCGCATCTTGATGACAGCGCTTTCCGTGACG TGCGGCGAAAGAAGAAGAAGAAGCGACGCCGTCACCGCGAAGATTCTCCA GAACTGGCTGAGGGGATCTGCAACTGCGCTTCGGACGAAGAGGAAAACGC TTTTGTGGACGACGTGAGAGTCTTTGTGGATGACGATGAAAACATGTACG AAGATCACAGACGCTCGGCCATTGAACCCGTCGATTATGAAGACGATATG GATGAATTCATCGACGACGGCGGTAGAAAGAAAAAGAAGGCTGCCGAGCG CGAAGGCCTCCTAAGTTCAGAAACTGTTCGACACGCCCGCTCAATCTTCG GAGATGCAGAGGAAATGACTCAGTACAAGGGCGCCGGCAAACTTTTCAAG CAGAATAGAGATGGTGGTGACGAAGACGATGAAGACTTCGTTGCAGAAAA AGACGTTGGGGAAAGCGAACGGCCGCTGCGTAGAATTCAGGACCGTGATA GCGATTTAGACGATTTTGAAGACGACTTGCCAGAACAGGACACTGTACGC AGAGATCCGGCAGGGGAAACAATAACCAAGGAACTCACAGCTCCAAAAGA CGGCTCAGAGAAATTGACAAGGATTGTCACTACTGATATACCTGAACAGC TTGAGAATCACTTTGGACCAGACTACAAGGCTCCAACAGAACTCGAAATC CAAGACGAAGCGGAATGGATATATCGTTTCGGTTTCCAAGAGAACCCTTT GTTTGCGGATATAACACGCTTCCCGGCGTCTGAAGTCAAAAAGCGTATTG TTGTTGTGTTATCGTACATTCACATTGACAACCTCGACATTCCTTTTATT GCTATGTACAGGAAAGATTATACTACTCCATACCTTGTGCAATCAGCGGG AGAAGTACTTCGAGATTTCAACCAACGGTCAAGCGCATACAAAAGTGAAC CTATGCCACCTCCACGTGGTTTCAATTCTCTTGTGCACGAAGACCTCGGT ATTCAATGTTCATTTGACCATAAGCGAGGAGTTCCTGCTGGATATCATGA TGGATTTGGAGACTGGAGTACATTGTGGCATATACTGGATCTGGACAAGC GATACTGGACTATTCAGAAACTCAAGAAAACTGTTATTCGTGCAGCCGAT GAAGCTGGTGATAATGGTATTCCCGACACTGTTATTGAAAATGTCAAAGC CATGGCTCTTATGGCAGAAGTTGAACAGTCCCTTAGAGACGCTGAGAAGT ATTTGCGTCTTGAGCTCCAACGTCAAGAAGCGCTGAAGAAGCAAGACGAC ATGAAGTACTTAAATGGAGGATCAGGATCGAATAAGCGTGCGGTAAAGAG GAAAAACAAATACTCTGACTATTGCGCTCGTGGTTATCGCGATCTGGCTC GAGAGTTCGGGCTTACAGCCAGACAGGTTGGAGAGAATCTGAAGGGAGCT GCGGAATACGGCGGAAGCGTGCAAGTACACGTTCCGCTTGAAGCAGATGA CGAACCGATGTCAATAGCGACAAGGTATGCCATCAGCCTAGAGGATAATC TGAGTTTGCAGTCGGAGGCGGATAATGATAGACTGGCGATAGCAGCTGGA AGAATCTTGTACGCTGCTCGGTATGTTCTAATGACTGAGATTGTTGCTGA CATGACCGTGGTGCAGACGGCACGGAAGTTTATATGCAAACCAGGGACAG TGTCGATCACGACCACTCCAACACCTCAAGGAATTACCCAAGTCGGAGAG AATCATCCCTTACGATCGGTAACGAGCTTGTTCGAGAAGAAACTTGAGAG CTTTGCCAATACGTCTGACTATGTTCTGGTCAAGCGAGCTGTGGAACTTG GGTTCACAGAGATGGAGATCAATCTTCAACCCGAGGCAATTAATGCGTTC GAACGAATGCTGAGCTCGGCATTTCTCGTATCGGAGCTTGAAATCATTTC ACCGCTTGTAGAGAAATGGAACAAGGAGAGGCTTCTCATCGTGGATGAGG TGAAGTCAGCTTTGGTCAAGCAAATGAAGGAGGAAGTTGAACTCGAACTT CGTGAAAATACTGCAGTTGTTCTCAGGCACAAAATATGCAATGCTGCCTC TCGTCGTTTTCTACTTGGACCGAGTATGCCAAACCCAGCTGATGATGCAT GTCCTAGAGTCCTGGCTTTCTGCGTCACTTCCGAGGATGATGAAGAGGCA GATCCCCTACAGGTTGCAAAAGACACCGAGACCGCAAAGGAGAAAAGTCA GAGGAACTCATATCAGCGTCTGGCTCGTGAACGGATAACTGTCGCTGAAC TGGACGAGAATGGCGAGTATCAAAACGGCTATGAGCTCTTTGCAGGATGG CTTCGACGACCATTTCGTGGTAATGAAGCGGAGCTTCCTGTACCGGTGAA GGATCAAATAAGGAGTTTCATCACTAGGGCTCGCGCCCAAACACTGGTTA TAGGTTTGGGCAGCGGTGGTCGCGGAGCTTTGCGGCTTCAGGAAGATCTC GTAAGTATATTGGCCGAAATGGCCTACGCCAAACCAAACGAAGACGGAGA AGAACCTATTAGACCAGCGATGCTTTCAGGTGCAGAAGTTAGACAAATTC AAAGGATTCATGACGACGGCGCGAGGCCAGAGTTCGATGCCAAACAGGCG TTTAAGCGCCTTATTGGACCTTATGTCGTTTGCGTTGACGAATTTCCAGC CAGAATATATGCGAAGACGAAATGGATTGATTGCGGTTTGAATGTAGATG CCTTGACCCTTTTGGAAAAGAGGGCAATAGGACTTGCTCGACTAGCCCAA GAACCTCTGTGGGGTTTTGGCTCTATTGGGCATGAAGTTGAACATGCTCT ACATCTGAAGTTTCACCCGCATCACTACTTTGCCAAGCCAAGTGACCGGG TTTTGGGCTTGCGCCGAGCTCTGTATCGTGCGGTTTGTGCCAATGGTGTT GATATTAACAGAACCCTCCGCATTCCGCACACGCAGGTTCTGGTTGGATA TGTAGGAGGGCTAGGTCTGCACAAGGGGAGAGCCCTTGTGAAGTCATTAG AACACATGCTAAGCGAGGAAGATCACGGACTGTTCTCCAGAAAGCATTTA TGGTCACAGAATTACATCGGAAAGACTGTCTTTATATCCGCAGCCGCGTT CCTTCGCATCAGAGATCCGGAACTGCACTCTGGTGGCAGCACTAAACGTG CCGCAGAATTGAGACGAAACAGGTTCAACCGGAAATCGCGGGGAAGGAGA AGAGACGAAGATGACGATGGCATATACGATCCTATGGACGACTCCCGCGT TCATCCAGAACACTATGCAGTAGCAATCAAGATCGCAGACGAAGCGTTGA GAGATGATGACGGTAATCTGCCAAATGATTTCGGAAACTCTGATGAGTAT GATGCAAAGCGTATAACATCTGCAGTGCTGGACGACCCGTCTGGCTTGCA GCGCTTAGCTTTGGACGAATACGCTAAGAGCCTTGAACTACGTGGAAGGG GATCATTGTACGAAACTGTGAAGCTCATCGCAAGCGAGTTCAAGGGGTCA TTTAAGGACTGGCGTGTTCCACTAGCGTCTCCGGAACCGGAAGCCACGTT CTATCTCTCTACCGGGGCGGACCCGCTGACAATTCGTATCGGAGGTCCTG TAACGGCAACTAATTGCTTGATTCGCACTCGACCTAGAGATGGGTCGGTG GTGGGGATTGCATGTCGACTACCGCACGATCTGAGAGGATTTATTCGGGG GAGAGACTTTTCAGAAAAGGAAGGGATGTCTAGAGGTGAATACAAACGCT TAGTTCCTGATGGCTCCTCCCTTTCGTGTCGAATTCTTGGGTTTAACTAT GAAAGACTTGAAGTAATGCTGACTGCGAGATCGGACGTTCTGAAGAATCC AACTGGAATCAAAGGATACATGGAACTAGTGAACAAAGATGACGACGCTT TCAGACCATATCCTCAAATCGATGGCCTCAGCATAAGTGGGAGGAAGACA CTAGAAGGTACTGCGGCATCAATCTCAGGTGACGCGAGAGGGCGAAAGAA TTTGAATAGGACAATGTCGCAGTTGCGAGCAAGAGCGAGGCCAGTAGTGC AGCATCCTTTGTTCCACGACATTCCTGGAGAGACCGCCATTGAGCAGCTG AAGGGAAGACTTCCCGGGGATATTATAATACGACCTAGTCAATACAGGAC GGATGGCATTGTTTTCTCGTGCAAGTTCGCTTCACAGTTGGGTGACGCAG ATTCTCGGAAGGGAATCTTTCACGTTGACTGTCGGATGGATTATGATCCC GATGATGATTCTGTACCGGTCAGGTTACGTATCGAAGATAACATATATGA AGACGTCGAGCAAGTGCTGGAACAATATCTGCGCCCAATTATATCTAATC TGACGGAGAGCTTGGACCACCGCAAGTTTAAGCATGGGGATACGGAATCT TTGCAAAACTACGTCTCTGTGACTAAGAGGGATAACCCGAAGTGCATATC TTACGTTATTGGGCTCTCTGATCGAAGACCAGGTCATTTGGTCATAGTTT ACATACCTGGGGAAAAAACTGTCGCATCCGAGGAAATTCGAGTTGTCCCA GATGGCTACAAACTACGATCGATTCTGCATAAGAACTTGGACGTGCTGAC TGCTTGGTTTAAGTTGAACATGCGGAATGTTGCTACTGTGAGAAAACCGG CTTCTTCTGCCTTTCCTGCATCGCCATTCATAACGGCCTCACCTCATGCG CATGCAAGGTCTCCGTTTATCTCAGCAATAGGAACACCCGCTTTCCAAGG AGCCAAGTCTCCCTTCCAAAGTGGAGCAAAGTCTCCCTTCCAAAGCGGAG TAAAGTCTCCGTTTCTTGGAGCAGCGAAGTCTCCTTTCCAAGCAGGTTCT CGATCTCCGCATCCTAACACCGCTCGTTCTCCTTATGCTGGTGCGCGGTC GCCcgcccgcacgtga back to top
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