Gcaud7590.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7590.t1
Unique NameGcaud7590.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length159
Homology
BLAST of Gcaud7590.t1 vs. uniprot
Match: R7Q413_CHOCR (Iron-sulfur cluster assembly protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q413_CHOCR)

HSP 1 Score: 235 bits (599), Expect = 4.090e-77
Identity = 116/149 (77.85%), Postives = 129/149 (86.58%), Query Frame = 0
Query:    1 MIRTTATALNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQ 149
            M R +  A+ + + +   + A  +R YHDKVIDHYENPRNVGS+DK DKNVGTGLVGAPACGDVMKLQIRVN DGEIV++AFKTFGCGSAIASSSLATEWVKG NVDDA+ IKNSDIAKEL LPPVKLHCSMLAEDAIKAAI +LKEK+
Sbjct:    1 MQRLSVAAVTKARHAVRPSYASAARAYHDKVIDHYENPRNVGSMDKNDKNVGTGLVGAPACGDVMKLQIRVNNDGEIVETAFKTFGCGSAIASSSLATEWVKGMNVDDARKIKNSDIAKELSLPPVKLHCSMLAEDAIKAAIANLKEKR 149          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A2V3J4R9_9FLOR (Iron-sulfur cluster assembly protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R9_9FLOR)

HSP 1 Score: 234 bits (598), Expect = 5.800e-77
Identity = 120/158 (75.95%), Postives = 135/158 (85.44%), Query Frame = 0
Query:    1 MIRTTATALNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTDGAPSS 158
            M R  A +++R +      + ++ R Y DKVIDHYENPRNVGSL+K DKNVGTGLVGAPACGDVMKLQIRV+E+GEI++SAFKTFGCGSAIASSSLATEWVKGRNV+DA  IKNSDIAKELKLPPVKLHCSMLAEDAIKAA+KDLK KQ+    APSS
Sbjct:    1 MNRIAAASISRARGPFRSTIGRQIRKYDDKVIDHYENPRNVGSLNKNDKNVGTGLVGAPACGDVMKLQIRVDENGEIIESAFKTFGCGSAIASSSLATEWVKGRNVNDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAVKDLKTKQDTF--APSS 156          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A5B8MHW8_9CHLO (Iron-sulfur cluster assembly protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHW8_9CHLO)

HSP 1 Score: 221 bits (563), Expect = 1.330e-71
Identity = 104/128 (81.25%), Postives = 114/128 (89.06%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQER 151
            SR YH+KVIDHYENPRNVGS DK DKNVGTGLVGAPACGDVMKLQI+V++DG I+DS FKTFGCGSAIASSSLATEWVKGR +DD   IKN DIAK L LPPVKLHCSMLAEDAIKAA+KDL+ K ++
Sbjct:   31 SRLYHEKVIDHYENPRNVGSFDKNDKNVGTGLVGAPACGDVMKLQIKVDDDGNIIDSCFKTFGCGSAIASSSLATEWVKGRTLDDVVEIKNQDIAKHLSLPPVKLHCSMLAEDAIKAAVKDLRAKNKK 158          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A7S3BYI5_9VIRI (Iron-sulfur cluster assembly protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYI5_9VIRI)

HSP 1 Score: 223 bits (568), Expect = 1.410e-71
Identity = 103/129 (79.84%), Postives = 120/129 (93.02%), Query Frame = 0
Query:   21 AKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQ 149
            A+ +R YH KV+DHYENPRNVGS D+ED NVGTGLVGAPACGDVMKLQI+V++DGEIVDS FKTFGCGSAIASSS+ATEW+KG++V++A  +KNSDIAKELKLPPVKLHCSMLAEDAIKAAI D+K+K+
Sbjct:   75 ARAARAYHQKVVDHYENPRNVGSFDREDPNVGTGLVGAPACGDVMKLQIKVDDDGEIVDSCFKTFGCGSAIASSSVATEWIKGKSVEEASGVKNSDIAKELKLPPVKLHCSMLAEDAIKAAIADVKQKK 203          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A2L2Y2C8_PARTP (Iron-sulfur cluster assembly enzyme ISCU, mitochondrial (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y2C8_PARTP)

HSP 1 Score: 219 bits (558), Expect = 4.980e-71
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 0
Query:    9 LNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTD 153
            + R  + A+ + +K +  YH KV+DHYENPRNVGSLDK+DK VGTGLVGAPACGDVMKLQI+V+E+G+I+D+ FKTFGCG+AIASSSLATEWVKG+NV+DA  IKNSDIAKEL LPPVKLHCSMLAEDAIKAA+KD K KQ+  D
Sbjct:    2 ITRNHSPALYSASKAT--YHHKVVDHYENPRNVGSLDKDDKQVGTGLVGAPACGDVMKLQIKVDENGKIIDAKFKTFGCGAAIASSSLATEWVKGKNVNDALGIKNSDIAKELCLPPVKLHCSMLAEDAIKAALKDYKIKQDAKD 144          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A6S7FGP8_PARCT (Iron-sulfur cluster assembly scaffold n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FGP8_PARCT)

HSP 1 Score: 219 bits (559), Expect = 5.960e-71
Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 0
Query:   15 SAIRALAKRSRC--------YHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQE 150
            +++R L    RC        YH KVIDHYENPRNVGS+DK+D NVGTGLVGAPACGDVMKLQI+V++DG+IVD+ FKTFGCGSAIASSSLATEWVKG+NVDDA  IKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+E
Sbjct:    8 NSVRILRSIPRCREAVVSAGYHAKVIDHYENPRNVGSMDKDDDNVGTGLVGAPACGDVMKLQIKVSDDGKIVDAKFKTFGCGSAIASSSLATEWVKGKNVDDALKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALNDYKVKKE 151          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A7M7PGF3_STRPU (NifU_N domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PGF3_STRPU)

HSP 1 Score: 219 bits (559), Expect = 6.160e-71
Identity = 103/132 (78.03%), Postives = 120/132 (90.91%), Query Frame = 0
Query:   24 SRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTDGA 155
            S  YH  VIDHYENPRNVG++DK DKNVGTGLVGAPACGDVMKLQI+V++DG+IVD+ FKTFGCGSAIASSSLATEW+KGR+VD+AK+IKN+DIAKEL LPPVKLHCSMLAEDAIKAA++D + KQ+  + A
Sbjct:   29 SASYHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQIKVDDDGKIVDAKFKTFGCGSAIASSSLATEWIKGRSVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAALQDYRVKQDSKEAA 160          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A8C6F6I9_MONMO (Iron-sulfur cluster assembly enzyme n=5 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8C6F6I9_MONMO)

HSP 1 Score: 219 bits (558), Expect = 1.030e-70
Identity = 111/154 (72.08%), Postives = 125/154 (81.17%), Query Frame = 0
Query:    1 MIRTTATALNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTDG 154
            M R T+  L R     +R L+  +R YH KV+DHYENPRNVGSLDK  KNVGTGLVGAPACGDVMKLQI+V+E G+IVD+ FKTFGCGSAIASSSLATEWVKG+ V++A  IKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K KQE   G
Sbjct:    9 MRRATSALLLRALRLPVRELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADFKLKQEPKKG 162          
BLAST of Gcaud7590.t1 vs. uniprot
Match: U6J684_ECHGR (Iron-sulfur cluster assembly enzyme ISCU n=2 Tax=Echinococcus TaxID=6209 RepID=U6J684_ECHGR)

HSP 1 Score: 219 bits (557), Expect = 1.120e-70
Identity = 102/129 (79.07%), Postives = 118/129 (91.47%), Query Frame = 0
Query:   27 YHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTDGA 155
            YH+KV+DHYENPRNVGSLDK D++VGTGLVGAPACGDVMKLQI+V+ +G IVD+ FKTFGCGSAIASSSLATEWVKG+ +D+A  IKN+DIAKEL LPPVKLHCSMLAEDAI+AAI DLKEKQ++  G+
Sbjct:   25 YHEKVLDHYENPRNVGSLDKNDRHVGTGLVGAPACGDVMKLQIKVDNEGRIVDAKFKTFGCGSAIASSSLATEWVKGKTIDEASTIKNTDIAKELCLPPVKLHCSMLAEDAIRAAISDLKEKQQQNSGS 153          
BLAST of Gcaud7590.t1 vs. uniprot
Match: A0A340WHW7_LIPVE (iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=18 Tax=Eutheria TaxID=9347 RepID=A0A340WHW7_LIPVE)

HSP 1 Score: 218 bits (556), Expect = 2.080e-70
Identity = 110/154 (71.43%), Postives = 125/154 (81.17%), Query Frame = 0
Query:    1 MIRTTATALNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEWVKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQERTDG 154
            M R T+  L R     +R L+  +R YH KV+DHYENPRNVGSLDK  KNVGTGLVGAPACGDVMKLQI+V+E G+IVD+ FKTFGCGSAIASSSLATEWVKG+ V++A  IKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D + KQE   G
Sbjct:    9 MRRATSALLLRAPRLPVRELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADFRLKQEPKKG 162          
The following BLAST results are available for this feature:
BLAST of Gcaud7590.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q413_CHOCR4.090e-7777.85Iron-sulfur cluster assembly protein n=1 Tax=Chond... [more]
A0A2V3J4R9_9FLOR5.800e-7775.95Iron-sulfur cluster assembly protein n=1 Tax=Graci... [more]
A0A5B8MHW8_9CHLO1.330e-7181.25Iron-sulfur cluster assembly protein n=1 Tax=Chlor... [more]
A0A7S3BYI5_9VIRI1.410e-7179.84Iron-sulfur cluster assembly protein n=1 Tax=Prasi... [more]
A0A2L2Y2C8_PARTP4.980e-7173.79Iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]
A0A6S7FGP8_PARCT5.960e-7175.00Iron-sulfur cluster assembly scaffold n=2 Tax=Para... [more]
A0A7M7PGF3_STRPU6.160e-7178.03NifU_N domain-containing protein n=3 Tax=Echinacea... [more]
A0A8C6F6I9_MONMO1.030e-7072.08Iron-sulfur cluster assembly enzyme n=5 Tax=Boreoe... [more]
U6J684_ECHGR1.120e-7079.07Iron-sulfur cluster assembly enzyme ISCU n=2 Tax=E... [more]
A0A340WHW7_LIPVE2.080e-7071.43iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPFAMPF01592NifU_Ncoord: 27..150
e-value: 1.0E-54
score: 184.1
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPANTHERPTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGcoord: 3..154
IPR002871NIF system FeS cluster assembly, NifU, N-terminalCDDcd06664IscU_likecoord: 27..141
e-value: 1.42546E-47
score: 148.552
NoneNo IPR availableGENE3D3.90.1010.10coord: 26..155
e-value: 5.7E-51
score: 174.0
NoneNo IPR availablePANTHERPTHR10093:SF16IRON-SULFUR CLUSTER ASSEMBLY ENZYME ISCU, MITOCHONDRIALcoord: 3..154
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 26..150
IPR011339ISC system FeS cluster assembly, IscU scaffoldTIGRFAMTIGR01999TIGR01999coord: 27..150
e-value: 7.2E-68
score: 224.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_226_length_35554_cov_4.545132contigNODE_226_length_35554_cov_4.545132:22527..23083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7590.t1Gcaud7590.t1Gracilaria caudata M_176_S67 malemRNANODE_226_length_35554_cov_4.545132 22527..23083 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7590.t1 ID=Gcaud7590.t1|Name=Gcaud7590.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=159bp
MIRTTATALNRGQTSAIRALAKRSRCYHDKVIDHYENPRNVGSLDKEDKN
VGTGLVGAPACGDVMKLQIRVNEDGEIVDSAFKTFGCGSAIASSSLATEW
VKGRNVDDAKNIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKEKQE
RTDGAPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002871NIF_FeS_clus_asmbl_NifU_N
IPR011339ISC_FeS_clus_asmbl_IscU