Gcaud2277.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2277.t1
Unique NameGcaud2277.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length652
Homology
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BLAST of Gcaud2277.t1 vs. uniprot
Match: A0A2V3IT18_9FLOR (IPT/TIG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT18_9FLOR)

HSP 1 Score: 791 bits (2042), Expect = 5.930e-268
Identity = 392/617 (63.53%), Postives = 486/617 (78.77%), Query Frame = 0 
Query:   32 LDSYRQLATIPPVGISVESQSEVSFFLVNGESDELVVSFVFMPPSGSSPEEFVLSFGCESSVVLFNDSCTITNTVSTIVGTDATAFNTTVACTFEGFPATTSCSLTATSIARQLLQFESDEVPVNVYGIVLYEPDEQGEVSENARIISGYANSYELETYDREDQGVREIQSYGVLPDNIIFEGSNGISFLNLASVSVIADDQVFWFNISACSITGSSYDSSGIVLDNPTQCGLSFAARGEDVFPTFGAHFRPYKSGKFTLQLNWDSIGTSDEPYEQAVVFSVVERAPPVITGISKLSNYQSLPCGVETLNITGYNFRFSDKRELLTNNEDGSVSVWPEVEDLFSHNEGEDVSFLSFESSGGVGKDVSFNVIVFYGSESENAVTLQDD--TLFTTNFSTPPVLLSLAPNVTEPEGGTRIILNGVFDGFKTSSLVRVGGFDVRGSDVEIAEDGSLAFLAPSLSSLGKQFTYDVSVAVCAERSGSLPLIYNVAPMVLITAADSSTNDDSSYVIPYDGEVTFVAEVSANNVNVTYLWSLVNADGNAVSLGNSTVNEQIFIVTPDMIRPSGTPYSLRVIVTNSIGLTDNSDVAIVLANPVDEYILVNVFEIETLQRSLNTTT 646
            L + RQL +IPPVGISV SQSE  F+L+NGES+ELV +F+FMPPS SSPEE+V+SFGCES +VLFNDSC+ITNT+S IVGT+ATA+NTTV CTFE FPA T C+LTATS+ARQL QF S+ +P NVYGIV Y PD+ G VS++A I+SGYAN+YEL +YDRE QG+R+I SYG+ P    + GS+GISFL LA+VSV+ DD +F +N+S CSITG+++ S  +VLDN  +CGL  A   E  FP  GA FRPYKSGKFTLQLNWD+IGT+ E YEQA+VFSVVERAPPVIT + K S YQSLPCG ETLN+TG+NFR SDKRELL +NEDG++SVW    D F +++  D S    ES GGVG++V F +   YGS+  +AV LQDD  +LF+ +FSTPP LL + PNV+EPEGG+RI+L G FDGFK +S++R+GGF++RGSDV+I+    LAF +P LS+LGKQF+Y+V V VCAERS   PL+YNVAP++ ITAADSSTN+++SYVIPYDGE TFVAEVS NN   +YLW L++ DG  + L N+T+ EQIF VT DMI PSGTP+ L+  V NS+GL+D S V I LA PV E+ILVNVFE+E L RSLN+TT
Sbjct:   45 LGTSRQLNSIPPVGISVVSQSETDFYLINGESEELVANFIFMPPSDSSPEEYVMSFGCESDIVLFNDSCSITNTISDIVGTEATAYNTTVVCTFERFPAETFCTLTATSVARQLQQFPSESLPANVYGIVFYTPDQDGGVSKDAIIVSGYANTYELASYDRELQGLRDIPSYGIFPAGTAYTGSDGISFLGLATVSVVVDDYIFRYNVSECSITGAAFISGTLVLDNSGECGLGMAVSSETAFPILGAQFRPYKSGKFTLQLNWDTIGTTGEVYEQAIVFSVVERAPPVITSVEKQSIYQSLPCGTETLNVTGFNFRLSDKRELLASNEDGTLSVWQGKPDSFLYDQLTDSSSFVLESVGGVGRNVPFTIRALYGSDFVDAVYLQDDASSLFSLDFSTPPELLGITPNVSEPEGGSRIVLVGTFDGFKATSVIRIGGFEIRGSDVQISSSSELAFTSPPLSALGKQFSYNVLVEVCAERSEPFPLMYNVAPLLTITAADSSTNEETSYVIPYDGEATFVAEVSENNNGASYLWQLLSTDGEEIPLENTTLTEQIFTVTADMISPSGTPFILQATVQNSVGLSDTSQVTIELATPVVEFILVNVFEVEVLTRSLNSTT 661
The following BLAST results are available for this feature:
BLAST of Gcaud2277.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT18_9FLOR5.930e-26863.53IPT/TIG domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..651
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2244_length_6318_cov_4.442749contigNODE_2244_length_6318_cov_4.442749:4269..6295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2277.t1Gcaud2277.t1Gracilaria caudata M_176_S67 malemRNANODE_2244_length_6318_cov_4.442749 4269..6295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2277.t1 ID=Gcaud2277.t1|Name=Gcaud2277.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=652bp
MVSISFIVMVLSFFFDAGTAALQHPSFFPPTLDSYRQLATIPPVGISVES
QSEVSFFLVNGESDELVVSFVFMPPSGSSPEEFVLSFGCESSVVLFNDSC
TITNTVSTIVGTDATAFNTTVACTFEGFPATTSCSLTATSIARQLLQFES
DEVPVNVYGIVLYEPDEQGEVSENARIISGYANSYELETYDREDQGVREI
QSYGVLPDNIIFEGSNGISFLNLASVSVIADDQVFWFNISACSITGSSYD
SSGIVLDNPTQCGLSFAARGEDVFPTFGAHFRPYKSGKFTLQLNWDSIGT
SDEPYEQAVVFSVVERAPPVITGISKLSNYQSLPCGVETLNITGYNFRFS
DKRELLTNNEDGSVSVWPEVEDLFSHNEGEDVSFLSFESSGGVGKDVSFN
VIVFYGSESENAVTLQDDTLFTTNFSTPPVLLSLAPNVTEPEGGTRIILN
GVFDGFKTSSLVRVGGFDVRGSDVEIAEDGSLAFLAPSLSSLGKQFTYDV
SVAVCAERSGSLPLIYNVAPMVLITAADSSTNDDSSYVIPYDGEVTFVAE
VSANNVNVTYLWSLVNADGNAVSLGNSTVNEQIFIVTPDMIRPSGTPYSL
RVIVTNSIGLTDNSDVAIVLANPVDEYILVNVFEIETLQRSLNTTTRKIC
C*
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