Gcaud2154.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2154.t1
Unique NameGcaud2154.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length111
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2154.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2212_length_6431_cov_4.444479contigNODE_2212_length_6431_cov_4.444479:857..1189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2154.t1Gcaud2154.t1Gracilaria caudata M_176_S67 malemRNANODE_2212_length_6431_cov_4.444479 857..1189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2154.t1 ID=Gcaud2154.t1|Name=Gcaud2154.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=111bp
MKTVSAIVFALIGFAAAVPTTVAPTTAPPATTMTPTPAPMLHKPDVLVTL
PDGTAGKSTGDNAVVAAANKHAGAAGASNDGDGAAAAAAGPGGAVGLAAD
LPFFFPTPSA*
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