Gcaud2242.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2242.t1
Unique NameGcaud2242.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length415
Homology
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BLAST of Gcaud2242.t1 vs. uniprot
Match: UPI001E1D485D (protein DEK-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D485D)

HSP 1 Score: 81.3 bits (199), Expect = 5.330e-13
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 0 
Query:  130 GRGEKLCNIPNILYNIDKAHSKDAEIEFLHRLLFNFVGSAHTRKSNIRSFSGFMFASEKDRNRVRDKLLRAHLNMVRKMAKFLDVP---VNKP 219
            G G  L  IPN+ + ++ A  +D E+  LHRL+ N  G A  RKSNIR FSGF F S+KDR+R++ KL +  + ++R++A+ LD+P   V KP
Sbjct:   59 GNGVALGQIPNVSFLLNNAKGRDDELILLHRLVLNSAGVATKRKSNIREFSGFAFDSDKDRDRIKQKLSKEPIALIRRVAQLLDLPNVSVTKP 151
The following BLAST results are available for this feature:
BLAST of Gcaud2242.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E1D485D5.330e-1345.16protein DEK-like n=1 Tax=Mercenaria mercenaria Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..382
IPR044198Protein DEKPANTHERPTHR13468DEK PROTEINcoord: 61..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2174_length_6571_cov_4.069753contigNODE_2174_length_6571_cov_4.069753:4851..6095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2242.t1Gcaud2242.t1Gracilaria caudata M_176_S67 malemRNANODE_2174_length_6571_cov_4.069753 4851..6095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2242.t1 ID=Gcaud2242.t1|Name=Gcaud2242.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=415bp
MKLESTVSSSDCAAHSSPSLANGSSSQYAGQNGVPDKTPQPLKRNGLTSS
SAKRPKRPCEAEQPTDTLTTNESETDARQTASQADAVDSASTSTQRRPLG
TRKRRKTRMFEIAAPTHVRRVSTGALGVTGRGEKLCNIPNILYNIDKAHS
KDAEIEFLHRLLFNFVGSAHTRKSNIRSFSGFMFASEKDRNRVRDKLLRA
HLNMVRKMAKFLDVPVNKPHPPSNEANGEPVLNAGTDANASDPSQPSPAL
NADKRALLSEAMGMDDDEISETCRDVKAVNAKRNPSQKNVRETTMTAGKD
DLVRVLLEFLEMPRVIEGRGSLAERDKELRRQKKAAEKAAEKARAEKAAL
KKAAERKAALMKKKEVRESDEDGDEDLETGGTTWIELAKQWKEAKAREES
ASKRNGFLTTNGHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044198DEK