Gcaud2240.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud2240.t1
Unique Name	Gcaud2240.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	112

Homology

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A517L1Y6_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517L1Y6_9PEZI)

HSP 1 Score: 90.1 bits (222), Expect = 2.640e-20
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 0

Query:    2 VKRVKVESEAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLVA 109
            +K +    E + +IS     +   YADWCGPC+ + P+FE + + +  S PGK AF KVN+D   D   K  V+++P FL++  G +  TIKGAN   +R+ +S   A
Sbjct:    4 IKHISSAGEFQKLISSNVCVITDFYADWCGPCKAIAPIFEQLATSH--SQPGKVAFAKVNVDNQPDIAQKYSVTAMPTFLIFKNGSVCDTIKGANISALRQAVSKAAA 109

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A8H3V8J6_VENIN (Thioredoxin domain-containing protein n=2 Tax=Venturia TaxID=5024 RepID=A0A8H3V8J6_VENIN)

HSP 1 Score: 86.3 bits (212), Expect = 8.250e-19
Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 0

Query:    2 VKRVKVESEAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTIS 105
            +  +    E + +IS     +   YADWCGPC+ + P+FE + + +  + PGK AF KVN+D   D   K GV+++P FLV+  G +  TI+GAN   +R  ++
Sbjct:    4 INHISSSGEFQKLISSNICVITDFYADWCGPCKAIAPIFEQLATSH--TKPGKLAFAKVNVDNHKDIALKYGVTAMPTFLVFKNGSVSETIRGANPSALRNAVA 105

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A4Z0Y4B0_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Xylaria hypoxylon TaxID=37992 RepID=A0A4Z0Y4B0_9PEZI)

HSP 1 Score: 84.0 bits (206), Expect = 6.760e-18
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0

Query:   10 EAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLV 108
            E + I++ + I +   YADWCGPC+M+ P FE + +++  S PGK  F KVN+D         GVS++P FL++  G +  TI+GAN   +   +   V
Sbjct:   12 EWQRILASSTIVITDFYADWCGPCKMIAPTFESLSTKF--SKPGKITFCKVNVDNHQSIAQSHGVSAMPTFLIFKNGSVVETIRGANPPSLTAAVEKAV 108

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A5N5D6Y3_9PEZI (Thioredoxin n=4 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A5N5D6Y3_9PEZI)

HSP 1 Score: 83.6 bits (205), Expect = 9.730e-18
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0

Query:   13 SIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLVA 109
            SI+S     V   YADWCGPC+ + PVFE +  +   + PG+ +F KV++D       K GVS++P FLV+  G +  TI+GAN   +R  ++   A
Sbjct:   15 SILSSNTYVVADFYADWCGPCKAIAPVFEQLAQQ--EAKPGRLSFVKVDVDAQQGVAGKYGVSAMPTFLVFKNGSVTETIRGANPAALRAAVTKAAA 109

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BLAST of Gcaud2240.t1 vs. uniprot
Match: K2RMR1_MACPH (Thioredoxin n=2 Tax=Botryosphaeriaceae TaxID=45131 RepID=K2RMR1_MACPH)

HSP 1 Score: 83.6 bits (205), Expect = 1.040e-17
Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 0

Query:   13 SIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLVA 109
            SI+S     +   YADWCGPC+++ P+FE + ++   + PG+ AF KV++D       + GVS++P FLV+  G +  TI+GAN   +R  ++   A
Sbjct:   15 SILSSNTYVIADFYADWCGPCKVIAPIFEQLAAQ--EAKPGRLAFVKVDVDAQQGIARQYGVSAMPTFLVFKNGAVSETIRGANPAALRAAVTKAAA 109

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A0D2B3X6_9PEZI (Thioredoxin n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2B3X6_9PEZI)

HSP 1 Score: 83.2 bits (204), Expect = 1.160e-17
Identity = 35/109 (32.11%), Postives = 63/109 (57.80%), Query Frame = 0

Query:    2 VKRVKVESEAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLVAK 110
            +  V   ++   ++S     V   +A+WCGPC+ + P+FE + + +  + PGK AF KV++D+  D   + GVS++P FLV+  G +  T++GAN   +R  ++   A+
Sbjct:    4 INHVSSSAQFSKVLSSNTCVVVDFFAEWCGPCKAIAPIFEQLATSH--AQPGKVAFVKVDVDQSQDIAERYGVSAMPTFLVFKNGSVFETVRGANPSALRAAVAKASAE 110

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A086SYV0_ACRC1 (Thioredoxin-like protein-like protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086SYV0_ACRC1)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-17
Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = 0

Query:   14 IISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLVAKL 111
            I+  + I V   YADWCGPC+ + P++E +      S PG   F K+N D   D  ++  VS+LP FLV+  GK+  TI+GAN  ++++ +  LV ++
Sbjct:   17 ILKSSKIVVADFYADWCGPCKQIAPLYETLAKSL--SRPGAVTFVKINSDNNSDIASEYSVSALPTFLVFRDGKVDETIRGANPAQLKKVVEKLVTEV 112

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BLAST of Gcaud2240.t1 vs. uniprot
Match: F7VQD9_SORMK (WGS project CABT00000000 data, contig 2.4 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7VQD9_SORMK)

HSP 1 Score: 83.6 bits (205), Expect = 1.580e-17
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    5 VKVESEAE--SIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGAN 96
            VKV S  +   I+S + I V   YADWCGPC+M+ PVFE + ++Y  S P K  F K+++D   +   + GV ++P FL+   G +  TI+GAN
Sbjct:    5 VKVNSSTQWRQILSSSAIVVADFYADWCGPCKMIAPVFESLSTKY--SKPNKITFCKIDVDSQQEVAQQYGVRAMPTFLILHNGSVIETIQGAN 96

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A8H3U7S4_VENIN (Thioredoxin domain-containing protein n=2 Tax=Venturia inaequalis TaxID=5025 RepID=A0A8H3U7S4_VENIN)

HSP 1 Score: 86.3 bits (212), Expect = 1.920e-17
Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 0

Query:    2 VKRVKVESEAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTIS 105
            +  +    E + +IS     +   YADWCGPC+ + P+FE + + +  + PGK AF KVN+D   D   K GV+++P FLV+  G +  TI+GAN   +R  ++
Sbjct:    4 INHISSSGEFQKLISSNICVITDFYADWCGPCKAIAPIFEQLATSH--TKPGKLAFAKVNVDNHKDIALKYGVTAMPTFLVFKNGSVSETIRGANPSALRNAVA 105

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BLAST of Gcaud2240.t1 vs. uniprot
Match: A0A6J3M2C8_9PEZI (thioredoxin n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M2C8_9PEZI)

HSP 1 Score: 82.8 bits (203), Expect = 2.470e-17
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 0

Query:    3 KRVKVESEA--ESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEASNPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEIRRTISDLV 108
            K V V S A  +S+ + +   V   YADWCGPC+ + P+FE + +++  + PG+  F KVN+D L D  +  G+S++P FLV    K+  T++GAN   +R  +   V
Sbjct:    4 KVVNVTSSAHFKSLTASSTYVVVDFYADWCGPCKTISPIFEQLATQH--AQPGRITFVKVNVDNLRDVASNYGISAMPTFLVLKGSKVVETVRGANPTALRSAVLSAV 109

The following BLAST results are available for this feature:

BLAST of Gcaud2240.t1 vs. uniprot

BLAST of Gcaud2240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A517L1Y6_9PEZI	2.640e-20	37.96	Thioredoxin domain-containing protein n=1 Tax=Vent...	[more]
A0A8H3V8J6_VENIN	8.250e-19	36.54	Thioredoxin domain-containing protein n=2 Tax=Vent...	[more]
A0A4Z0Y4B0_9PEZI	6.760e-18	37.37	Thioredoxin domain-containing protein n=1 Tax=Xyla...	[more]
A0A5N5D6Y3_9PEZI	9.730e-18	39.18	Thioredoxin n=4 Tax=Botryosphaeriaceae TaxID=45131...	[more]
K2RMR1_MACPH	1.040e-17	37.11	Thioredoxin n=2 Tax=Botryosphaeriaceae TaxID=45131...	[more]
A0A0D2B3X6_9PEZI	1.160e-17	32.11	Thioredoxin n=1 Tax=Verruconis gallopava TaxID=253...	[more]
A0A086SYV0_ACRC1	1.380e-17	37.76	Thioredoxin-like protein-like protein n=1 Tax=Acre...	[more]
F7VQD9_SORMK	1.580e-17	41.49	WGS project CABT00000000 data, contig 2.4 n=1 Tax=...	[more]
A0A8H3U7S4_VENIN	1.920e-17	36.54	Thioredoxin domain-containing protein n=2 Tax=Vent...	[more]
A0A6J3M2C8_9PEZI	2.470e-17	37.04	thioredoxin n=1 Tax=Dissoconium aciculare CBS 342....	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..111
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..110 e-value: 6.4E-23 score: 82.7
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 6..105
None	No IPR available	PANTHER	PTHR10438:SF436	THIOREDOXIN-1-RELATED	coord: 6..105
None	No IPR available	CDD	cd02947	TRX_family	coord: 9..99 e-value: 1.18915E-22 score: 82.2208
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 18..104 e-value: 2.6E-17 score: 62.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..109 score: 9.96694
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 1..109 e-value: 9.9E-23 score: 76.3
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 11..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_2174_length_6571_cov_4.069753	contig	NODE_2174_length_6571_cov_4.069753:2461..2867 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2240.t1	Gcaud2240.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_2174_length_6571_cov_4.069753 2461..2867 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud2240.t1 ID=Gcaud2240.t1|Name=Gcaud2240.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=112bp
MVKRVKVESEAESIISGTPIAVGHMYADWCGPCRMMEPVFEGIESEYEAS
NPGKTAFYKVNIDELVDYTNKLGVSSLPVFLVYFQGKLHHTIKGANEVEI
RRTISDLVAKL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR005746	Thioredoxin
IPR036249	Thioredoxin-like_sf