Gcaud2375.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2375.t1
Unique NameGcaud2375.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length501
Homology
BLAST of Gcaud2375.t1 vs. uniprot
Match: A0A2V3J3Z3_9FLOR (NopRA1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Z3_9FLOR)

HSP 1 Score: 310 bits (793), Expect = 1.830e-89
Identity = 174/447 (38.93%), Postives = 260/447 (58.17%), Query Frame = 0
Query:    1 MSHSSSIVRHFGHLFTLSCCRIVQENDEYMEKPDMYLPSVDFLKQSLKKEKSGDALVQKLLGQYQLIFSKKVDKRKTILMNAAVVKSAGNILEAENSIRAGLRVAPKETVMMVMNQNLFSRLVLQACTSEDKRLSQRLWHLSADVLNHSFLFPQTTKYEAEVFLSVVSGLGKESQVCIDAIENMITTALANPYGLYDHLKMIVPLKDGASPPISLFFIAALLRIRKLKEQRKSSQGMSESDEKLFEASLVRIVGFIVASIIVLDPNTERNFSLMTSVSRFVSTDAFWWDFNNDDEPVESKAHVVRACLHLRELLHNRGTYPGTPFFTLLSSLCECFLRCSSNEHEGIKTLSELHGIDVSWDSWRELRSGEL------APYTRCCSDLETNAVQRFFLHFCTAKGISGHTVEDQLRSLKRSLPKKDYVVLFSATLRSTTFPHVRDMLL 441
            + H+S +VRH+G +FTLSCCR+V+++ + M  P++YLPS+  LKQSL+KE  GD LVQ LL QYQL+F++ ++KRKT+L+  A+  S  N+LEAE++IRA L VAP+E V M  NQ +FS+LV QA  S D  +S RLW L AD+L  SFLFP +T+ E +V+L V+S LG E+ VC   +E M++ ALANPYGL+D L  +     G +  ISL  + +L+R+RK+K + K+      +  K  E  L++I   +++   VL    E+  SL T VS     +  WW        V+ + H++ A   +++ L    T   TP+  L++S+   F++  S E +  +       +D++WD+W++  +GE       AP  R   D+ + A+  FF         S   +E QL SL++SL   DY VL    LR T   +V   LL
Sbjct:  435 LGHTSPMVRHYGVIFTLSCCRLVRKHSDAMAHPELYLPSITVLKQSLRKESKGDGLVQSLLAQYQLVFAQSMEKRKTVLIETAINASGNNMLEAESAIRAALSVAPREMVHMAFNQKIFSKLVSQAVQSRDIYVSSRLWELCADLLRSSFLFPPSTESEVDVYLFVLSSLGTEADVCAACLERMVSVALANPYGLFDQLSELSS-GSGEAATISLLSVTSLIRMRKMKVKDKAPPRKHLN--KPLEVVLLQIFSLLLSCSTVLGTAREKYESLFTIVSELAPFELKWWKSELTRHEVQQEGHLLAASSFIQKALKRSPTRYWTPYLQLMASVSSYFVQSLSTESKISRPYISSERLDLAWDAWQDFNAGESLLSHRSAPSKR---DMVSEALPSFFFPSDALDAASKSNIERQLSSLQQSLKNPDYAVLLCTILRITGPENVAPKLL 875          
BLAST of Gcaud2375.t1 vs. uniprot
Match: A0A2V3ILW3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILW3_9FLOR)

HSP 1 Score: 192 bits (487), Expect = 4.740e-55
Identity = 95/192 (49.48%), Postives = 129/192 (67.19%), Query Frame = 0
Query:  184 MITTALANPYGLYDHLKMIVPLKDGASPPISLFFIAALLRIRKLKEQRKSSQGMSESDEKLFEASLVRIVGFIVASIIVLDPNTERNFSLMTSVSRFVSTDAFWWDFNNDDEPVESKAHVVRACLHLRELLHNRGTYPGTPFFTLLSSLCECFLRCSSNEHEGIKTLSELHGIDVSWDSWRELRSGELAPYT 375
            MI+TAL +PYGLYDHL MI   ++ AS P+SLFF+A L RIRKL++ +    GMSES   +F A+LVRI GF++AS  VLD +T R  S++ +VS FVST  FWW      E V+ +    +ACL+L+ +L++ GTYP T F  LL+S+C CFLR SS E+  I+ L     ID++WDS RE +S E+  Y+
Sbjct:    1 MISTALGSPYGLYDHLNMIASTRNAASTPVSLFFVATLRRIRKLQDAKNHMLGMSESGHNIFRAALVRIAGFVLASRYVLDHSTMRKCSIINTVSGFVSTVKFWWHPKGFIEHVQDEEQFAKACLYLKGMLYDVGTYPETLFLVLLASICSCFLRNSSKENRCIERLFRQRDIDLAWDSSREFKSEEMGSYS 192          
The following BLAST results are available for this feature:
BLAST of Gcaud2375.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3Z3_9FLOR1.830e-8938.93NopRA1 domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3ILW3_9FLOR4.740e-5549.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..243
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..500
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2154_length_6647_cov_5.294539contigNODE_2154_length_6647_cov_5.294539:4927..6429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2375.t1Gcaud2375.t1Gracilaria caudata M_176_S67 malemRNANODE_2154_length_6647_cov_5.294539 4927..6429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2375.t1 ID=Gcaud2375.t1|Name=Gcaud2375.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=501bp
MSHSSSIVRHFGHLFTLSCCRIVQENDEYMEKPDMYLPSVDFLKQSLKKE
KSGDALVQKLLGQYQLIFSKKVDKRKTILMNAAVVKSAGNILEAENSIRA
GLRVAPKETVMMVMNQNLFSRLVLQACTSEDKRLSQRLWHLSADVLNHSF
LFPQTTKYEAEVFLSVVSGLGKESQVCIDAIENMITTALANPYGLYDHLK
MIVPLKDGASPPISLFFIAALLRIRKLKEQRKSSQGMSESDEKLFEASLV
RIVGFIVASIIVLDPNTERNFSLMTSVSRFVSTDAFWWDFNNDDEPVESK
AHVVRACLHLRELLHNRGTYPGTPFFTLLSSLCECFLRCSSNEHEGIKTL
SELHGIDVSWDSWRELRSGELAPYTRCCSDLETNAVQRFFLHFCTAKGIS
GHTVEDQLRSLKRSLPKKDYVVLFSATLRSTTFPHVRDMLLPELLAELHL
RQRQRPGVEGDIILSRNSFDYFVQRKWAMGPRLNSGDYVLLYEHIGSVWH
*
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