Gcaud7809.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7809.t1
Unique NameGcaud7809.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length801
Homology
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BLAST of Gcaud7809.t1 vs. uniprot
Match: A0A2V3INM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM1_9FLOR)

HSP 1 Score: 103 bits (257), Expect = 6.550e-19
Identity = 83/249 (33.33%), Postives = 115/249 (46.18%), Query Frame = 0 
Query:  521 LSMVFFDQELKSLISDNFRLSNAPRDKSLLQA-------------------------------FRISD-----HISCILHHQHPNSTALHHLIGSVQQSPFLANLY-------------IERQHVDLSNSSTSPQWISDLRTHFGKVRIPVSANFQRRTYLNMCEHDERRAPTALWHFDNSNSLQHEGKLTESS--KAQNHVAYATATNIRRNTSYYSNQGVHSSPGDTTVALNFGFQTRTNYPFRKTY 718
            LS  FFDQEL  L  + FRL++APR++S+++A                               F +S+     H S    H+   S     L  S   + F ++LY             +     D++ S    +  + ++      R     NFQRRTYLNM E DERR  TA W  D +        L + S  +  +HVAYA A+N R + SY++ + VH +P DTT ALNFGFQ RTNYPFR T+
Sbjct:  707 LSAHFFDQELHELFDEKFRLTHAPREQSMIKATALCEQFPSPKSERQSPTSLIKGLVNRTGPLFSLSEPDAHLHYSTTCTHRSDKSQHASSLSNSEPHTIFPSSLYNSEISELSPFIRDLPPGRRDVTESPLPSESKNGIQELPAVGRSSSVNNFQRRTYLNMSELDERRYATAAWQPDITCYTPLSNGLIQPSGQRQSSHVAYAFASNKRAH-SYHTGRAVHCAPTDTTTALNFGFQRRTNYPFRTTH 954
The following BLAST results are available for this feature:
BLAST of Gcaud7809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INM1_9FLOR6.550e-1933.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:14908..17310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7809.t1Gcaud7809.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 14908..17310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7809.t1 ID=Gcaud7809.t1|Name=Gcaud7809.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=801bp
MASPRSRPPGPLERDGVQRTPPADQRAADQQAHTLHHSDDELFSARVSAL
IAERRRLLRQGLIHRLQHLKAAILSSELNEHHESAEQSLLRSEQDQTTSH
TQRTSSSVFLRSPVGVVSRLHSKPYVVGRQDPPKQSTAFSPYASRPTHDE
SNPTRQSHPAEPTPLSQLGWETNASGIRQAENTEQDLPAGGSGDHERLQM
TQRRHSDPQLMHHAATLQRGEGGEIATTLLQPSFPETRPLPKDVQSLTPF
GTKSFTIQSLPPFNSYGAHSLTENLDASEDQLPVIPQADSVDNYNVGHRR
RCHSMDTAEVSASQVRLNVGFSTDNEQINASQHSVTSLPVRDKTLNNRYS
TNQYEALDLTGQAPHRTTQNSPGVASRNGTDGRFSPVSPILSFEVQLYSS
FAADITAPKKLGGWRFRYGLAKGQAGAEAHTGYRDNGSVSRTAGQVLYGD
RQSYSSSVRINDIFSSLSGRIPSLSSSESVATVNPPASRSGQKARDPVFV
DMQSSNLFIPPAGGTLPLSLLSMVFFDQELKSLISDNFRLSNAPRDKSLL
QAFRISDHISCILHHQHPNSTALHHLIGSVQQSPFLANLYIERQHVDLSN
SSTSPQWISDLRTHFGKVRIPVSANFQRRTYLNMCEHDERRAPTALWHFD
NSNSLQHEGKLTESSKAQNHVAYATATNIRRNTSYYSNQGVHSSPGDTTV
ALNFGFQTRTNYPFRKTYLYTHRRGEVAREALRPPLAEESSVDALESAES
PAHVLGPASQQSFLLGAHYGSSAPREAVRADGETQVYSISEEGKLELRKH
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