Gcaud8097.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8097.t1
Unique NameGcaud8097.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length574
Homology
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A2V3IH13_9FLOR (RNA-splicing ligase RtcB homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH13_9FLOR)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 454/504 (90.08%), Postives = 479/504 (95.04%), Query Frame = 0
Query:    5 VQSRQSRKRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            V S++  KR+++EELSFL +  PC+Y+IDVGFVPNMRAPGTFFVNE LAPLVK+ELQRF ENES GGFIPAVKQIANVSSLPGIV  SIAMPDVHSGYGFAIGNVAAFDMND +AVVSPGGVGFDINCGVRLIRTNLME DV+ +KE LAQ LFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVV+EIFD +AA KMGIGK+GQVVIMIHSGSRGLGHQVATDALQ MEKAM RD IKVNDRQLACARISS+EGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFE+TP ELDMH+IYDVSHNIAKVETH++DG  KQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTE+GM++TFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTC +AGISKKCV+LR
Sbjct:    5 VSSKRRLKRSYEEELSFLRRTAPCQYQIDVGFVPNMRAPGTFFVNEKLAPLVKSELQRFCENESAGGFIPAVKQIANVSSLPGIVQSSIAMPDVHSGYGFAIGNVAAFDMNDDEAVVSPGGVGFDINCGVRLIRTNLMEEDVDSLKEVLAQTLFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVDEIFDDIAAHKMGIGKVGQVVIMIHSGSRGLGHQVATDALQHMEKAMARDRIKVNDRQLACARISSREGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFEKTPAELDMHVIYDVSHNIAKVETHMIDGETKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTERGMQKTFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCDEAGISKKCVRLR 508          
BLAST of Gcaud8097.t1 vs. uniprot
Match: R7QGD8_CHOCR (RNA-splicing ligase RtcB homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGD8_CHOCR)

HSP 1 Score: 860 bits (2221), Expect = 3.060e-305
Identity = 422/499 (84.57%), Postives = 463/499 (92.79%), Query Frame = 0
Query:   11 RKRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESV-GGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            R+RT++EELS+L  + PCRY+I +GFVPNM APGTF+VNE+LAPLVK EL+R ++N S+ GGF+PAVKQIANVSSLPGIV RSIAMPDVHSGYGFAIGNVAAFDM+D  AVVSPGGVGFDINCGVRL+RTNLME DV+PVK+ LAQ LFDHIPVGVGSKGIIPTT++SLE ALELGMDWSLREGYAWPEDKEHCEE GRMLQADP KVS+RAKKRGL+QLGTLGAGNHYAEIQ+V+EIFD  AA  MG+  +GQVV+MIHSGSRGLGHQVATDALQ MEKAM RDGI+VNDRQLACARI+S+EGQDYL  MAAAANFAWVNRSSMTFLARQAFAKVF ++P ELDMH+IYDVSHNIAKVETH VDG +K+LLVHRKGATRAFPPHHPL+PCDYQ TGQPVL+GGTMGTCSYVLLGTE GMKETFGSTCHGAGRAQSRSACRR+LNYEEVLNNL+ KGIAIRVASPKLVTEEAPESYKDVSAVVDTC QAGIS+KC+KLR
Sbjct:  401 RRRTYEEELSYLRLVAPCRYDISIGFVPNMLAPGTFYVNEVLAPLVKAELERAAKNPSLSGGFLPAVKQIANVSSLPGIVARSIAMPDVHSGYGFAIGNVAAFDMDDPQAVVSPGGVGFDINCGVRLLRTNLMEQDVQPVKDVLAQTLFDHIPVGVGSKGIIPTTIQSLEAALELGMDWSLREGYAWPEDKEHCEENGRMLQADPCKVSARAKKRGLSQLGTLGAGNHYAEIQIVDEIFDETAAAAMGVTTVGQVVVMIHSGSRGLGHQVATDALQHMEKAMARDGIEVNDRQLACARIASKEGQDYLAGMAAAANFAWVNRSSMTFLARQAFAKVFGKSPAELDMHVIYDVSHNIAKVETHNVDGKVKKLLVHRKGATRAFPPHHPLVPCDYQMTGQPVLIGGTMGTCSYVLLGTEHGMKETFGSTCHGAGRAQSRSACRRQLNYEEVLNNLEGKGIAIRVASPKLVTEEAPESYKDVSAVVDTCDQAGISRKCLKLR 899          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A5B8MFK2_9CHLO (RNA-splicing ligase RtcB homolog n=2 Tax=Chloropicon TaxID=2302914 RepID=A0A5B8MFK2_9CHLO)

HSP 1 Score: 791 bits (2042), Expect = 3.150e-284
Identity = 384/500 (76.80%), Postives = 434/500 (86.80%), Query Frame = 0
Query:    9 QSRKRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            + + RTF EE  ++ K T  +Y I+ GFVPNM+ PG F+VNE L  L+  ELQ + E  +VGGF+PAVKQ+ANV++LPG+V +SIA+PDVHSGYGFAIGNVAA DMND  +VVSPGGVGFDINCGVRLIRTNL E  V P++E LAQALFDHIPVGVGS+GIIPTT K LEEALE+GMDWS+REGY+W EDKEHCEEYGRML ADP+KVS RAKKRGL Q+GTLGAGNHY EIQVVEEIFD  AA +MGI K+GQV IMIHSGSRGLGHQVATD+L  MEKAM RDGI+ NDRQLACARI S+EGQ+YL AMA AAN+AWVNR SMTFLARQAFAK F++ P ELDMHL+YDVSHNIAK+E H+VDG MKQLLVHRKG+TRAFPPHHPLIP DYQFTGQPVL+GGTMGTCSYVL GT++GM+ETFGSTCHGAGRA+SR+  R KL Y+EVLNNLK KGI+IRVASPKLV EEAPESYKDV+ VVDTCH AGISKKCV+LR
Sbjct:    2 KEKARTFKEETDYISKETDEKYRINEGFVPNMKVPGYFYVNESLRSLLDEELQAYCERGNVGGFLPAVKQLANVAALPGVVGKSIALPDVHSGYGFAIGNVAAMDMNDPSSVVSPGGVGFDINCGVRLIRTNLTEDQVRPLQEDLAQALFDHIPVGVGSQGIIPTTAKDLEEALEMGMDWSIREGYSWVEDKEHCEEYGRMLNADPSKVSKRAKKRGLPQMGTLGAGNHYCEIQVVEEIFDVPAASRMGISKVGQVCIMIHSGSRGLGHQVATDSLTAMEKAMSRDGIETNDRQLACARIDSEEGQNYLAAMACAANYAWVNRCSMTFLARQAFAKTFKKNPDELDMHLVYDVSHNIAKIEEHLVDGEMKQLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTKKGMEETFGSTCHGAGRARSRANARNKLEYQEVLNNLKAKGISIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKCVRLR 501          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A7S0WTW0_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WTW0_9CHLO)

HSP 1 Score: 788 bits (2034), Expect = 4.820e-283
Identity = 387/496 (78.02%), Postives = 434/496 (87.50%), Query Frame = 0
Query:   13 RTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            RT+D+E +F+ K+ P +Y +  GFVP MR PG F+VN+ L  L+ +ELQ+     + GGF+PAVKQ+ANV++LPGIV RSIA+PDVHSGYGFAIGNVAAFDM+D  AVVSPGGVGFDINCGVRL+RTNL E+DVEPVK+ LAQALFDHIPVGVGS+GIIPT+ K LE ALELGMDWSLREGYAW EDKEHCEEYGRML ADP+KVSSRAKKRGL Q+GTLGAGNHYAEIQVV+EI+D  AA KMGI ++GQV +MIHSGSRGLGHQVATDAL  ME+AM RD I  NDRQLACARISS+EGQDYL AMA AAN+AWVNRSSMTFL RQAFAKVF  TP +LDMH++YDVSHNIAKVE H+VDG   +LLVHRKG+TRAFPPHHPLIP DYQFTGQPVL+GGTMGTCSYVL GTEQG  ETFGSTCHGAGRA+SR++ R KL+Y+EVL+ LK KGIAIRVASPKLV EEAPESYKDVS VVDTCHQAGISKKCVKLR
Sbjct:    4 RTYDQECAFIEKVGPVQYCVKPGFVPGMRVPGAFYVNDHLKGLLFDELQQSVARGAQGGFLPAVKQLANVAALPGIVSRSIALPDVHSGYGFAIGNVAAFDMDDPQAVVSPGGVGFDINCGVRLVRTNLTEADVEPVKDALAQALFDHIPVGVGSQGIIPTSAKDLEAALELGMDWSLREGYAWAEDKEHCEEYGRMLTADPSKVSSRAKKRGLPQMGTLGAGNHYAEIQVVDEIYDHAAASKMGIDQVGQVCVMIHSGSRGLGHQVATDALVEMERAMARDKIATNDRQLACARISSREGQDYLAAMACAANYAWVNRSSMTFLTRQAFAKVFNSTPDDLDMHVVYDVSHNIAKVEEHIVDGKRMRLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEQGFTETFGSTCHGAGRARSRNSSRNKLDYQEVLDALKAKGIAIRVASPKLVMEEAPESYKDVSEVVDTCHQAGISKKCVKLR 499          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A7S1GE03_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE03_9STRA)

HSP 1 Score: 783 bits (2022), Expect = 4.030e-281
Identity = 379/496 (76.41%), Postives = 438/496 (88.31%), Query Frame = 0
Query:   13 RTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            RT++EE +++ + T  R+ +D+GFVPNMR PG F+VN+ L  L+ +EL++FS    VGGF+PA+KQ+ANV++LPGIV RSIA+PDVHSGYGFAIGNVAAFDMND  +VVSPGGVGFDINCGVRL+RTNL E+D+ PVKE+L Q+LFDHIPVGVGSKGIIPTT K LE  LE+GMDWSLREGYAW EDKEHCEEYGRML ADP+KVS RAKKRGL QLGTLGAGNHYAEIQ+V+EI+D+ AA +MGI ++GQV +MIHSGSRGLGHQVATDAL  MEKAM RD I+VNDRQLACARI+S EGQ+YLK+MAAAAN+AWVNRSSMTFL RQAFAK+F  TP +LDMH++YDVSHNIAKVE H+VDG +++LLVHRKG+TRAFPPHHPLIP DYQFTGQPVL+GGTMGTCSYVL GTE+GM ETFGSTCHGAGRA SR+  RR L+Y EVL  L+EKGI+IRVASPKLV EEAPESYKDV+AVVDTCH AGISKK +KLR
Sbjct:   10 RTYEEECAYVKRETTERFGVDIGFVPNMRVPGVFYVNDRLESLMFDELKQFSTASGVGGFLPAMKQLANVAALPGIVKRSIALPDVHSGYGFAIGNVAAFDMNDPTSVVSPGGVGFDINCGVRLVRTNLTEADLLPVKEKLTQSLFDHIPVGVGSKGIIPTTAKDLEAGLEMGMDWSLREGYAWAEDKEHCEEYGRMLAADPSKVSKRAKKRGLPQLGTLGAGNHYAEIQIVDEIYDTHAAGRMGIEQVGQVCVMIHSGSRGLGHQVATDALNEMEKAMVRDRIEVNDRQLACARITSTEGQNYLKSMAAAANYAWVNRSSMTFLTRQAFAKMFNSTPDDLDMHVVYDVSHNIAKVEEHIVDGRLRKLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEKGMAETFGSTCHGAGRAHSRAKSRRTLDYHEVLRKLEEKGISIRVASPKLVMEEAPESYKDVTAVVDTCHAAGISKKVIKLR 505          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A7S0RKU3_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RKU3_9CHLO)

HSP 1 Score: 779 bits (2011), Expect = 1.970e-279
Identity = 374/500 (74.80%), Postives = 435/500 (87.00%), Query Frame = 0
Query:    9 QSRKRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            ++++RT+ +E+ ++ +++PC + + +GFVP+MR PG+F+VN+ L  L+  EL+++      GGF+PAVKQ+ANV++LPGIV +SIA+PDVHSGYGFAIGNVAAFDM++ +AVVSPGGVGFDINCGVRL+RTNL   DVE VKE LAQALFDHIPVGVGS+GIIPTT + LE ALE+GMDWSLREGYAW EDKEHCEEYGRML A+P KVSSRAKKRGL QLGTLGAGNHYAEIQVV+EIFD  AA KMGI ++GQV IMIHSGSRG GHQVATDAL  ME+AM   GI  NDRQLACARI+SQEGQDYL+AMA AAN+AWVNRSSMTFL RQAFAK F  TP +LDMH++YDVSHNIAK+E H+VDG  K+LLVHRKG+TRAFPPHHPLIP DYQFTGQPVL+GGTMGTCSYVL GTE+GM+ETFGSTCHGAGRA+SR+  R KL+Y +VL  LK+KGIAIRVASPKLV EEAPESYKDV+AVVDTCH AGISKK +KLR
Sbjct:    7 RTKRRTYVQEMEYIERVSPCEFRVKIGFVPHMRVPGSFYVNQALEKLMLEELEQYCHRSDTGGFLPAVKQLANVAALPGIVSKSIALPDVHSGYGFAIGNVAAFDMSNPEAVVSPGGVGFDINCGVRLVRTNLTYKDVEDVKEVLAQALFDHIPVGVGSQGIIPTTAEGLEAALEMGMDWSLREGYAWAEDKEHCEEYGRMLTANPNKVSSRAKKRGLPQLGTLGAGNHYAEIQVVDEIFDKSAANKMGIDQIGQVCIMIHSGSRGFGHQVATDALSAMERAMAMQGIHTNDRQLACARINSQEGQDYLEAMACAANYAWVNRSSMTFLTRQAFAKQFNCTPDDLDMHVVYDVSHNIAKIEEHMVDGVQKRLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEKGMEETFGSTCHGAGRARSRNNARNKLDYTQVLAGLKQKGIAIRVASPKLVMEEAPESYKDVTAVVDTCHMAGISKKTIKLR 506          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A2V0NPS7_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPS7_9CHLO)

HSP 1 Score: 776 bits (2003), Expect = 2.500e-278
Identity = 384/496 (77.42%), Postives = 425/496 (85.69%), Query Frame = 0
Query:   13 RTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            RT+++E +F+ K+ P +Y I  GFVPNMR PGTF+VN+ LAPL+  EL         GGF+PAVKQIANV++LPGIV  SIAMPDVHSGYGFAIGNVAAFDM D  AVVSPGGVGFDINCGVRLIRTNL E+DVEPVKE L Q+LFDHIPVGVGS+GIIPTT   LE ALE+GMDWSLREGYAW EDKEHCEEYGRMLQAD +KVS RAKKRGL Q+GTLGAGNHYAEIQVV+E+FD   ARKMGI  +GQV IMIHSGSRGLGHQVATDAL  ME+AM RD I VNDRQLACARI S EGQ+YLKAMA AAN+AWVNRSSMTFLARQAFAK F  TP +LDMH++YDVSHNIAKVE H+V+G   +LLVHRKGATRAFPPHHPLIP DYQ TGQPVL+GGTMGTCSYVL GTE G +ETFGSTCHGAGR++SR++ R  L+Y+EVL+ LK KGIAIRVASPKLV EEAPESYKDV+AVVDTCH AGISKK VKLR
Sbjct:    4 RTYEQERAFIEKVGPVKYRIKEGFVPNMRVPGTFYVNDALAPLLMEELAAAVARNEHGGFLPAVKQIANVAALPGIVRESIAMPDVHSGYGFAIGNVAAFDMADPQAVVSPGGVGFDINCGVRLIRTNLTEADVEPVKEALTQSLFDHIPVGVGSQGIIPTTAADLEAALEMGMDWSLREGYAWAEDKEHCEEYGRMLQADTSKVSPRAKKRGLPQMGTLGAGNHYAEIQVVDEVFDEGVARKMGIETVGQVCIMIHSGSRGLGHQVATDALVEMERAMARDRIAVNDRQLACARIGSAEGQNYLKAMACAANYAWVNRSSMTFLARQAFAKAFSSTPDDLDMHVVYDVSHNIAKVEDHMVNGREARLLVHRKGATRAFPPHHPLIPVDYQITGQPVLIGGTMGTCSYVLTGTETGFEETFGSTCHGAGRSRSRNSARNNLDYQEVLDALKAKGIAIRVASPKLVMEEAPESYKDVTAVVDTCHAAGISKKAVKLR 499          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A2P6TPW4_CHLSO (RNA-splicing ligase RtcB homolog n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TPW4_CHLSO)

HSP 1 Score: 781 bits (2018), Expect = 2.810e-278
Identity = 379/489 (77.51%), Postives = 431/489 (88.14%), Query Frame = 0
Query:   13 RTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGIS 501
            RT+DEE++F+ +++P  Y++  GFVP M  PG F+VN+ L  L+  ELQ + +    GGF+PAVKQIANV++LPGIV +SIA+PDVHSGYGFAIGNVAAFDM D  AVVSPGGVGFDINCGVRLIRTNL E DVEPV+EQLAQALFDHIPVGVGS+GIIPTT K LEEALE+GMDWSLREGY+W EDKEHCEEYGRML ADP+KVS+RAKKRGL Q+GTLGAGNHYAEIQV++E+FD +AARKMGI ++GQV IMIHSGSRGLGHQVATDAL  MEKAM RDGI  NDRQLACARI+SQEGQDYL AMA AAN+AWVNRSSMTFL RQAFAK+F +TP +LDMH++YDVSHNIAKVE H+VDG +K LLVHRKG+TRAFPPHHPLIP DYQ TGQPVL+GGTMGTCSYVL GTE+GM+ETFGSTCHGAGRA+SR+  R KL+Y++VL+ LK KGI+IRVASPKLV EEAPESYKDVS VVDTCH AGIS
Sbjct:    8 RTYDEEMAFIDQLSPYHYKVRTGFVPGMHVPGVFYVNDRLRGLLFEELQAYCQRGEHGGFLPAVKQIANVAALPGIVRKSIALPDVHSGYGFAIGNVAAFDMADPQAVVSPGGVGFDINCGVRLIRTNLTEKDVEPVREQLAQALFDHIPVGVGSQGIIPTTAKDLEEALEMGMDWSLREGYSWAEDKEHCEEYGRMLNADPSKVSARAKKRGLPQMGTLGAGNHYAEIQVIDEVFDRVAARKMGIDQVGQVCIMIHSGSRGLGHQVATDALVAMEKAMARDGIVTNDRQLACARINSQEGQDYLTAMACAANYAWVNRSSMTFLCRQAFAKMFGQTPDDLDMHVVYDVSHNIAKVEEHMVDGQLKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEKGMEETFGSTCHGAGRARSRNNSRNKLDYQQVLDALKAKGISIRVASPKLVMEEAPESYKDVSEVVDTCHNAGIS 496          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A7S3M965_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M965_9STRA)

HSP 1 Score: 776 bits (2004), Expect = 3.430e-278
Identity = 380/496 (76.61%), Postives = 429/496 (86.49%), Query Frame = 0
Query:   13 RTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            RTFD+E S++ KI+P +YEI+ GFV  M   GTF+VN  L  LV +EL+    + + GGF+PAVKQIANV++LPGIV++SI +PD+HSGYGFAIGNVAAFDM++ ++VVSPGGVGFDINCGVRL+RTNL E+DV PV+EQLAQ+LFDHIPVGVGSKG+IPTTM  L EALE+GMDWS+REGYAW EDKEHCEEYGRMLQADPTKVS+RAKKRGL QLGTLGAGNHY EIQVV+EIFD  AA +MGI K+GQV IMIHSGSRGLGHQVATDAL  ME AM RD +  NDRQLACARI+S EGQDYL  MAAAAN+AWVNRSSMTFL RQAFAK F R P +LDMH++YDVSHNIAKVE H+VDG MK LLVHRKG+TRAFPPHHPLIP DYQF GQPVL+GGTMGTCSYVL GT+ GM ETFGSTCHGAGRAQSR+A RR L Y+EVL+ L  +GIAIRVASPKLV EEAPESYKDV+ VVDTCH AGISKKC+KLR
Sbjct:   22 RTFDQEKSYIKKISPWKYEINKGFVNGMNCKGTFYVNSALEGLVFDELRCSCGSGAFGGFLPAVKQIANVAALPGIVHKSIGLPDLHSGYGFAIGNVAAFDMDNPESVVSPGGVGFDINCGVRLLRTNLTEADVGPVREQLAQSLFDHIPVGVGSKGVIPTTMADLNEALEMGMDWSVREGYAWAEDKEHCEEYGRMLQADPTKVSARAKKRGLPQLGTLGAGNHYCEIQVVDEIFDQQAAARMGIDKIGQVCIMIHSGSRGLGHQVATDALTAMEAAMTRDKLVTNDRQLACARINSPEGQDYLAGMAAAANYAWVNRSSMTFLVRQAFAKQFNREPDDLDMHVVYDVSHNIAKVEQHMVDGKMKTLLVHRKGSTRAFPPHHPLIPVDYQFIGQPVLIGGTMGTCSYVLTGTQTGMDETFGSTCHGAGRAQSRNASRRTLEYQEVLDKLASQGIAIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKCIKLR 517          
BLAST of Gcaud8097.t1 vs. uniprot
Match: A0A087SMJ6_AUXPR (RNA-splicing ligase RtcB homolog n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SMJ6_AUXPR)

HSP 1 Score: 775 bits (2001), Expect = 6.780e-278
Identity = 379/497 (76.26%), Postives = 432/497 (86.92%), Query Frame = 0
Query:   12 KRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNELLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHSGYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVKEQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDKEHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDSMAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVNDRQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTPLELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPCDYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACRRKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGISKKCVKLR 508
            +RT++EE +F+ K++P  + I+ GFVPNMR PG F+VN  L  ++ +EL+ + +    GGF+PAVKQIANV++LPGIV  SIAMPDVHSGYGF+IGNVAAFDM+D +AVVSPGGVGFDINCGVRL+RTNL E DV  VKEQLAQALFDHIPVGVGS+GIIPTT + L  ALELGMDWSLREGYAW EDKEHCEE GRML ADPT+VS RAKKRGL Q+GTLGAGNHYAEIQVV+ +FD  AARKMGI  +GQV +MIHSGSRGLGHQVATDAL  ME+AM RDGI VNDRQLACARI+SQEGQDYL AMA AANFAWVNRSSMTFL RQAFAK+F+ TP +LDMH++YDVSHNIAKVE H+VDG MK LLVHRKGATRAFPPHHPLIP DYQ TGQPVL+GGTMGT SYVL GT++GM ET+GSTCHGAGRA+SR+A R KL+Y++VL++LK KGIAIRVASPKLV EEAP+SYKDV  V++TCHQAGISKK VKLR
Sbjct:   11 RRTYEEESAFITKLSPYHHRIETGFVPNMRVPGIFYVNGALRSILDDELRAYCDRGPAGGFLPAVKQIANVAALPGIVRHSIAMPDVHSGYGFSIGNVAAFDMSDPEAVVSPGGVGFDINCGVRLLRTNLREEDVLGVKEQLAQALFDHIPVGVGSQGIIPTTSRDLAGALELGMDWSLREGYAWAEDKEHCEEAGRMLGADPTRVSPRAKKRGLPQMGTLGAGNHYAEIQVVDAVFDRAAARKMGIDAVGQVCVMIHSGSRGLGHQVATDALVAMERAMARDGIPVNDRQLACARIASQEGQDYLAAMACAANFAWVNRSSMTFLCRQAFAKMFDATPDDLDMHVVYDVSHNIAKVEEHMVDGRMKSLLVHRKGATRAFPPHHPLIPVDYQLTGQPVLIGGTMGTASYVLTGTDKGMAETWGSTCHGAGRARSRNAARNKLDYQQVLDSLKTKGIAIRVASPKLVMEEAPDSYKDVDDVIETCHQAGISKKTVKLR 507          
The following BLAST results are available for this feature:
BLAST of Gcaud8097.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH13_9FLOR0.000e+090.08RNA-splicing ligase RtcB homolog n=1 Tax=Gracilari... [more]
R7QGD8_CHOCR3.060e-30584.57RNA-splicing ligase RtcB homolog n=1 Tax=Chondrus ... [more]
A0A5B8MFK2_9CHLO3.150e-28476.80RNA-splicing ligase RtcB homolog n=2 Tax=Chloropic... [more]
A0A7S0WTW0_9CHLO4.820e-28378.02RNA-splicing ligase RtcB homolog n=1 Tax=Chlamydom... [more]
A0A7S1GE03_9STRA4.030e-28176.41RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoeci... [more]
A0A7S0RKU3_9CHLO1.970e-27974.80RNA-splicing ligase RtcB homolog n=1 Tax=Pyramimon... [more]
A0A2V0NPS7_9CHLO2.500e-27877.42RNA-splicing ligase RtcB homolog n=1 Tax=Raphidoce... [more]
A0A2P6TPW4_CHLSO2.810e-27877.51RNA-splicing ligase RtcB homolog n=1 Tax=Chlorella... [more]
A0A7S3M965_9STRA3.430e-27876.61RNA-splicing ligase RtcB homolog n=1 Tax=Spumella ... [more]
A0A087SMJ6_AUXPR6.780e-27876.26RNA-splicing ligase RtcB homolog n=2 Tax=Auxenochl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036025tRNA-splicing ligase RtcB-like superfamilyGENE3D3.90.1860.10coord: 20..510
e-value: 8.0E-194
score: 647.0
IPR036025tRNA-splicing ligase RtcB-like superfamilySUPERFAMILY103365Hypothetical protein PH1602coord: 22..508
IPR001233RNA-splicing ligase, RtcBPFAMPF01139RtcBcoord: 78..508
e-value: 2.8E-148
score: 494.5
IPR001233RNA-splicing ligase, RtcBPANTHERPTHR11118UNCHARACTERIZEDcoord: 21..508
IPR027513RNA-splicing ligase RtcB homologue, eukaryoticHAMAPMF_03144RtcB_eukcoord: 11..515
score: 61.023941

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_211_length_36859_cov_4.689676contigNODE_211_length_36859_cov_4.689676:30424..32436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8097.t1Gcaud8097.t1Gracilaria caudata M_176_S67 malemRNANODE_211_length_36859_cov_4.689676 30424..32436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8097.t1 ID=Gcaud8097.t1|Name=Gcaud8097.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=574bp
MPRIVQSRQSRKRTFDEELSFLHKITPCRYEIDVGFVPNMRAPGTFFVNE
LLAPLVKNELQRFSENESVGGFIPAVKQIANVSSLPGIVYRSIAMPDVHS
GYGFAIGNVAAFDMNDKDAVVSPGGVGFDINCGVRLIRTNLMESDVEPVK
EQLAQALFDHIPVGVGSKGIIPTTMKSLEEALELGMDWSLREGYAWPEDK
EHCEEYGRMLQADPTKVSSRAKKRGLTQLGTLGAGNHYAEIQVVEEIFDS
MAARKMGIGKLGQVVIMIHSGSRGLGHQVATDALQLMEKAMERDGIKVND
RQLACARISSQEGQDYLKAMAAAANFAWVNRSSMTFLARQAFAKVFERTP
LELDMHLIYDVSHNIAKVETHVVDGNMKQLLVHRKGATRAFPPHHPLIPC
DYQFTGQPVLVGGTMGTCSYVLLGTEQGMKETFGSTCHGAGRAQSRSACR
RKLNYEEVLNNLKEKGIAIRVASPKLVTEEAPESYKDVSAVVDTCHQAGI
SKKCVKLREPEKAVADAMDICDVLRTTLSSVVEFRLWVSGGNSFYEPGDN
LAFGGAWLIDGDVFSVLTSSVLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036025RtcB-like_sf
IPR001233RtcB
IPR027513RtcB_euk