Gcaud8094.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8094.t1
Unique Name	Gcaud8094.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	265

Homology

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BLAST of Gcaud8094.t1 vs. uniprot
Match: R7Q5Q8_CHOCR (30S ribosomal protein S5, chloroplastic n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7Q5Q8_CHOCR)

HSP 1 Score: 450 bits (1157), Expect = 1.290e-158
Identity = 244/266 (91.73%), Postives = 256/266 (96.24%), Query Frame = 0

Query:    1 MVESGRGGHPGGFGRGGERGXXXXXXXXXXXXXX--QEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLSGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTAPIPTIGA 264
            M ++GRGGHPGGFGRGG+RGXXXXXXXXXXXXXX  QEEEKEWVPMTKLGRLVKEG IRSLEEIFLFS+PVKE+QIIEALLSGL DEVLKIM VQKQTRAGQRTRFKAFVVVGDS GHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTG+VAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAI++TYAYLSP+FWRETRFAKNPF  YS+LLAK+A +PTIGA
Sbjct:    1 MADTGRGGHPGGFGRGGDRGXXXXXXXXXXXXXXXRQEEEKEWVPMTKLGRLVKEGKIRSLEEIFLFSVPVKEHQIIEALLSGLNDEVLKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGIVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAISETYAYLSPDFWRETRFAKNPFHTYSDLLAKSAVVPTIGA 266

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A1X6NVL2_PORUM (30S ribosomal protein S5, chloroplastic n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVL2_PORUM)

HSP 1 Score: 355 bits (911), Expect = 7.340e-121
Identity = 176/230 (76.52%), Postives = 201/230 (87.39%), Query Frame = 0

Query:   36 EEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLSGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTA-PIPTIGA 264
            EEEKEW+PMTKLGRLVKEG I+SLE +FLFSIPVKE+QII+  L GL DEVL IM VQKQTRAGQRTRFKAFVVVGD+ GHVGLGVKSAKEVATAIRGAI+ +KL +VPVRRGYWG  I  PHTVPCKVTGKCGSV +RLVPAPRGTG+VAA+VPKKLLQ AGLED F+SS+GHTRTLGNFAKATF+AI+ TY +L+P+FW+ET+F  +PF+ YS LL+K A P P + A
Sbjct:   57 EEEKEWIPMTKLGRLVKEGKIKSLEHVFLFSIPVKEFQIIDNFLPGLSDEVLNIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKSAKEVATAIRGAIIAAKLAVVPVRRGYWGNRIGLPHTVPCKVTGKCGSVRMRLVPAPRGTGIVAAKVPKKLLQAAGLEDVFTSSSGHTRTLGNFAKATFHAISATYGFLTPDFWKETKFLASPFEEYSGLLSKAAAPTPVVPA 286

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A5J4Z471_PORPP (30S ribosomal protein S5, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z471_PORPP)

HSP 1 Score: 345 bits (884), Expect = 2.050e-116
Identity = 171/220 (77.73%), Postives = 193/220 (87.73%), Query Frame = 0

Query:   36 EEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLS-GLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLA 254
            +E KEWVP TKLGRLVK+G I SLE IFLFSIP+KE QI++  L   LQDEVLKIM VQKQTRAGQRTRFKAFVVVGDS GHVGLGVKSAKEVATAIRGAI+ +KL IVPVRRG+WG  +  PHTVPCKVTGKCGSVS+RL+PAPRGTG+VAARVPKKLLQMAG EDCF+SS GH RTLGNFA ATF+AIA TY +L+P+ W+ET+F++NPFQ+YSE LA
Sbjct:   85 DEAKEWVPCTKLGRLVKDGKIASLEHIFLFSIPIKESQIVDHFLGKSLQDEVLKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKSAKEVATAIRGAIIAAKLEIVPVRRGFWGNKLGNPHTVPCKVTGKCGSVSLRLIPAPRGTGIVAARVPKKLLQMAGYEDCFTSSDGHARTLGNFAFATFHAIAATYGFLTPDLWKETKFSQNPFQLYSEYLA 304

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A6J5WHV5_PRUAR (S5 DRBM domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A6J5WHV5_PRUAR)

HSP 1 Score: 338 bits (868), Expect = 1.610e-114
Identity = 174/262 (66.41%), Postives = 216/262 (82.44%), Query Frame = 0

Query:    2 VESGRGGHPGGFG-RGGERGXXXXXXXXXXXXXXQEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLSG--LQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAK-TAPI 259
             E GRGG   GFG RGG+RG              +EEE++WVP+TKLGRLVKEG I+SLE+I+L S+P+KE+QII+AL++   L+DEV+KIM VQKQTRAGQRTRFKAFVVVGDS GHVGLGVK +KEVATAIRGAI+ +KL+++PVRRGYWG  I +PHTVPCKVTGKCGSV+VR+VPAPRG G+VAARVPKK+LQ AG++D F+SS G T+TLGNF KATF  + KTY +L+PEFW+ETRF+K+PFQ +++LL + T P+
Sbjct:    6 AERGRGGFGRGFGGRGGDRGRGGGHRRPGR----REEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPIKEHQIIDALVASGSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEFTDLLGRPTKPL 263

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A388K2A9_CHABU (S5 DRBM domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K2A9_CHABU)

HSP 1 Score: 337 bits (865), Expect = 5.290e-114
Identity = 182/261 (69.73%), Postives = 219/261 (83.91%), Query Frame = 0

Query:    5 GRGGHPGGFGRG--GERGXXXXXXXXXXXXXXQEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALL-SGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTAPIPTI 262
            GRGG   GFGRG  G+RG  XXXXXXXX    +EE + WVP+TKLGRLVK+G I+SLE+I+LFS+P+KE+QI+E  L + L+DEV+KIM VQKQTRAGQRTRFKAFVVVGDS GHVGLGVK +KEVATAIRGAI+ +KL+++PVRRGYWG  I +PHTVP KVTGKCGSVSVRLVPAPRG G+VAARVPKK+LQ AG+ED F+SSTG T+TLGNF KATF  + KTY +L+PE WRETRF ++PFQ +++ LAK  PI ++
Sbjct:    8 GRGGFGRGFGRGDRGDRGRGXXXXXXXXRGPRREEAEAWVPVTKLGRLVKDGKIKSLEQIYLFSLPIKEHQIVEYFLGAALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPAKVTGKCGSVSVRLVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSTGCTKTLGNFVKATFACLLKTYGFLTPELWRETRFTRSPFQEFTDFLAK--PIKSV 266

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A022R9Q2_ERYGU (S5 DRBM domain-containing protein n=8 Tax=Lamiales TaxID=4143 RepID=A0A022R9Q2_ERYGU)

HSP 1 Score: 337 bits (864), Expect = 8.040e-114
Identity = 180/265 (67.92%), Postives = 219/265 (82.64%), Query Frame = 0

Query:    1 MVESGRGGHPGGFGRG---------GERGXXXXXXXXXXXXXXQEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLS-GLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAK 255
            M E G GG  GGFGRG         G  GXXXXXXXXXX    + EE++WVP+TKLGRLV++G I+S+E+I+L S+P+KEYQII+ L+   L+DEV+KIM VQKQTRAGQRTRFKAFVVVGD  GHVGLGVK +KEVATAIRGAI+ +KL+++PVRRGYWG  I +PHTVPCKVTGKCGSV+VR+VPAPRG G+VAARVPKK+LQ AG+ED F+SS G T+TLGNF KATF  + KTY +L+P+FW+ETRF+K+PFQ Y++LLAK
Sbjct:    1 MSERGGGGERGGFGRGFGGXDRGGRGRGGXXXXXXXXXXRPRRETEEEKWVPVTKLGRLVRDGKIKSIEQIYLHSLPIKEYQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWKETRFSKSPFQEYTDLLAK 265

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A7S0ZFV8_9RHOD (30S ribosomal protein S5, chloroplastic (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFV8_9RHOD)

HSP 1 Score: 336 bits (862), Expect = 1.040e-113
Identity = 180/260 (69.23%), Postives = 198/260 (76.15%), Query Frame = 0

Query:    1 MVESGRGGHPGGFG--------------RGGERGXXXXXXXXXXXXXXQEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLS-GLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNP 245
            M E GRGG P GFG              RGG  G               +E KEWVP+TKLGRLVK+GHI+SLE IFL+SIP+KE+QI+E  L   L DEVLKIM VQKQTRAGQRTRFKAFVVVGD+ GHVGLGVKSAKEVATAIRGAI+ S L IVPVRRGYWG  I  PHTVPCKVTGKCGSVS+RLVPAPRGTGLVAARVPKKLLQ AG EDCF+SS GHTRTLGNFAKATF AI+ TY +L+P+ W ET+F+  P
Sbjct:   13 MAEEGRGGFPEGFGGXXXXXXXXXXXXGRGGRGGKDRKGPRR------SDEPKEWVPVTKLGRLVKQGHIQSLEHIFLYSIPIKEHQIVEHFLGKALHDEVLKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKSAKEVATAIRGAIIASMLAIVPVRRGYWGNKIGTPHTVPCKVTGKCGSVSLRLVPAPRGTGLVAARVPKKLLQFAGYEDCFTSSDGHTRTLGNFAKATFQAISHTYGFLTPDLWIETKFSSGP 266

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BLAST of Gcaud8094.t1 vs. uniprot
Match: I0Z8T1_COCSC (Ribosomal protein S2 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z8T1_COCSC)

HSP 1 Score: 336 bits (862), Expect = 1.040e-113
Identity = 164/230 (71.30%), Postives = 197/230 (85.65%), Query Frame = 0

Query:   35 QEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALL-SGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTAPIPTIG 263
            ++EE++WVP TKLGRLV++G I+SLE+IFLFS+PVKEYQI+E  L S L+DEV+KIM VQKQTRAGQRTRFKAFVVVGD  GHVGLGVK AKEVATAIRGAI+ +K+++VPVRRGYWG  I +PHTVP KVTGKCGSVSVRL+PAPRG G+VAAR PKK+LQMAG+EDC++S+TG T+TLGNF KATFYA+  TY YLSPE W  TR+ K+P Q +++ LAK    PT+G
Sbjct:   30 KDEEEKWVPCTKLGRLVQQGKIKSLEQIFLFSLPVKEYQIVENFLGSALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDHNGHVGLGVKCAKEVATAIRGAIIQAKMSVVPVRRGYWGNKIGKPHTVPTKVTGKCGSVSVRLIPAPRGAGIVAARTPKKVLQMAGIEDCYTSATGSTKTLGNFVKATFYALRATYGYLSPELWTATRYTKSPMQEFTDFLAK----PTVG 255

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BLAST of Gcaud8094.t1 vs. uniprot
Match: A0A6G1D2H5_9ORYZ (S5 DRBM domain-containing protein n=4 Tax=Poaceae TaxID=4479 RepID=A0A6G1D2H5_9ORYZ)

HSP 1 Score: 335 bits (860), Expect = 3.040e-113
Identity = 162/230 (70.43%), Postives = 197/230 (85.65%), Query Frame = 0

Query:   35 QEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLSGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTAPIPTIGA 264
            ++EE++WVP+TKLGRLVK+  I+ +EEI+L S+PVKE+QI+E L+ GL+DEV+KI  VQKQTRAGQRTRFKAFVVVGD+ GHVGLGVK AKEVATAIRGAI+ +KL++VPVRRGYWG  I QPHTVPCKVTGKCGSV+VR+VPAPRG+G+VAARVPKK+LQ AG+ED F+SS G T+TLGNF KATF  + KTY +L+P+FWRETRF K PFQ Y++ LAK   +  I A
Sbjct:   41 RQEEEKWVPVTKLGRLVKDDKIKKIEEIYLHSLPVKEHQIVEQLVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGQPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTPFQEYTDFLAKPTKVLMIEA 270

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BLAST of Gcaud8094.t1 vs. uniprot
Match: I1PGJ3_ORYGL (S5 DRBM domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=I1PGJ3_ORYGL)

HSP 1 Score: 335 bits (859), Expect = 3.640e-113
Identity = 161/230 (70.00%), Postives = 197/230 (85.65%), Query Frame = 0

Query:   35 QEEEKEWVPMTKLGRLVKEGHIRSLEEIFLFSIPVKEYQIIEALLSGLQDEVLKIMAVQKQTRAGQRTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYWGAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLEDCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYSELLAKTAPIPTIGA 264
            ++EE++WVP+TKLGRLVKEG    +EEI+L S+PVKE+QI+E L+ GL+DEV+KI  VQKQTRAGQRTRFKAFVVVGD+ GHVGLGVK AKEVATAIRGAI+ +KL++VPVRRGYWG  I QPHTVPCKVTGKCGSV+VR+VPAPRG+G+VAARVPKK+LQ AG+ED F+SS G T+TLGNF KATF  + +TY +L+P+FWR+T+F K+PFQ Y++LLAK      I A
Sbjct:   36 RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQIVETLVPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGQPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMRTYGFLTPDFWRDTKFVKSPFQEYTDLLAKPTKALMIDA 265

The following BLAST results are available for this feature:

BLAST of Gcaud8094.t1 vs. uniprot

BLAST of Gcaud8094.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7Q5Q8_CHOCR	1.290e-158	91.73	30S ribosomal protein S5, chloroplastic n=2 Tax=Rh...	[more]
A0A1X6NVL2_PORUM	7.340e-121	76.52	30S ribosomal protein S5, chloroplastic n=1 Tax=Po...	[more]
A0A5J4Z471_PORPP	2.050e-116	77.73	30S ribosomal protein S5, chloroplastic n=1 Tax=Po...	[more]
A0A6J5WHV5_PRUAR	1.610e-114	66.41	S5 DRBM domain-containing protein n=7 Tax=Prunus T...	[more]
A0A388K2A9_CHABU	5.290e-114	69.73	S5 DRBM domain-containing protein n=1 Tax=Chara br...	[more]
A0A022R9Q2_ERYGU	8.040e-114	67.92	S5 DRBM domain-containing protein n=8 Tax=Lamiales...	[more]
A0A7S0ZFV8_9RHOD	1.040e-113	69.23	30S ribosomal protein S5, chloroplastic (Fragment)...	[more]
I0Z8T1_COCSC	1.040e-113	71.30	Ribosomal protein S2 component of cytosolic 80S ri...	[more]
A0A6G1D2H5_9ORYZ	3.040e-113	70.43	S5 DRBM domain-containing protein n=4 Tax=Poaceae ...	[more]
I1PGJ3_ORYGL	3.640e-113	70.00	S5 DRBM domain-containing protein n=2 Tax=Oryza Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.20		coord: 40..144 e-value: 1.7E-49 score: 168.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR13718:SF95	SUBFAMILY NOT NAMED	coord: 5..256
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 77..147
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 166..238 e-value: 1.2E-23 score: 82.3
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 145..238 e-value: 1.5E-47 score: 161.8
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 36..242 e-value: 2.6E-92 score: 306.0
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 82..146 e-value: 6.4E-28 score: 96.5
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 82..145 score: 23.502337
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 5..256
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 99..131
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 158..238

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_211_length_36859_cov_4.689676	contig	NODE_211_length_36859_cov_4.689676:19637..20431 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8094.t1	Gcaud8094.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_211_length_36859_cov_4.689676 19637..20431 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8094.t1 ID=Gcaud8094.t1|Name=Gcaud8094.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=265bp
MVESGRGGHPGGFGRGGERGRGRDRGRGRGRGRRQEEEKEWVPMTKLGRL
VKEGHIRSLEEIFLFSIPVKEYQIIEALLSGLQDEVLKIMAVQKQTRAGQ
RTRFKAFVVVGDSKGHVGLGVKSAKEVATAIRGAIVDSKLNIVPVRRGYW
GAAIDQPHTVPCKVTGKCGSVSVRLVPAPRGTGLVAARVPKKLLQMAGLE
DCFSSSTGHTRTLGNFAKATFYAIAKTYAYLSPEFWRETRFAKNPFQVYS
ELLAKTAPIPTIGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005324	Ribosomal_S5_C
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR005711	Ribosomal_S5_euk/arc
IPR013810	Ribosomal_S5_N
IPR000851	Ribosomal_S5
IPR018192	Ribosomal_S5_N_CS
IPR020568	Ribosomal_S5_D2-typ_fold