Gcaud2634.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2634.t1
Unique NameGcaud2634.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length303
Homology
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A2V3IRC2_9FLOR (Trifunctional purine biosynthetic protein adenosine-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC2_9FLOR)

HSP 1 Score: 352 bits (903), Expect = 5.900e-119
Identity = 165/220 (75.00%), Postives = 200/220 (90.91%), Query Frame = 0
Query:   78 SVKCSVSKPPH--NELMRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRIA 295
            + +CS+S+  +  +EL+RIAV+VSG GRSLQN+CE+I++  ++GC++SLV+ASKPSAGAI RAE FGVPTRVVRQKDF+GN+E FS+ IS + DEF +DLV+MAGWMHFYQIP+RYDG+VINIHPSLIPSFCGKGYYG+RVHEAVIKFGAK++GCTVHLADN+YDHGPII+QK VPVFDTD  ++LA RVFEKEKEALPEAIQLFV+ RLS+ENGIVRI+
Sbjct:   69 AAECSMSETQNAQSELLRIAVLVSGSGRSLQNLCEKIHSDHLRGCEISLVIASKPSAGAIQRAENFGVPTRVVRQKDFNGNIEAFSDTISHVLDEFQVDLVIMAGWMHFYQIPTRYDGRVINIHPSLIPSFCGKGYYGSRVHEAVIKFGAKVSGCTVHLADNKYDHGPIILQKPVPVFDTDDADDLARRVFEKEKEALPEAIQLFVEGRLSVENGIVRIS 288          
BLAST of Gcaud2634.t1 vs. uniprot
Match: R7QPB0_CHOCR (Formyl_trans_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPB0_CHOCR)

HSP 1 Score: 291 bits (744), Expect = 8.090e-95
Identity = 133/202 (65.84%), Postives = 172/202 (85.15%), Query Frame = 0
Query:   93 RIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRI 294
            R+AV+VSGGGRSL+N+CE+I+ G +  C VSLV+ASK +AGAI +AE+  +PT V+R +DF+ +   FS+AIS + DE+ IDLVV+AGWMHFY IP RY+GKV+NIHPSLIP+FCGKGYYG+RVHEAV++FGAK+TGCTVHLADN+YDHGPII+QKAVPV D+D  ++LAARVFE EKEALPEAIQ+ V  +L ++  ++R+
Sbjct:   81 RVAVLVSGGGRSLENICEKIDAGTLTCCGVSLVIASKKTAGAIEKAERRAIPTSVLRLRDFERDTARFSDAISNVLDEYNIDLVVLAGWMHFYLIPPRYEGKVVNIHPSLIPAFCGKGYYGHRVHEAVLEFGAKVTGCTVHLADNKYDHGPIILQKAVPVLDSDYADDLAARVFEAEKEALPEAIQMLVAGKLWVDGRLIRV 282          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A7S2ZBP6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBP6_9RHOD)

HSP 1 Score: 267 bits (682), Expect = 8.980e-86
Identity = 128/208 (61.54%), Postives = 161/208 (77.40%), Query Frame = 0
Query:   92 MRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRIAGTKT 299
            M IAV++SGGGRSL+N+  +I +G +    V  V+ASK +AG + +AE  G+PTRV+  KDFD   E FS+AI+   DEFG+DLVV+AGWMHFY+IP RY GKV+NIHPSLIP+FCGKGYYG RVH AV+ FGAKITGCTVH ADNEYDHGPII+Q++VPV + D  E LAARVFE EK ALP+A++L  +DR+ I+   V+I   +T
Sbjct:   59 MDIAVLLSGGGRSLENILRKIESGDLADVNVKCVLASKKTAGGLGKAESRGIPTRVLAPKDFD-TTEEFSDAITSSLDEFGVDLVVLAGWMHFYRIPDRYLGKVVNIHPSLIPAFCGKGYYGERVHRAVLDFGAKITGCTVHFADNEYDHGPIILQRSVPVEEDDDDESLAARVFESEKLALPDALRLLAEDRVIIDGRRVKICPLQT 265          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A7S0G3D9_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3D9_9RHOD)

HSP 1 Score: 258 bits (658), Expect = 3.520e-83
Identity = 121/194 (62.37%), Postives = 154/194 (79.38%), Query Frame = 0
Query:   92 MRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRL 285
            M IAV++SGGGRSL+NV ++I +G + G  V  V+ASK +AG + +AE+ G+PTRV+  K+FD   E FS+AI+   DEFG+DL V+AGWMHFY+IP  + GKV+NIHPSLIP+FCGKGYYG RVH AV+ FGAK+TGCTVH ADNEYDHGPII+Q++VPV + D  E LAARVFE EK ALPEA+ L  ++R+
Sbjct:    3 MDIAVLLSGGGRSLENVLQKIESGDLAGVNVKCVLASKKTAGGLGKAERRGIPTRVLAPKEFD-TTEEFSDAITSSLDEFGVDLAVLAGWMHFYRIPDHHLGKVVNIHPSLIPAFCGKGYYGERVHRAVLDFGAKVTGCTVHFADNEYDHGPIILQRSVPVEEEDNDESLAARVFESEKLALPEALGLLAENRV 195          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A5J4YVS8_PORPP (Trifunctional purine biosynthetic protein adenosine-3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVS8_PORPP)

HSP 1 Score: 247 bits (630), Expect = 1.510e-77
Identity = 116/208 (55.77%), Postives = 158/208 (75.96%), Query Frame = 0
Query:   90 ELMRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGN--VENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRIA 295
            E ++ AV++SGGGRSL+N+  +I    +   +++ V+ASKPSAG I RA    +PT V+R +DF+G   V+ FS AI+ + D   ++LVV+AGWMHFY IP+R++ +VINIHPSL+PSFCGKGYYG +VH+AV+ FGAK+TGCTVH ADN+YDHG II+Q+ V V D DT + LAARVFE+EK AL +A+QL+VD +L +E   V+ A
Sbjct:   81 EGVKTAVLLSGGGRSLENLIVRIEQKTLTNVEIACVIASKPSAGGIERARARSIPTHVIRPRDFEGEDTVQRFSAAINDVLDRHAVELVVLAGWMHFYLIPTRFEHRVINIHPSLLPSFCGKGYYGEKVHKAVLDFGAKVTGCTVHFADNQYDHGAIIVQRPVMVEDDDTVDTLAARVFEEEKNALAQAVQLYVDKKLVLEGRRVKFA 288          
BLAST of Gcaud2634.t1 vs. uniprot
Match: M1UXB1_CYAM1 (Phosphoribosylglycinamide formyltransferase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXB1_CYAM1)

HSP 1 Score: 234 bits (596), Expect = 1.270e-72
Identity = 115/220 (52.27%), Postives = 154/220 (70.00%), Query Frame = 0
Query:   75 LYVSVKCSVSKPPHNELMRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRI 294
            LY S            + R+ V+VSG GRSL+N+ ++I+ G + G Q+ +VVAS+    A+ RA Q  VP  VV  + F  + + FSEAI+ +   + +DLVVMAG+MHFY+IP RY  +V+NIHP+L+P+FCG+G+YGNRVH+AV+ FGAK+TG TVH ADNEYDHGPI++Q AVPV D DT E LAARVF +E   LPEA++LF  D L ++   VRI
Sbjct:   54 LYASAVRPGDAAAAGRVKRVGVLVSGTGRSLENLLQRIHTGTLLGAQIVVVVASRADCFALERAAQRHVPAEVVAARAFS-DTDRFSEAITEVLVAYRVDLVVMAGFMHFYRIPPRYANRVLNIHPALLPAFCGRGFYGNRVHQAVLDFGAKVTGVTVHFADNEYDHGPIVLQSAVPVLDEDTVETLAARVFAEECRLLPEAVELFCQDALILDGRRVRI 272          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A7J7IH20_9RHOD (Formyl_trans_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IH20_9RHOD)

HSP 1 Score: 231 bits (589), Expect = 1.400e-71
Identity = 123/244 (50.41%), Postives = 168/244 (68.85%), Query Frame = 0
Query:   53 KAPNYPFVS--GKLNTKAHLRVAPLYVSVKCSVSKPPHNELMRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRI 294
            K P  P  S  G   + A  R  PL   +  +   P H +  R+AV+VSG GRSL+N+ +Q+ +G ++  Q+ +VVAS+    A+ RA Q+ VPT VV  + +  + + FS+AIS + D + +DLVVMAG+MHFY+IP+RY  +V+NIHP+L+P+FCG+G+YG+RVH+AV+ FGAKITG TVH ADNEYDHGPI++Q+AVPV D DT   L ARVF +E   LPEAI LF  D L ++   VRI
Sbjct:   32 KLPQRPRSSELGWQRSAARARGPPLR-RLAATAGTPSHCK--RVAVLVSGTGRSLENLLQQVKSGALERTQIVVVVASRTDCLAVERAAQWQVPTAVVVARAY-ADSDAFSDAISVVLDSYQVDLVVMAGFMHFYRIPTRYLNRVLNIHPALVPAFCGRGFYGDRVHQAVLDFGAKITGVTVHFADNEYDHGPIVLQRAVPVLDDDTVATLGARVFAEECRLLPEAIDLFCRDALVLDGRRVRI 271          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A136MAF9_9BACT (Phosphoribosylglycinamide formyltransferase n=5 Tax=Planctomycetes TaxID=203682 RepID=A0A136MAF9_9BACT)

HSP 1 Score: 226 bits (576), Expect = 1.720e-70
Identity = 107/203 (52.71%), Postives = 152/203 (74.88%), Query Frame = 0
Query:   92 MRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRI 294
            +R+ V++SGGG +LQN  +QI  G++    + +V++SKP+A  + RA +  + T ++   D++ ++E FS AI+   D+  IDLVV+AG++HFY+IP +Y G+V+NIHP LIP+FCG  YYG +VHEAVI +GAK++GCTVH ADN YD+GP+IIQ+AVPV + DT + LAARVF++E EA PEAI+LF + RL IE   VRI
Sbjct:    5 IRLGVLISGGGNTLQNFIDQIEAGKLP-ATIQIVISSKPNAAGLDRARKHNLCTAIIPYSDYN-DIEAFSHAITNELDKHPIDLVVLAGFVHFYKIPEQYKGRVMNIHPGLIPAFCGHNYYGKKVHEAVINYGAKVSGCTVHFADNVYDNGPVIIQRAVPVLEDDTPDTLAARVFKEECEAYPEAIRLFAEGRLKIEGRKVRI 205          
BLAST of Gcaud2634.t1 vs. uniprot
Match: M2Y0V2_GALSU (Phosphoribosylglycinamide formyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0V2_GALSU)

HSP 1 Score: 227 bits (579), Expect = 6.340e-70
Identity = 110/203 (54.19%), Postives = 146/203 (71.92%), Query Frame = 0
Query:   92 MRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRI 294
            ++ AV VSGGGRSL+N+    + G ++  Q+  VV+SK    A+  A+ + VP +VV  +++  N E FS+A+  +   +G+ L+V+AGW+HF+ IP  + G+VINIHPSLIPSFCGKGYYG  VH+AV+ FG KITGCTVH ADNEYDHGPII+QKAV V +TDT + L+ RVFE EK ALPEAI+LF    L +E   V+I
Sbjct:   74 VKTAVFVSGGGRSLENLLRYCDKGALEETQIVTVVSSKNGTKALEIAKNWSVPAQVVSPRNYPSNTE-FSQALVDVCASYGVSLIVLAGWLHFFHIPPSFQGRVINIHPSLIPSFCGKGYYGMNVHKAVLDFGVKITGCTVHFADNEYDHGPIILQKAVDVLETDTVDTLSRRVFEAEKVALPEAIRLFSKGLLKLEGRRVKI 275          
BLAST of Gcaud2634.t1 vs. uniprot
Match: A0A1X6NTC6_PORUM (Formyl_trans_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTC6_PORUM)

HSP 1 Score: 226 bits (577), Expect = 1.190e-69
Identity = 109/218 (50.00%), Postives = 152/218 (69.72%), Query Frame = 0
Query:   84 SKPPHNELMRIAVMVSGGGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQKDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHPSLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAVPVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRIAGTKTQP 301
            ++PP    +R AV+VSGGGRSL N+ +++ +G++    + LVVASK SAGA+  A   G+P+ V+  + + G+    S AIS   DE G+ LVV+AGW+HFY IP RY G+V+N+HPSLIP+FCG+GYYG+ VH AV+ FG K+TGCTVHL DNE+DHGPII+Q+ V V    T +E+AA VFE+EK AL +A+  +   RL++   +VR+      P
Sbjct:   41 ARPP----VRTAVLVSGGGRSLVNLLDRVADGRLCHVAIVLVVASKASAGALGHAAAAGIPSAVLSPRAYPGDAAAHSGAISSALDEAGVGLVVLAGWLHFYAIPDRYAGRVLNVHPSLIPAFCGRGYYGHHVHAAVVAFGVKVTGCTVHLCDNEFDHGPIIVQRPVAVAAGMTPDEVAAAVFEEEKVALADAVGAYAAGRLALRGRVVRVLAEGEAP 254          
The following BLAST results are available for this feature:
BLAST of Gcaud2634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRC2_9FLOR5.900e-11975.00Trifunctional purine biosynthetic protein adenosin... [more]
R7QPB0_CHOCR8.090e-9565.84Formyl_trans_N domain-containing protein n=1 Tax=C... [more]
A0A7S2ZBP6_9RHOD8.980e-8661.54Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G3D9_9RHOD3.520e-8362.37Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A5J4YVS8_PORPP1.510e-7755.77Trifunctional purine biosynthetic protein adenosin... [more]
M1UXB1_CYAM11.270e-7252.27Phosphoribosylglycinamide formyltransferase n=1 Ta... [more]
A0A7J7IH20_9RHOD1.400e-7150.41Formyl_trans_N domain-containing protein n=1 Tax=C... [more]
A0A136MAF9_9BACT1.720e-7052.71Phosphoribosylglycinamide formyltransferase n=5 Ta... [more]
M2Y0V2_GALSU6.340e-7054.19Phosphoribosylglycinamide formyltransferase n=1 Ta... [more]
A0A1X6NTC6_PORUM1.190e-6950.00Formyl_trans_N domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004607Phosphoribosylglycinamide formyltransferaseTIGRFAMTIGR00639TIGR00639coord: 92..287
e-value: 5.3E-51
score: 170.9
IPR004607Phosphoribosylglycinamide formyltransferaseHAMAPMF_01930PurNcoord: 93..283
score: 25.567959
IPR004607Phosphoribosylglycinamide formyltransferaseCDDcd08645FMT_core_GARTcoord: 93..280
e-value: 1.41023E-81
score: 242.678
IPR002376Formyl transferase, N-terminalPFAMPF00551Formyl_trans_Ncoord: 92..277
e-value: 2.8E-42
score: 144.5
NoneNo IPR availableGENE3D3.40.50.170coord: 78..302
e-value: 1.6E-59
score: 202.7
NoneNo IPR availablePANTHERPTHR43369PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASEcoord: 91..288
IPR036477Formyl transferase, N-terminal domain superfamilySUPERFAMILY53328Formyltransferasecoord: 92..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_205_length_37462_cov_4.544219contigNODE_205_length_37462_cov_4.544219:27552..28545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2634.t1Gcaud2634.t1Gracilaria caudata M_176_S67 malemRNANODE_205_length_37462_cov_4.544219 27552..28545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2634.t1 ID=Gcaud2634.t1|Name=Gcaud2634.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=303bp
MCFRGNVFLKCCELSAGIPSFVQTHRITILDNASFDNHNLEHGGIQANTC
NRKAPNYPFVSGKLNTKAHLRVAPLYVSVKCSVSKPPHNELMRIAVMVSG
GGRSLQNVCEQINNGQMKGCQVSLVVASKPSAGAIPRAEQFGVPTRVVRQ
KDFDGNVENFSEAISRLFDEFGIDLVVMAGWMHFYQIPSRYDGKVINIHP
SLIPSFCGKGYYGNRVHEAVIKFGAKITGCTVHLADNEYDHGPIIIQKAV
PVFDTDTTEELAARVFEKEKEALPEAIQLFVDDRLSIENGIVRIAGTKTQ
PH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004607GART
IPR002376Formyl_transf_N
IPR036477Formyl_transf_N_sf