Gcaud690.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud690.t1
Unique NameGcaud690.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length271
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud690.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 104..226
e-value: 5.9E-11
score: 42.3
NoneNo IPR availableGENE3D3.40.50.11980coord: 51..258
e-value: 5.7E-24
score: 86.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2059_length_7001_cov_4.774096contigNODE_2059_length_7001_cov_4.774096:3688..4605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud690.t1Gcaud690.t1Gracilaria caudata M_176_S67 malemRNANODE_2059_length_7001_cov_4.774096 3688..4605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud690.t1 ID=Gcaud690.t1|Name=Gcaud690.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=271bp
MSSDCRRFRCTICKKGNETRLIPSQKQAKKGCTEKRQTVVKGKSETNYEL
SKETTANITRRHATPRRSPTLPKQESTTRKTLRPLAAATMAKSEVSISDT
PPDVVLDGQNVARFRRESETSDRPLPALRGEQLKKALQFFEKKGMKPVAV
LPKSTVQNRKDRPQRGKHAADSENRDIINELHKKGWVFYTESGTHDDYYA
VSLGIRNNMLIISNDKYRIKKDSDNQGFKHQESQGEEEELRNFLEDKRIG
FEFNGNGSFVLKSSTSVLRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN