Gcaud1926.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1926.t2
Unique NameGcaud1926.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length170
Homology
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A2V3IPW4_9FLOR (CS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW4_9FLOR)

HSP 1 Score: 261 bits (668), Expect = 2.640e-87
Identity = 127/165 (76.97%), Postives = 147/165 (89.09%), Query Frame = 0
Query:    5 MSASKVLTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSGGSTSDEEDEANPAPKASDK 169
            MSASK+LTPEFLWAQRKD +YLTINVPN+KKA++T+ +TDDG +YFKGPGGAVGHEAEY+LDI LFKPIKA QS++K+T R V FKI KA  GPYW+RLLK EGRN+HCKIDW+NWKDEDXXXXXY+FG+QF DSKDLQDMDFGSGGSTSDEE+E +    AS+K
Sbjct:    1 MSASKLLTPEFLWAQRKDLIYLTINVPNIKKAQSTVNITDDGRIYFKGPGGAVGHEAEYVLDITLFKPIKAAQSQHKITPRLVSFKIAKAAPGPYWERLLKAEGRNVHCKIDWDNWKDEDXXXXXYNFGTQFGDSKDLQDMDFGSGGSTSDEEEEVDATVDASNK 165          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A1X6NMP1_PORUM (CS domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMP1_PORUM)

HSP 1 Score: 180 bits (457), Expect = 2.540e-55
Identity = 83/145 (57.24%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    6 SASKVLTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSG 150
            ++S  LTPEF WAQRK  VY+T+NV NV+  +TT +++DDGH+Y++G GG +G E EY+LDI L KPIK  +S  K+++R V+FKI KA+SGPYW+RLL  E RN+HCKIDW+ WKDED     Y FGS +  +KDL D+DFG G
Sbjct:    3 ASSGPLTPEFRWAQRKGDVYITMNVANVRPEQTTARISDDGHIYWRGYGGVLGDEREYVLDIRLLKPIKTSESSIKLSSRLVYFKIRKAESGPYWERLLADESRNVHCKIDWDAWKDEDEEDDYY-FGSNWG-NKDLADLDFGDG 145          
BLAST of Gcaud1926.t2 vs. uniprot
Match: M2X9T6_GALSU (CS domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X9T6_GALSU)

HSP 1 Score: 164 bits (414), Expect = 1.550e-48
Identity = 77/145 (53.10%), Postives = 108/145 (74.48%), Query Frame = 0
Query:   13 PEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSGGSTSDEE 157
            P+F WAQRKD+++LT++VPNV K +  I +TD+G V FKG GG +  +A+Y L++ L  PIKA++SKY +TAR + F I+K ++G YW+RLLK  G+NIHCK+DWE+WKDED     + FGS + DSKD+ D+DFGS   +S +E
Sbjct:    5 PDFYWAQRKDKLFLTVDVPNVDKNQAQIHLTDEGKVSFKGKGGELHEKADYELNLELLHPIKAEESKYHITARNIQFVIMKKETGSYWERLLKQPGKNIHCKVDWEHWKDEDSEDE-FDFGSAW-DSKDMADLDFGSDKESSSDE 147          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7S3ENU4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENU4_9RHOD)

HSP 1 Score: 155 bits (393), Expect = 1.790e-45
Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 0
Query:   11 LTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFG 148
            L PEFLWAQ KD +Y+TI +PNV+ ++  IKV D+G +YFKG GG  G E  Y + + L  PIKA  +K  V AR+V  KIVK + GPYW+RLLK   +N+HCKIDW +W DED     Y+FGS + ++KD  D+DFG
Sbjct:    5 LHPEFLWAQTKDMIYMTITIPNVRSSDAQIKVLDEGSIYFKGTGGPAGDEHLYEMSVQLLHPIKASDTKCSVEARSVQLKIVKNEKGPYWERLLKDTKKNVHCKIDWNHWTDEDEEDD-YNFGSNW-ENKDAGDLDFG 140          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7J7IR48_9RHOD (Prostaglandin E synthase 3 (Cytosolic) n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IR48_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 3.380e-43
Identity = 74/139 (53.24%), Postives = 96/139 (69.06%), Query Frame = 0
Query:   12 TPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSG 150
            TP+F WAQRKD+V++T+ VPNVKK    +KVT +G VYFKG GG +GHE EY LDI L   IKAD+++  V AR V+F + KA++G +W RLL   GRN+H  +DW  W DED     + FGS F  S+D+ D+DFG G
Sbjct:   58 TPDFSWAQRKDKVFVTVKVPNVKKDTAILKVTPEGQVYFKGIGGELGHEREYELDIRLLHEIKADEAQCGVQARQVYFVLPKAEAGQWWSRLLHDPGRNVHLSVDWGLWVDEDEDDQ-FDFGSHFG-SRDMADLDFGMG 194          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7S3ABQ5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABQ5_9RHOD)

HSP 1 Score: 145 bits (367), Expect = 4.740e-42
Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 0
Query:   11 LTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFG 133
            L PEFLWAQ KD +Y+TI +PNV+ ++  IKV D+G +YFKG GG  G E  Y + + L  PIKA  +K  V AR+V  KIVK + GPYW+RLLK   +N+HCKIDW +W DED     Y+FG
Sbjct:    5 LHPEFLWAQTKDMIYMTITIPNVRSSDAQIKVLDEGSIYFKGTGGPAGDEHLYEMSVQLLHPIKASDTKCSVEARSVQLKIVKNEKGPYWERLLKDTKKNVHCKIDWNHWTDEDEEDD-YNFG 126          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A5J4Z143_PORPP (CS domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z143_PORPP)

HSP 1 Score: 138 bits (347), Expect = 2.570e-38
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   13 PEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFG 148
            P++LWAQ KD++++TI VPNV K    +++ D+G + F+G GG  G E EY L I L  PI A  S+Y V AR +  K+ KA SGPYWD+L K   ++IHCK+DW++W DED       FG+ ++ + DL D+DFG
Sbjct:   19 PDYLWAQTKDELWVTIAVPNVSKEGAVVQLFDEGRIEFQGTGGVQGEEKEYCLKIELLHPIDAAASRYNVGARNIELKVKKASSGPYWDKLTKE--KDIHCKVDWDHWVDEDEEKAP-DFGASWSGADDLADLDFG 151          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7S0XJ58_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJ58_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 3.590e-37
Identity = 75/155 (48.39%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   10 VLTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKAD-SGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSGGSTSDEEDEANPA 163
            +LTPEFLWAQ   ++Y+TI+VPNVKK    + + D G VYFKG GGA   E  Y L + L   I A  SKY + AR +  KI K D S P+W  LLK  G+N+HCKIDW++WKDED       FGS + DS D+ ++ FG      D  D+A PA
Sbjct:    1 MLTPEFLWAQSATELYVTISVPNVKKDGAVVVIEDSGEVYFKGVGGAEKQEQTYELKVELLNEIDASASKYNIGARNIEMKIAKKDASAPFWPYLLKG-GKNVHCKIDWDHWKDEDEDDQV-DFGSAW-DSGDMSNLPFG------DHSDQAGPA 146          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7S1TPI8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TPI8_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 7.950e-34
Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 0
Query:    9 KVLTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGP-YWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFGSG 150
            ++LTPEFLWAQ   +V++TI VPNV+K    + V DDG +YF+G GG    E EY L + L   ++A +SK+ V AR V  KI K D    +W +LLK  G+N+HCKIDW++W+DED       FGS + DS D+ ++ F  G
Sbjct:    3 EMLTPEFLWAQSGGEVFVTICVPNVRKESAEVSVKDDGSLYFRGVGGVEREEREYELKVELLHEVRASESKWNVGARAVEMKIAKKDKDAGFWPKLLKG-GKNVHCKIDWDHWRDEDEEENV-DFGSAW-DSGDISNLPFDGG 142          
BLAST of Gcaud1926.t2 vs. uniprot
Match: A0A7S0QSK2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSK2_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 8.250e-27
Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 0
Query:   11 LTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYFKGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYWDRLLKPEGRNIHCKIDWENWKDEDXXXXXYSFGSQFADSKDLQDMDFG 148
            L+P F WA+R D+VYLTI V +VK  E  I +TD+G V FKG GG+     EY LD+ LFK IK D+SK+  + R +   ++K + G YW RLL    +  +CK+DW  WKDED       FG           MDFG
Sbjct:    3 LSPTFTWAERTDKVYLTIEVQDVK--EPQIDLTDEGKVSFKGKGGS--ENKEYALDVQLFKGIKKDESKWAASDRHIVCVLIKQEEG-YWARLLPSGVKMNNCKVDWNLWKDEDEDQTEADFGG----------MDFG 125          
The following BLAST results are available for this feature:
BLAST of Gcaud1926.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPW4_9FLOR2.640e-8776.97CS domain-containing protein n=1 Tax=Gracilariopsi... [more]
A0A1X6NMP1_PORUM2.540e-5557.24CS domain-containing protein n=1 Tax=Porphyra umbi... [more]
M2X9T6_GALSU1.550e-4853.10CS domain-containing protein n=1 Tax=Galdieria sul... [more]
A0A7S3ENU4_9RHOD1.790e-4552.90Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IR48_9RHOD3.380e-4353.24Prostaglandin E synthase 3 (Cytosolic) n=1 Tax=Cya... [more]
A0A7S3ABQ5_9RHOD4.740e-4253.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z143_PORPP2.570e-3847.06CS domain-containing protein n=1 Tax=Porphyridium ... [more]
A0A7S0XJ58_9RHOD3.590e-3748.39Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S1TPI8_9RHOD7.950e-3446.15Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0QSK2_9CHLO8.250e-2744.20Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 14..93
e-value: 5.9E-10
score: 40.0
IPR007052CS domainPROSITEPS51203CScoord: 10..104
score: 18.345163
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 11..136
e-value: 1.2E-33
score: 118.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 11..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..169
NoneNo IPR availablePANTHERPTHR22932:SF1CO-CHAPERONE PROTEIN DAF-41coord: 5..160
NoneNo IPR availableCDDcd06465p23_hB-ind1_likecoord: 13..121
e-value: 6.09377E-36
score: 118.851
IPR045250Co-chaperone protein p23-likePANTHERPTHR22932TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONEcoord: 5..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_105_length_50300_cov_4.471768contigNODE_105_length_50300_cov_4.471768:21544..22161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1926.t2Gcaud1926.t2Gracilaria caudata M_176_S67 malemRNANODE_105_length_50300_cov_4.471768 21544..22161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1926.t2 ID=Gcaud1926.t2|Name=Gcaud1926.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=170bp
MRQDMSASKVLTPEFLWAQRKDQVYLTINVPNVKKAETTIKVTDDGHVYF
KGPGGAVGHEAEYILDINLFKPIKADQSKYKVTARTVFFKIVKADSGPYW
DRLLKPEGRNIHCKIDWENWKDEDEDEDEYSFGSQFADSKDLQDMDFGSG
GSTSDEEDEANPAPKASDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR008978HSP20-like_chaperone
IPR045250p23-like