Gcaud1931.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1931.t1
Unique Name	Gcaud1931.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	304

Homology

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BLAST of Gcaud1931.t1 vs. uniprot
Match: A0A2V3IPW1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW1_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 7.590e-92
Identity = 145/230 (63.04%), Postives = 186/230 (80.87%), Query Frame = 0

Query:   73 QKPSCDNTVSSSGTSSVQKVISPPLGSRIEVLWRIDYDSDEADKMDVDPSAEGPQAVTRWWGATIQDCLKETVGSRCPQHADRKVYVLLYDAYQEFAEDTATVAFVSDDSLIDLSQLDDVNHGELQWRMENASDKQAGSNAEDIAQLVSLEQYAAQVSAAVEGAGLSEEADLQVLSTLPPHVQAQVASGYRRFADHIKSSLATFMQEKPKDYIVTKADVQQMFASMHSKP 302
            Q+PS   T   + T   +K I PP+GSRIEVLW+IDY +D  DKM+VD + E    VTRWWGAT+QD LKE +GSR P  A+R+++VLLYDAYQEFAEDTATVAF+S D+L+DLSQL+DVN GELQWR E+++ KQ  S  ++ +QLVSLE+YAA +SAAV+ AGL+EE DLQ+LSTLP HVQ++ A+GYRRFAD +K+SL  F+QEKP+DY+VTKADVQ++FAS++S P
Sbjct:   91 QQPSVPPT--KTNTKPTEKPIVPPVGSRIEVLWKIDYGADADDKMEVDTATE-ENTVTRWWGATVQDRLKEALGSRRPDQAERQLHVLLYDAYQEFAEDTATVAFISADTLVDLSQLEDVNKGELQWRFEDSAQKQTDSAQDEKSQLVSLEEYAADLSAAVQDAGLTEETDLQILSTLPLHVQSRFATGYRRFADTLKNSLDKFLQEKPEDYVVTKADVQKVFASIYSHP 317

The following BLAST results are available for this feature:

BLAST of Gcaud1931.t1 vs. uniprot

BLAST of Gcaud1931.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IPW1_9FLOR	7.590e-92	63.04	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_105_length_50300_cov_4.471768	contig	NODE_105_length_50300_cov_4.471768:28996..29907 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1931.t1	Gcaud1931.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_105_length_50300_cov_4.471768 28996..29907 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1931.t1 ID=Gcaud1931.t1|Name=Gcaud1931.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=304bp
MSLPGASQQPEQVSAESRNQPASLPCAQPVEGPAQTQDPAPNNGSSPMLL
PMNSNDITSHQPSTDDKAIFSAQKPSCDNTVSSSGTSSVQKVISPPLGSR
IEVLWRIDYDSDEADKMDVDPSAEGPQAVTRWWGATIQDCLKETVGSRCP
QHADRKVYVLLYDAYQEFAEDTATVAFVSDDSLIDLSQLDDVNHGELQWR
MENASDKQAGSNAEDIAQLVSLEQYAAQVSAAVEGAGLSEEADLQVLSTL
PPHVQAQVASGYRRFADHIKSSLATFMQEKPKDYIVTKADVQQMFASMHS
KPT*