Gcaud2196.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2196.t1
Unique NameGcaud2196.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length620
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
NoneNo IPR availableGENE3D1.10.10.60coord: 402..478
e-value: 1.8E-5
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 600..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:39858..41717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2196.t1Gcaud2196.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 39858..41717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2196.t1 ID=Gcaud2196.t1|Name=Gcaud2196.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=620bp
MDDDDLSQLFTREVRCGVGTMRRPLYFYVGLNKLGRIPVERLINRYGGRT
VSRPQAAETQIVYLIDPLSKPDADGPLVYSVHFVQDCVDAGRLLGLGRYR
IPIRNRRSSNCTPTTPTSPNKVRKSTTITPASTPQKSRKKPSEEEEEAEE
AEEAEEQEHPQRRRTLSRRTPLQPAIDATERKDQEEEKAEEPKHVQRRRT
LPIRSPQRRAIDATEQPDQDEEEGEEPKHVQRRRTLPRRTTLQRAFDATE
RKDQEEEEAEEPKHVQLRRTLPRRTALQRAIDATERKDQEEEEGEEPKHG
QRRGTLLRRSPQRRAIDATERTDQEEEEAEEPKHVQRRRTLPRRTTLQRA
FDATERKDQEEEEAEEPKHVRRRRTLPRRTALQRAIDATERKDQESEILL
EETSPSAPTEPWTSEEDNKLRAICQTIQEQLCAEKRNPARLFHLNTWKTL
QSKNALPCHRTAAQCRQRAVVVHHRTKPQTAAQSRQRAIAVHNRTQPQHQ
ADKAVEMERNKQDKVRKRTQETDDEVHEDEDEIQPVYSERRPAKVQRVST
HDRHAQSNQKPSRTKQFIRSIVRSLSYETQMTQRRVFQVLRANSGDRSRT
KAMLLRERRESERSKRNRR*
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