Gcaud2194.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A2V3J5V6_9FLOR (50S ribosomal protein L3, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5V6_9FLOR) HSP 1 Score: 491 bits (1264), Expect = 2.460e-174 Identity = 240/280 (85.71%), Postives = 258/280 (92.14%), Query Frame = 0
Query: 1 MLRSLRAQWRRIGRSLCTSLSD-AQPTRTLPGFSGEFRPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLRRNEQAPPALRMSTDGIIEWRKKGVVEAI 279
MLRSL A+ R++ RS CTS+SD AQ RTLPGFSGEFRPCGVLARKVGMM+LWD EG RHPITVLCVDRCHVIS+APPNPNDHR RWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPK KL EFGVHEMFKL +GTE+RA+HF+ GQ VDVTGTSIGKGTQGVMKRWGFSGAPATHGTSK HRKGGSIGMSTKPGRVFKGKKMAGRMGNE+VTV NLMVYR+D +RNLIYVRGAVPGNSGNWVRVRDAVKKL+RN +APPALR STDG+IEW+ G+VEAI
Sbjct: 1 MLRSL-ARLRQLSRSFCTSVSDTAQSIRTLPGFSGEFRPCGVLARKVGMMNLWDDEGQRHPITVLCVDRCHVISIAPPNPNDHRDRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKQKLAEFGVHEMFKLPIGTELRASHFAPGQFVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKAHRKGGSIGMSTKPGRVFKGKKMAGRMGNEKVTVQNLMVYRIDADRNLIYVRGAVPGNSGNWVRVRDAVKKLKRNAEAPPALRHSTDGVIEWKNAGLVEAI 279
BLAST of Gcaud2194.t1 vs. uniprot
Match: R7Q360_CHOCR (50S ribosomal protein L3, chloroplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q360_CHOCR) HSP 1 Score: 377 bits (968), Expect = 4.710e-130 Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 0
Query: 49 MSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLRRNEQAPPALRMSTDGIIEWRKKGVVEAI 279
M+LWD GTRHPITVLCVDRCHV+ + PN ND +QRW +QVGAGPKRPYKT KAHRYHCAKAGVEPK KL EF V++MF + +GTE+RANHF VGQ +DVTGTSIGKGTQGVMKRWGF+G PA+HG SK HRKGGSIGMSTKPGRVFKGKKMAG MGNER TV +LMVYR+D RNLIY+RGAVPGNSGNWVRVRDAV+KL+ +APPALR ST+G++EW+K+GVV A+
Sbjct: 1 MNLWDDNGTRHPITVLCVDRCHVLRIREPNTNDRKQRWGVQVGAGPKRPYKTNKAHRYHCAKAGVEPKQKLCEFMVNKMFTIPIGTELRANHFEVGQYIDVTGTSIGKGTQGVMKRWGFAGGPASHGCSKAHRKGGSIGMSTKPGRVFKGKKMAGHMGNERKTVQSLMVYRIDNVRNLIYLRGAVPGNSGNWVRVRDAVRKLKIGMEAPPALRFSTEGVVEWKKEGVVAAL 231
BLAST of Gcaud2194.t1 vs. uniprot
Match: UPI001E1DF405 (50S ribosomal protein L3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF405) HSP 1 Score: 308 bits (790), Expect = 7.290e-101 Identity = 161/242 (66.53%), Postives = 182/242 (75.21%), Query Frame = 0
Query: 12 IGRSLCT----SLSDAQPTRTLPGFSGEFRPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKK 249
+ R LC+ + S A+ T T E R G+LARKVGMM+LWD+ RHPITVLCVDRCHV+ V P ++ R RW +QVGAGP+RPYKT K+ RYH AKAGVEPK ++TEF V + + VGTE+RA+HF GQ VDVTG SIGKG QG MKRWGF G ATHG SK HR GS GMSTKPGR FKGKKMAGRMG ++VTV NL VYRVD RNLIYVRGAVPGNSGNWVRVRDAVKK
Sbjct: 13 LARRLCSYAPQTRSRAEATLTSGPIPPERRRSGLLARKVGMMNLWDSGSIRHPITVLCVDRCHVLQVKEPQISEKRGRWALQVGAGPQRPYKTNKSLRYHFAKAGVEPKQEVTEFLVPKDAVVPVGTELRASHFQPGQFVDVTGISIGKGFQGPMKRWGFKGGNATHGNSKAHRSHGSTGMSTKPGRTFKGKKMAGRMGADKVTVQNLRVYRVDDPRNLIYVRGAVPGNSGNWVRVRDAVKK 254
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A1X6P033_PORUM (50S ribosomal protein L3, chloroplastic n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P033_PORUM) HSP 1 Score: 257 bits (656), Expect = 3.450e-82 Identity = 135/213 (63.38%), Postives = 154/213 (72.30%), Query Frame = 0
Query: 37 RPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGM-STKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVK 248
R GVL RK+GMMSL+D+ GT HPITVLC+DRCHV + PP P+D R R+QV AGP+R + T KA RYH A AGVEPK EF V E L VGT + A HF GQLVDV GT+IGKG QG MKRW F+G A+HG SK HRK G IG ST PGRV+ GKKMAGRMG TV NL V+RVD R L++VRGAVPGN+G WVRVRDA+K
Sbjct: 8 RRVGVLGRKLGMMSLYDSYGTMHPITVLCIDRCHVTAAMPPLPSDPRCLHRLQVAAGPRRAHDTPKAQRYHYAAAGVEPKEIAAEFRVSEAALLPVGTAVTAAHFVPGQLVDVAGTTIGKGFQGTMKRWNFAGGAASHGNSKAHRKPGGIGAGSTVPGRVWPGKKMAGRMGGAPRTVMNLRVFRVDAARGLVFVRGAVPGNAGGWVRVRDALK 220
BLAST of Gcaud2194.t1 vs. uniprot
Match: M2XP97_GALSU (50S ribosomal protein L3, chloroplastic n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XP97_GALSU) HSP 1 Score: 236 bits (601), Expect = 3.980e-73 Identity = 125/221 (56.56%), Postives = 154/221 (69.68%), Query Frame = 0
Query: 40 GVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMS-TKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLRRNEQAPPA 259
GVLARK GMM WD +G HP TV+ +DRC V+ + P D + R +QVGAG +RPY+ +K R H A GVEPK KL EF V E + +GTE+ ANHF VGQ VDV GTS GKGTQG M+RWGF+G A+HG SK HRK GS+G ++P KGKKMAG+MG +RVT+ +L V RVD RNL+Y+ GAVPG+ G+WVRVRDA KK E+ PP+
Sbjct: 84 GVLARKAGMMQYWDEKGIMHPCTVVVIDRCQVVYINPVK--DSKGRVGLQVGAGLERPYQMRKFLRMHFAYNGVEPKKKLAEFRVTEDAIVPIGTELSANHFVVGQYVDVIGTSKGKGTQGAMRRWGFAGQNASHGVSKAHRKIGSVGGGRSRPQETPKGKKMAGKMGRKRVTIQSLEVLRVDAERNLLYLHGAVPGHRGSWVRVRDAKKKPFEPEKVPPS 302
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A7J7ISZ9_9RHOD (50S ribosomal protein L3, chloroplastic n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISZ9_9RHOD) HSP 1 Score: 233 bits (595), Expect = 1.520e-71 Identity = 137/259 (52.90%), Postives = 161/259 (62.16%), Query Frame = 0
Query: 9 WRRIGRSLCTSLSDAQPTR----TLPG---------FSGEFRPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVA--PPN--PNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDV--GTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVK 248
WR RSLCT+ +A P + LP + G R GV+ARK+GM+ WDA G H +TVL VD HVI V P N P W +Q+GAG RPY+ KK HRYHCA AG + K KL EF V V GT I HF GQ +DVTGTS+GKG QGVMKR GFSG PA+HG S THR G+ G PGRVFKGK+M GRMG R TV NL + R+DC+RNL++V G VPG++GNWV VRDAVK
Sbjct: 59 WR--ARSLCTA-REALPLQRRVTVLPPPSEEPLTELYQGLVRRLGVIARKIGMLPYWDANGVYHCLTVLHVDNNHVIQVKRLPDNASPLKGLSEWSVQIGAGFMRPYQAKKPHRYHCAYAGCDVKEKLAEFRVAPAAAACVQPGTPITVRHFVPGQYLDVTGTSLGKGFQGVMKRHGFSGLPASHGVSLTHRSLGATGQRQDPGRVFKGKRMPGRMGGRRTTVQNLRLERIDCSRNLLFVSGPVPGHAGNWVLVRDAVK 314
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A7V5M3N0_9BACT (50S ribosomal protein L3 n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5M3N0_9BACT) HSP 1 Score: 228 bits (580), Expect = 7.590e-70 Identity = 132/263 (50.19%), Postives = 159/263 (60.46%), Query Frame = 0
Query: 11 RIGRSLCTSLSDAQ---------------PTRTLP--GFSGEF-RPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVA--PPNPNDHR--QRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFK--LDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKK 249
R+ R+LCT A P T P G F R GV+ARK+GM+ WDA G +TVL +D HVI V P N ++ + W +Q+GAG RPY+ KK HRYHCA AG + K KL EF V ++ GT I A HF GQ +DV GTSIGKG QG MKR GF G PA+HG S THR G+ G PGRVFKGK+M GRMG ER TV +L + R+DC RNL++V G VPG++GNWV VRDAVKK
Sbjct: 14 RLVRTLCTQAETAARSSGPHVPPLRLLLPPPNTEPVAELYGRFVRRIGVVARKIGMLPHWDANGVYRCVTVLHIDNNHVIQVKQLPSNASNLKGLSEWSVQIGAGSMRPYQAKKPHRYHCAYAGTDVKEKLVEFRVAPAAAACIEPGTPITARHFIPGQYLDVIGTSIGKGFQGAMKRHGFGGLPASHGVSLTHRSLGATGQRQDPGRVFKGKRMPGRMGGERTTVQSLRLERIDCKRNLLFVSGPVPGHTGNWVLVRDAVKK 276
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A2P6TTY5_CHLSO (50S ribosomal L3-chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TTY5_CHLSO) HSP 1 Score: 221 bits (564), Expect = 1.940e-67 Identity = 125/226 (55.31%), Postives = 148/226 (65.49%), Query Frame = 0
Query: 34 GEFRPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWR-IQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLRRNEQAPP 258
G R G++A KVGM WDA G R P+TVL VD C V+ V D R+ + +Q+GAG KRP + + + R H AGV K K+ EF V L VG E+RA+HF GQ VDV GTSIGKG QGVMKRWGF+G PA+HG S HR GS G PG+VFKGKKM GRMG ERVTV N V+RVD RNL+YV+G VPG+ GNWV V+D+VKK Q PP
Sbjct: 81 GSTRRTGLVAVKVGMTQEWDAWGVRVPLTVLWVDDCQVVQVK----TDEREGYTALQLGAGAKRPKQLRGSLRGHFEAAGVPLKRKVAEFRVTPDALLPVGHELRASHFVAGQFVDVAGTSIGKGFQGVMKRWGFAGQPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNCKVFRVDPVRNLLYVQGQVPGHKGNWVLVKDSVKKSAA--QQPP 300
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A2P6VDP6_9CHLO (50S ribosomal L3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDP6_9CHLO) HSP 1 Score: 221 bits (563), Expect = 3.270e-67 Identity = 123/222 (55.41%), Postives = 143/222 (64.41%), Query Frame = 0
Query: 37 RPCGVLARKVGMMSLWDAEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLRRNEQAPP 258
R G+LA KVGM WDA G R P+TVL VD C V+ V + +Q+G+G KRP + H A AGV PK L EF V L VG E+RA+HF GQ VDV+GTSIGKG QGVMKRWGF+G PA+HG S HR GS G PG+VFKGKKM GRMG ERVTV N V+RVD RNL+YVRG VPG+ GNWV ++D+VKK Q PP
Sbjct: 89 RRTGLLAVKVGMTQEWDAWGMRQPLTVLWVDDCQVVQVKTAEKEGYTA---VQLGSGAKRPKQLPGTLIGHYAAAGVPPKRMLAEFRVSPDALLPVGHELRASHFIAGQYVDVSGTSIGKGFQGVMKRWGFAGQPASHGNSLAHRAAGSTGGCQDPGKVFKGKKMPGRMGGERVTVQNCQVFRVDPARNLLYVRGQVPGHKGNWVLIKDSVKKTVA--QQPP 305
BLAST of Gcaud2194.t1 vs. uniprot
Match: A0A5J4YUR3_PORPP (50S ribosomal protein L3, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUR3_PORPP) HSP 1 Score: 220 bits (561), Expect = 2.670e-66 Identity = 120/250 (48.00%), Postives = 159/250 (63.60%), Query Frame = 0
Query: 7 AQWRRIGRSLCTSLSDAQPTRTLPG----FSGEFRPCGVLARKVGMMSLWD-AEGTRHPITVLCVDRCHVISVAPPNPNDHRQRWRIQVGAGPKRPYKTKKAHRYHCAKAGVEPKHKLTEFGVHEMFKLDVGTEIRANHFSVGQLVDVTGTSIGKGTQGVMKRWGFSGAPATHGTSKTHRKGGSIGMSTKPGRVFKGKKMAGRMGNERVTVHNLMVYRVDCNRNLIYVRGAVPGNSGNWVRVRDAVKKLR 251
++W +GR + LP ++ + R CGVL RK GMMS+ D A G +TV+ V+RCHV+ + +RW +Q+GAG +RP+ TKK R+HCAKAGVE K KL EF V + + VGT I A HF VGQ VDV GTS GKG QGV+KRWGFSG PATHG SKTHR GSIG + G+V KG KMAGRMG + + V L + RVD +++++++G +PG +G WVR+ D+ K +
Sbjct: 29 SKWAFVGRIQDATQPPPPGMTVLPNELYPYTRQTRRCGVLGRKAGMMSMIDEATGYHFGVTVVLVERCHVLMHIDHRAQNTTKRWNMQIGAGFRRPHLTKKPLRFHCAKAGVETKEKLIEFTVSDDALVPVGTRIGAEHFVVGQKVDVLGTSKGKGFQGVVKRWGFSGQPATHG-SKTHRAPGSIGSFGRKGKVAKGTKMAGRMGGDSIGVFGLKIVRVDPKKSVLFIKGCIPGPNGGWVRITDSAKNYK 277 The following BLAST results are available for this feature:
BLAST of Gcaud2194.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2194.t1 ID=Gcaud2194.t1|Name=Gcaud2194.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=283bpback to top |