Gcaud2193.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2193.t1
Unique NameGcaud2193.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length205
Homology
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A2V3J316_9FLOR (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J316_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 5.520e-83
Identity = 120/196 (61.22%), Postives = 150/196 (76.53%), Query Frame = 0
Query:    5 AWVV-PCARKEPFLLVGGTSFLPNALCLRAPTYKQLLSRKTAVIRSTLHQHSEKALPTEPWKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYKN 199
            AW+V P   K+    +  T FL  ++ L + + +++  R    ++ TL +  +  LP   W GE I+ + LI NV+FN+AGLVPAIAQQWD+ E+LMMAWMN +SI  T+RGGRAVYYSRSR++LWRKGDTSGQIQ +RDV+LDCDGDTILLKVDQ GVACHTGRRSCFYKAFRPP G+EE+IA+V MDP ELYK+
Sbjct:    5 AWLVAPYIAKQSTTSIEHTRFLSKSISLPSSSTRRVSGRSEFAVKMTLREPKQSKLPANTWVGEHIEPENLIRNVRFNDAGLVPAIAQQWDTSEVLMMAWMNEESIRATMRGGRAVYYSRSRKELWRKGDTSGQIQVLRDVLLDCDGDTILLKVDQLGVACHTGRRSCFYKAFRPPKGDEEIIAEVSMDPRELYKS 200          
BLAST of Gcaud2193.t1 vs. uniprot
Match: R7Q4S3_CHOCR (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4S3_CHOCR)

HSP 1 Score: 231 bits (589), Expect = 1.330e-73
Identity = 107/151 (70.86%), Postives = 127/151 (84.11%), Query Frame = 0
Query:   50 TLHQHSEKALPTEPWKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYKNE 200
            T  Q S   +P   W+GE +    L+S VKFN+AGLVPAIAQQWD+GE+L+MAWM+A+SI ET+RGGRAVYYSRSR++LWRKGDTSGQIQ +RD++LDCDGDT+LLKVDQ GVACHTGRRSCFY AFRPP GE  +IADV+MDP ELYK +
Sbjct:   91 TPKQQSMAEIPVT-WRGEGMQTDSLVSQVKFNDAGLVPAIAQQWDTGEVLLMAWMSAESIRETMRGGRAVYYSRSRKELWRKGDTSGQIQVLRDILLDCDGDTVLLKVDQLGVACHTGRRSCFYTAFRPPSGETTIIADVIMDPKELYKKD 240          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A7S2ZKD9_9RHOD (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKD9_9RHOD)

HSP 1 Score: 180 bits (457), Expect = 1.110e-54
Identity = 88/134 (65.67%), Postives = 106/134 (79.10%), Query Frame = 0
Query:   64 WKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELY 197
            W   ++D   ++  VKFN  GLVPAIAQQ+DSGE+LMMAWM+A+SI ETL+  RAVYYSRSR++LWRKGDTSGQ Q V D  +DCDGDTILL VDQ GVACHTGRRSCFY A R  +G EE++  V++DP +LY
Sbjct:   30 WNLAKLDVDAILKEVKFNADGLVPAIAQQFDSGEVLMMAWMSAESIVETLKSNRAVYYSRSRKELWRKGDTSGQHQHVHDFQVDCDGDTILLTVDQLGVACHTGRRSCFYFAVRD-NGLEEILP-VVIDPKKLY 161          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A2E4XXQ6_9PROT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XXQ6_9PROT)

HSP 1 Score: 177 bits (450), Expect = 4.470e-54
Identity = 82/125 (65.60%), Postives = 106/125 (84.80%), Query Frame = 0
Query:   74 LISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYK 198
            +IS++KF++ GLVPAIAQQ+DSGE+LMMAWMNA+S++ETL  GR  Y+SRSRQ LWRKG+TSGQ Q ++++++DCDGDT+LLKVDQ GVACHTGRRSCF+ A R   G    IA+ ++DP+ELYK
Sbjct:    6 VISSIKFDDRGLVPAIAQQFDSGEVLMMAWMNAESVSETLDTGRVCYWSRSRQSLWRKGETSGQTQSLKEMIVDCDGDTLLLKVDQIGVACHTGRRSCFFSAVRD--GSLITIAEQIVDPSELYK 128          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A7S0BF99_9RHOD (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BF99_9RHOD)

HSP 1 Score: 178 bits (451), Expect = 9.030e-54
Identity = 86/134 (64.18%), Postives = 105/134 (78.36%), Query Frame = 0
Query:   64 WKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELY 197
            W   ++D   ++  VKFN  GLVPAIAQQ+DSGE+LMMAWM+ +SI ETL+  RAV++SRSR++LWRKGDTSGQ Q V D  LDCDGDT+LL VDQ GVACHTGRRSCFY A R   G EE++  V++DP+ELY
Sbjct:   30 WNVAKLDVDSILKEVKFNSDGLVPAIAQQFDSGEVLMMAWMSTESIVETLKSRRAVFFSRSRKKLWRKGDTSGQYQHVHDFKLDCDGDTVLLTVDQLGVACHTGRRSCFYLAVRDD-GLEEILP-VVIDPDELY 161          
BLAST of Gcaud2193.t1 vs. uniprot
Match: HIS3_MAGSA (Phosphoribosyl-AMP cyclohydrolase n=6 Tax=Magnetospirillum TaxID=13134 RepID=HIS3_MAGSA)

HSP 1 Score: 172 bits (437), Expect = 4.620e-52
Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 0
Query:   69 IDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYK 198
            ID+  +++ +KFN  GLVPAIAQQ D+GE+LMMAWMNA+S+AETL  GR  Y+SRSR  LWRKG+TSGQ Q ++D ++DCDGDTILLKVDQ GVACHTGRR+CFY A RP  G  EV A V + P+ELYK
Sbjct:    4 IDSAAVLAKIKFNADGLVPAIAQQHDTGEVLMMAWMNAESVAETLATGRVCYFSRSRGGLWRKGETSGQQQRLKDFLIDCDGDTILLKVDQDGVACHTGRRTCFYTAARP-EGLTEV-AKVQVSPDELYK 131          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A7C1USC0_9GAMM (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1USC0_9GAMM)

HSP 1 Score: 172 bits (437), Expect = 6.150e-52
Identity = 85/135 (62.96%), Postives = 106/135 (78.52%), Query Frame = 0
Query:   65 KGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEE-EVIADVLMDPNELYK 198
            KGE +    ++  + FN+ GL+PAIAQQ DSGE+LMMAWMN +S+AETL  GR  Y+SRSRQ+LWRKG++SGQ+Q ++D+ LDCDGDTILL VDQ G ACHTGRRSCF+ A R   GE  EVI+D L+DP +LYK
Sbjct:   10 KGEGLPWADVVDTLPFNQDGLLPAIAQQHDSGEVLMMAWMNRESLAETLETGRVCYWSRSRQKLWRKGESSGQVQRLKDLRLDCDGDTILLLVDQTGPACHTGRRSCFFNAVR---GERVEVISDPLIDPKDLYK 141          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A3B1AWD3_9ZZZZ (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1AWD3_9ZZZZ)

HSP 1 Score: 171 bits (434), Expect = 1.750e-51
Identity = 83/134 (61.94%), Postives = 105/134 (78.36%), Query Frame = 0
Query:   65 KGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYK 198
            KGE +    ++ ++ FN+ GL+PAIAQQ DSGE+LMMAWMN +S+AETL  GR  ++SRSRQ+LWRKG++SGQ+Q +RD+ LDCDGDTIL+ VDQ G ACH+GRRSCFY A R   G  EVI + L+DP ELYK
Sbjct:   10 KGESLPWADVVDSLPFNQDGLLPAIAQQHDSGEVLMMAWMNRESLAETLETGRVCFWSRSRQKLWRKGESSGQVQILRDMRLDCDGDTILMLVDQTGPACHSGRRSCFYNAVRK--GRVEVIDEPLIDPKELYK 141          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A239DV61_9PROT (Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239DV61_9PROT)

HSP 1 Score: 169 bits (428), Expect = 1.670e-50
Identity = 89/138 (64.49%), Postives = 102/138 (73.91%), Query Frame = 0
Query:   63 PWKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFY---KAFRPPHGEEEVIADVLMDPNELY 197
            P     IDA  +++ V+F   GLVPAIAQQ DSGE+LMMAWMNAD+I ETLR GRA Y+SRSRQ  WRKGDTSGQ+Q +  + +DCDGDT+LL VDQ GVACHTGRRSCFY   +A  P     E IA VLMDPN LY
Sbjct:    7 PLPDSAIDA--VLAKVRFTAEGLVPAIAQQHDSGEVLMMAWMNADTIRETLRSGRACYWSRSRQAFWRKGDTSGQVQNLVALRVDCDGDTLLLLVDQLGVACHTGRRSCFYIEAQATGP-----ETIAPVLMDPNALY 137          
BLAST of Gcaud2193.t1 vs. uniprot
Match: A0A7S1EQ94_9RHOD (Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ94_9RHOD)

HSP 1 Score: 171 bits (434), Expect = 1.700e-50
Identity = 78/135 (57.78%), Postives = 102/135 (75.56%), Query Frame = 0
Query:   64 WKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILMMAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDGDTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYK 198
            WK + +D ++++  + FN+ GL+ A+AQQ+++GE+LM AWMNAD++ ETL+ GR  YYSRSRQ LWRKG++SGQIQ + D   DCD D +LL+V+Q GVACHTGRR+CFY A R       V  DVLMDPNELYK
Sbjct:   82 WKHKDVDVEVILEKLNFNKDGLIAAMAQQYNTGEVLMQAWMNADAVRETLKTGRVCYYSRSRQALWRKGESSGQIQSLVDFTFDCDADAVLLQVNQLGVACHTGRRTCFYNAVRSDG--IHVTHDVLMDPNELYK 214          
The following BLAST results are available for this feature:
BLAST of Gcaud2193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J316_9FLOR5.520e-8361.22Histidine biosynthesis bifunctional protein HisIE ... [more]
R7Q4S3_CHOCR1.330e-7370.86Histidine biosynthesis bifunctional protein HisIE ... [more]
A0A7S2ZKD9_9RHOD1.110e-5465.67Histidine biosynthesis bifunctional protein HisIE ... [more]
A0A2E4XXQ6_9PROT4.470e-5465.60Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospi... [more]
A0A7S0BF99_9RHOD9.030e-5464.18Histidine biosynthesis bifunctional protein HisIE ... [more]
HIS3_MAGSA4.620e-5266.15Phosphoribosyl-AMP cyclohydrolase n=6 Tax=Magnetos... [more]
A0A7C1USC0_9GAMM6.150e-5262.96Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sediment... [more]
A0A3B1AWD3_9ZZZZ1.750e-5161.94Histidine biosynthesis bifunctional protein HisIE ... [more]
A0A239DV61_9PROT1.670e-5064.49Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Azospiri... [more]
A0A7S1EQ94_9RHOD1.700e-5057.78Histidine biosynthesis bifunctional protein HisIE ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002496Phosphoribosyl-AMP cyclohydrolase domainPFAMPF01502PRA-CHcoord: 100..173
e-value: 8.0E-33
score: 112.1
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilyGENE3D3.10.20.810coord: 67..164
e-value: 8.7E-38
score: 130.0
IPR038019Phosphoribosyl-AMP cyclohydrolase domain superfamilySUPERFAMILY141734HisI-likecoord: 73..179
NoneNo IPR availablePANTHERPTHR42945:SF4HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN HISIEcoord: 79..188
NoneNo IPR availablePANTHERPTHR42945HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEINcoord: 79..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..204
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
IPR026660Phosphoribosyl-AMP cyclohydrolaseHAMAPMF_01021HisIcoord: 74..177
score: 30.848774

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:36439..37053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2193.t1Gcaud2193.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 36439..37053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2193.t1 ID=Gcaud2193.t1|Name=Gcaud2193.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=205bp
MKRLAWVVPCARKEPFLLVGGTSFLPNALCLRAPTYKQLLSRKTAVIRST
LHQHSEKALPTEPWKGERIDAQILISNVKFNEAGLVPAIAQQWDSGEILM
MAWMNADSIAETLRGGRAVYYSRSRQQLWRKGDTSGQIQEVRDVVLDCDG
DTILLKVDQFGVACHTGRRSCFYKAFRPPHGEEEVIADVLMDPNELYKNE
KQKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002496PRib_AMP_CycHydrolase_dom
IPR038019PRib_AMP_CycHydrolase_sf
IPR026660PRA-CH