Gcaud2188.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2188.t1
Unique NameGcaud2188.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length191
Homology
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BLAST of Gcaud2188.t1 vs. uniprot
Match: A0A2V3J356_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J356_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 4.780e-56
Identity = 140/203 (68.97%), Postives = 158/203 (77.83%), Query Frame = 0 
Query:    1 MINLRSFEEESKTQAEREYDDTYGPLHDLPDSNSDPKQRAIQKKRRKVRSAIVSRRKSALYEKKLEDELHLRTKVNDQLKDKLKNCSVTLAGLQQKINILQNNVP-PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYISSQPT---YHHVGKP--------LPSISSLHLPQS-LPPAKYLGLPRFHEPRETSQVTFSTNHSP 190
            MINLRSFEEESK QAE+EYDDTY PLH+LPDS +DPKQRA+ KKRRKVRSAIVSRRKSALYEKKLE EL LRTKVNDQLK ++KN S+ LA +Q+K+NIL N++   T  XXXXXXXXXXXXXXXXXXXXXXXXXX  ++ P    Y     P        LPS +S+  PQ+ LP  K LGLP FHEPR+TSQVT STNHSP
Sbjct:   32 MINLRSFEEESKLQAEKEYDDTYSPLHNLPDSITDPKQRAVLKKRRKVRSAIVSRRKSALYEKKLEAELELRTKVNDQLKGRVKNFSIALADIQRKVNILHNSMSITTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLPAISPYPFAPPPSAAPPLPSLPSFTSIQAPQAPLPSPKRLGLPPFHEPRDTSQVTLSTNHSP 234
The following BLAST results are available for this feature:
BLAST of Gcaud2188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J356_9FLOR4.780e-5668.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:25928..26500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2188.t1Gcaud2188.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 25928..26500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2188.t1 ID=Gcaud2188.t1|Name=Gcaud2188.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=191bp
MINLRSFEEESKTQAEREYDDTYGPLHDLPDSNSDPKQRAIQKKRRKVRS
AIVSRRKSALYEKKLEDELHLRTKVNDQLKDKLKNCSVTLAGLQQKINIL
QNNVPPTSTSAPTTITTTTSNPAINTTTTSLPPPPYISSQPTYHHVGKPL
PSISSLHLPQSLPPAKYLGLPRFHEPRETSQVTFSTNHSP*
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