Gcaud2181.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2181.t1
Unique NameGcaud2181.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length624
Homology
BLAST of Gcaud2181.t1 vs. uniprot
Match: A0A2V3IYT9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYT9_9FLOR)

HSP 1 Score: 803 bits (2075), Expect = 1.010e-286
Identity = 397/608 (65.30%), Postives = 487/608 (80.10%), Query Frame = 0
Query:    1 MAENGEINPAVKNARVLRCARELLANRTLYISERYKTSLITASSALQSIRMIDNLHDKMEKKMAKTEDVSQMQIELAQARVSLMNAVRSYDKDHIREVECKTERLTLSYDPVYLETEEDRRNRYHDQKNRENRQKVTWTNNPSSRFVSLMKGDFEGVEVVTEAEQRSCVSKCAWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNLTQE-YAGKALFGLRSYTNSETGETIAYPQTRELVYEPSLLGNSEYCSQRMQYISKSNILKALHEETEPTRTCYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNPSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPSTDYILNNGFDHLKGDTSALAAAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRLSNDENFLETQTEVFNPFEEQVSNRAMVLDTVR-NAKSGNIREQVIGVNLFVLDSGKDRAPRPHDLVGALRENHRDVLLLTREDDDKQPKHVRKMIAGPLKQFVSLGRFARFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGPARMYLR 606
            M +NGEI+P+V++ ++LR  RE + NRTL ISER+K SLI AS+A+ SIRM++NL   +EKK A  EDV++++ +L   + SL  AV  YD   I +VE   E+LTLSYDP+YLETEE R+  Y DQK RE RQKVTW  NPSSRFVSLMKGDFEG E VTEAEQRSC+SKCAWLFAIIGL+VAL FLVAEFWYAQ NPAV++T IRN +L++P+IHLCSQFPF+P FDNL+++ YAG+ LFGLRSYTN ET + + YP+T++L+ EPSLLGN EYC   MQY+SK  I+KAL  E + T TCY CL VG KKPI LNA  A  R+LGAVT E+AISYD+EYCFNPS  +SGWLRANLRSSIE HW  L+++ +I +I+ P +D++L  GFDHL+ D  A AAA+ AVYCNIYFFSG+FFPVEP TEVRYG+D    DPWVRLS+D+NFL T T V NP+ ++ +NR  VLD ++ NAK+ +   Q IGVNLFVL+SG DR P  HD V ALR+NHRDVLLLT+E++ K+ K++R+M+AGP+K FVS+GRFARFNVSVDF TFDTAL++RRPTTS+ EFLTDVFEY+GLFTGICAY+LIVGPARMYLR
Sbjct:    1 MNDNGEISPSVQHVKMLRITREEIRNRTLTISERFKESLIVASNAVNSIRMVENLASLLEKKRAHNEDVNRLERQLHNVQNSLKEAVSRYDYTAILDVEGVIEQLTLSYDPIYLETEEIRKKEYRDQKKREARQKVTWAQNPSSRFVSLMKGDFEGAEAVTEAEQRSCISKCAWLFAIIGLLVALSFLVAEFWYAQVNPAVSTTFIRNNRLQVPMIHLCSQFPFIPSFDNLSKDHYAGETLFGLRSYTNIETEDRVLYPETKDLISEPSLLGNQEYCRTHMQYMSKRRIIKALLGELDYTETCYPCLSVGLKKPIHLNAATANQRSLGAVTVEAAISYDIEYCFNPSKAVSGWLRANLRSSIETHWTQLVKQGIIKLINPPDSDFVLKYGFDHLRRDPFARAAAENAVYCNIYFFSGYFFPVEPGTEVRYGYDAREEDPWVRLSDDDNFLATPTNVRNPYVQEETNRTAVLDAIKSNAKASSGLSQYIGVNLFVLNSGSDRPPTLHDYVTALRQNHRDVLLLTKENEHKKNKYIRRMLAGPMKLFVSIGRFARFNVSVDFATFDTALMTRRPTTSVPEFLTDVFEYIGLFTGICAYSLIVGPARMYLR 608          
BLAST of Gcaud2181.t1 vs. uniprot
Match: R7QCX8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX8_CHOCR)

HSP 1 Score: 448 bits (1152), Expect = 1.120e-147
Identity = 234/562 (41.64%), Postives = 345/562 (61.39%), Query Frame = 0
Query:   51 MIDNLHDKMEKKMAKTEDVSQMQIELAQARVSLMNAVRSYDKDHIREVECKTERLTLSYDPVYLETEEDRRNRYHDQKNRENRQKVTWTNNPSSRFVSLMKGDFEGVEVVTEAEQRSCVSKCAWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNLTQE-YAGKALFGLRSYTNSETGETIAYPQTRELVYEPSLLGNSEYCSQRMQYISKSNILKALHEETEPTRTCYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNPSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPSTDYILNNGFDHLKGDTSALA----AAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSR-TDPWVRLSNDENFLETQTEVFNPFEEQVSNRAMVLDTVRNAKSGNIREQVIGVNLFVLDSGKDRAPRPHDLVGALRENHRDVLLLTREDDDKQPKHVRKMIAGPLKQFVSLGRFARFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGPARMYLR 606
            M++NL   +  K  + E+   ++ ++ +A      A+  YD + I +V  + E+LTLS+DP YLE EE R+N + ++K +   ++ TW N+PSSRFVSLMKGD EG+E VTE EQRSC+SKCAW FAI+G+VVA+ FL+A+FW AQ +PA+++ ++RN+ L +PVI+ C   P +P+F++L  E Y G +L+GLRSY N E+GE + +P T  +  EPS LGN ++C    + +S   +  AL  E +P++ C+SCLR+G+K P  LN E A  R  GA+T E A S  +E CFNPS   +  ++  LR  ++   E L ++K++ +I APS  + LN GFD  K   + L       + +V CN+YFFSG FFPVE   E +Y +D +   + W  + N  NF  + ++     +  VS  A++    +  +         G+ +F +D          D V +LR NHRD L  T++ D     +      G  K F ++G   R+N+S+D+ TFDT +++RRP TS AEFLTDVFEYVGLFTGICAY+++VGPARMYL+
Sbjct:    1 MLENLKIVLTGKKERGEETEVIERQVEEADALFREAIHEYDDEKIFDVAGRVEQLTLSHDPFYLEGEEVRKNEFFEKKRKAGVRRATWANSPSSRFVSLMKGDLEGIEEVTEEEQRSCISKCAWGFAILGMVVAISFLIADFWSAQVSPAISTNLVRNDDLVLPVIYACLSLPNIPIFEDLPNERYKGSSLWGLRSYENLESGENMMFPDTNSIA-EPSFLGNLDHCPNVSRKLSAEALKDALGFEPDPSKRCHSCLRIGRKVPFRLNREAASVRPRGAITLEFASSRLLELCFNPSQGSNEVVKNGLRDVLKAQGEDLEKKKIVEIIAAPSLSFALNYGFDDFKNGNTELRNDGLQKELSVLCNLYFFSGHFFPVESGKETKYIYDLNGGVNSWKEVGNTSNFFRSVSDTTLVSDIDVSREAILKSMTQENREEAFVIADAGIEVFKVDDPSRPPGAYKDFVRSLRRNHRDTLSFTKKIDSGVSTYATSFHYGEQKIFKAVGLHRRYNISLDYKTFDTEVITRRPATSTAEFLTDVFEYVGLFTGICAYSVLVGPARMYLK 561          
BLAST of Gcaud2181.t1 vs. uniprot
Match: A0A2V3J668_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J668_9FLOR)

HSP 1 Score: 145 bits (367), Expect = 2.380e-33
Identity = 151/621 (24.32%), Postives = 256/621 (41.22%), Query Frame = 0
Query:   34 RYKTSLITASSALQSIR----MIDNLHDKMEKKMAKTEDVSQMQIELAQARVSLMNAV-------RSYDKDHIREVECKTERLTLSYDPVYLETEEDRRNRYHDQKNRENRQKVTWTNNPSS------RFVSLMKGDFEGVEVVTEAEQRSCVSKC-------AWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNL-TQEYAGKALFGLRSY-----TNSETGETIAYPQTRELVYEPSLLGNSEYCS---------------QRMQYISKSNILKALHEETEPTRTCYSCLRVGQKKPIFLNAEQAKYRTLG--AVTFESAISYDMEYCFNPSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPSTDYILNNGFDHLKGDTSALAAAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRLSNDENFLE-----TQTEVFNPFEEQVSNRAMVLDTVRNAKSGNIREQVIGVNLFVLDSGKDRAPRPHDLVGALRENHRDVLLLTR-EDDDKQPKHVRKMIAGPLKQFVSLGRFARFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGPA 601
            R +   +  ++ LQ  R    +++ L    E+K+ + EDVS +   L+++R  L + +       + YD D  +    K +R   + DP+ L  + D      D  +   R     T++ +S        +S++K + +  +   + E +    K        AW+FA+ G++V +GFL A+FWYAQ N A+     +   LE+PV+ LC+    +P F +  T EY G  LFG++ +     ++S     + YP T     +   L    + S               +R     +SN    +  +T  T +C  C+R+G KK I L   Q +   L   AV  +   +     C    +     + A   + I+ +    L+++ I   D      I  N F                  CN+YFFSGFF+P     ++ Y +    T+ WV+  +   F          ++  P  + +      LD++         E   G+N       +  A  P   + A+      +    R  +  K    +R+  +    Q         +++  DF TF+T  +   PT +  EF+TDVFE+VGLFTGIC +TLIV PA
Sbjct:   19 RAEKEYLNHNAELQGFRKVLAVLNKLGKTREEKLRRGEDVSYLDALLSESRKRLSSLLSNPPAHGKGYDIDFYKWA-AKIQRDVRAQDPLMLSFDSD------DGADGMKRSSTRVTDDSTSVSSKGGALLSILKSNGKLPQKFGDPESKGARDKRLFYLTTGAWIFAVFGMMVTIGFLAADFWYAQKNVAIQIESSKPRPLELPVVTLCNFISNVPHFSHFPTDEYPGLPLFGIQRFALYNRSSSSVSTDLIYPDTLPNSVDSDSLFEDVFVSWDISQCKKVDEGFDVEREMNTLRSNYDLGISGDTGST-SCQHCIRLGYKKRIKLTPPQHREEGLAPPAVNVKVYRTKLFAACQTGLHRRVSIIAALFVAEIQQY-STELKDRGILQFDGEEYRNINMNWFQEDNEQFFDFC-------CNVYFFSGFFYPSSDLADISYEYVPDSTEKWVQTGDGPYFSAFAWKANDHQIPGPSRDALEKDYFTLDSIEI-----FAEDADGIN-------RTAAISPRTKISAISAAQTALYKFKRVTNQGKNEYEIRRSTSN--SQGYQSTTIDVYDLHFDFDTFETKTILTTPTMTWPEFITDVFEFVGLFTGICIFTLIVAPA 609          
BLAST of Gcaud2181.t1 vs. uniprot
Match: R7QDA1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA1_CHOCR)

HSP 1 Score: 132 bits (331), Expect = 1.020e-28
Identity = 127/482 (26.35%), Postives = 200/482 (41.49%), Query Frame = 0
Query:  168 CVSKCAWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNL-TQEYAGKALFGLRSY-----TNSETGETIAYPQT-----RELVYEPSLLGNSEYCSQRMQYISKSNILKALHEE---------TEPTRTCYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNPSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPS----TDYILNNGFDHLKGDTSALAAAQAA----------VYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRLSNDENFLETQTEVFNPFEEQVSNRAM-----VLDTVR-------NAKSGNIREQVIGVNLFVLDSGKDRAPRPHDLVGALRENHRDVLLLTREDDDKQPKHVRKMIAGPLKQFVSLGRFA--RFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGPA 601
            C++  AW  A+IG++V +GFL  +F+ AQ N A+         LE+P + +C   P LP F N  T E+ G  LFG+ +Y     T S   + I +P T     +  V E  L  + E  +Q  +       +K+L +          +E     + C RVG+KK   L     +               D    FNPS  ++ + ++ L  +    +  L R+ V+    A       D +   G     G   ++    A            YCN+YFFSGFF+P   +  + Y ++    + W +      +        +P      NRA+      L+++R        A + +I     G+++  + S    + +  ++ G                     K+V +M  G L Q   L       + V++DF TF+T  +   PT S  EFLTDVFE+VGLFTGIC +TLIV PA
Sbjct:  174 CLTTVAWACAVIGMIVTIGFLSKDFYVAQRNIAIQIERSAPSPLELPAVTICGDTPNLPPFSNFPTDEHPGLPLFGITTYIRTNRTQSSFRKEIHFPDTLPDAEKSPVEEVVLAEDGERVNQLRKGFDARREMKSLRDVANTGSFEDLSENKMQAFYCFRVGRKKRELLYPFDPR---------------DGANLFNPSLQVTVF-KSRLLGACRIRF--LQRDMVLYRAFAAELYLFADRLQERGILDFNGHPKSVLNKTAYDLKIVNHPIDFYCNVYFFSGFFYPTLDNASISYRYNPEYPNLWEKTGRGPYYSAYTWNYSDPLLVGPDNRALEKDFYTLNSIRLFAEDPTEANNNSIVSPSTGMSILDMASSSIYSFKKMNVEG---------------------KNVYQMAQG-LSQSSRLHFKVVDHYQVNMDFSTFETERILTLPTMSWPEFLTDVFEFVGLFTGICIFTLIVAPA 615          
BLAST of Gcaud2181.t1 vs. uniprot
Match: A0A2V3J648_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J648_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 2.480e-18
Identity = 106/469 (22.60%), Postives = 191/469 (40.72%), Query Frame = 0
Query:  157 VEVVTEAEQRSCVSKCAWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNLTQ-EYAGKALFGLRSYTNSETGETIAYPQTREL--VYEPSLLGNSEYCSQRMQYISKSNILKALHEETEPTRTCYSCLRVGQ------KKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFN-PSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPSTD----YIL----NNGFDHLKGDTSALAAAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRLS------NDENFLETQTEVFNPFEEQVSNRAMVLDTVRNAKSGNIREQVIGVNLFVLDSGKD-RAPRPHDLVGALRENHRDVLLLTREDDDKQPKHVRKMIAGPLKQFVSLGRFARFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGP 600
            ++ V    ++  V+  AWL ++ GL+++L F+  +F  ++   A T    +  ++++P +H C+    LP F  L   EY G+ L  L     + +  +  YP+T++L  V   S     + C+   Q            +E      C+ C  V +      K+    NA     + L  V+  + +S   +  F  P +V+  +     RS+I  H   L    ++   D   TD    YIL      GF +   DT  L  A   ++CN+Y FSG+F+P      ++Y F+ S    WVR         D N L  +   F       S+  ++ + V   ++    + +  +  +  D   D  A  P D + +LR      L L + +  +    +  ++ G ++    +     + + V    F T +   + + S + F+ D F    LF  +  YT+IV P
Sbjct:  163 LQSVASTREKRLVAVSAWLMSLAGLIISLAFVTKDFLASKEELASTIRYEKTTEIQLPTLHFCTTGTQLPPFAELPNGEYQGQPLVWLDFIKGTSSNVSYIYPETKDLPQVRVESYTSAGDACTALKQMDPAQ-----FEKENTQAPACFHCFTVDRSSLFQFKEATGSNAGSVSNKFLVRVSQHALVSRCRKTQFGLPFDVLDFF-----RSTIAHHAPNLKVAGIVDYGDYNPTDEEHRYILWPSYRRGFKNKSTDTMMLDMAD--MFCNVYMFSGYFYP-STSPGIKYRFN-SEDYTWVRTGAGPYYPQDYNLLVGRNRAFG----SQSHVEVIGNEVLEERAVYPGQHLFVMTNYSADGVNDVLAVVPTDTIASLRLERN--LALGKNESFQSDTVLEDVLGGDIRTMADV-----YVIDVSMQRFLTKVTGEQQSVSWSAFIADFFGLTSLFLDVSVYTVIVSP 606          
BLAST of Gcaud2181.t1 vs. uniprot
Match: A0A1X6NIK2_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIK2_PORUM)

HSP 1 Score: 73.2 bits (178), Expect = 4.740e-10
Identity = 86/358 (24.02%), Postives = 132/358 (36.87%), Query Frame = 0
Query:  170 SKCAWLFAIIGLVVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNL-TQEYAGKALFGLRSYTNSET--GETIAYPQTRELVYEPSLLGNSEYCS-----------QRMQYISKSNILKALHEETE-----PTRT-------------------------CYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNPSNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPST-DYILNNGFDHLKGDTS-------ALAAAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRL--SNDENFLETQTEVFNP------FEEQVSNRA 467
            S  AW  +++GL V LG L   +   ++NP +   V     L +PVI +C+    +P F    T +Y G  LF +R+     T  G    YP + + V E SL      C+            R   +     L  L  + +     P RT                         C +C R G    + LN   A      AV  +   +  +E CF P + +       L   +  H   L+   V+    AP+  D +    +   +  T+       A AA   A  CN++ FSG+F+P     +VRY  D+   +    L    D+ FL  +  V+        F+ Q S RA
Sbjct:    7 SAAAWAASLLGLTVCLGLLGRAYVDGRSNPLLVRDVATVASLPLPVITVCTSLVGIPSFSRFPTPDYPGHPLFTVRAVGGPGTTGGPMAVYPASLDAVEELSLGPPHAACAVSDAVMDAAAVNRFTGVPSGAALDRLDGDVKRLADAPPRTSLYLPGDVPPVALGVPRGASQDAGLCAACFRFGHSPRLVLNGTAAAAGADVAVRLDVVGARVVETCFFPPDFLPTGRLIFLLEQLVVHTPALIERGVLDYNGAPTDLDGVSRYRWVEPQPPTTDDELEVLADAAGYTAFLCNVFLFSGYFYPAAAGADVRYRLDWRGDNFLCNLPGGGDDPFLGCRPPVWRATGAGPYFQPQTSLRA 364          
BLAST of Gcaud2181.t1 vs. uniprot
Match: A0A1X6P2I2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2I2_PORUM)

HSP 1 Score: 68.9 bits (167), Expect = 1.590e-8
Identity = 70/291 (24.05%), Postives = 111/291 (38.14%), Query Frame = 0
Query:  182 VVALGFLVAEFWYAQANPAVTSTVIRNEKLEMPVIHLCSQFPFLPLFDNL-TQEYAGKALFGLRSYTNSETGETIAYPQTREL-VYEPSLLGNSEY------CSQRMQYISKSNILKALH--EETEPTR--------TCYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNP-------SNVISGWLRANLRSSIEDHWEGLLREKVITVIDAPSTDYILNNGF-----------------DHLKGDTSALAAAQAAVYCNIYFFSGFFFPVE-PDTEVRY 429
            +V+   L   +  +QA P V  T+ R   L++PV+ +C  +  +P F    +  Y G  +  +R+++N E G   A+P   +  V E   +G S        CS R+  +S + +  A        P R         C  C+RVG+   + L A      +   V+     S   +YC +        S  +   L A +   I  H   L+    I V    S D+ L   F                 D  +G            +CN+YFFSG+F+P + P   V Y
Sbjct:    5 LVSFVLLSRSYVRSQAAPVVQVTLTREAVLDLPVVIICPDWREVPHFSRQPSAAYPGHPILAVRAFSNWEAGRIYAWPNLLDANVVEMIHVGGSAAAAPFPNCSARLNAMSVARVSAAYDGLNGLTPVRGLDPGADDRCRVCVRVGRSPTVPLTAAALSSGSPTGVSVSLTTSDAFQYCVDGRRRSADVSQTVFSRLLAAMGEKILQHRAALIERGTIRV----SPDFNLTERFSSGDLRWFTYSRDPRDNDEARGSADLNLTGLIGFHCNVYFFSGYFYPSDDPPGSVAY 291          
The following BLAST results are available for this feature:
BLAST of Gcaud2181.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IYT9_9FLOR1.010e-28665.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCX8_CHOCR1.120e-14741.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J668_9FLOR2.380e-3324.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDA1_CHOCR1.020e-2826.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J648_9FLOR2.480e-1822.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NIK2_PORUM4.740e-1024.02Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A1X6P2I2_PORUM1.590e-824.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 584..605
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 606..623
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..583
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 584..606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:3654..5525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2181.t1Gcaud2181.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 3654..5525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2181.t1 ID=Gcaud2181.t1|Name=Gcaud2181.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=624bp
MAENGEINPAVKNARVLRCARELLANRTLYISERYKTSLITASSALQSIR
MIDNLHDKMEKKMAKTEDVSQMQIELAQARVSLMNAVRSYDKDHIREVEC
KTERLTLSYDPVYLETEEDRRNRYHDQKNRENRQKVTWTNNPSSRFVSLM
KGDFEGVEVVTEAEQRSCVSKCAWLFAIIGLVVALGFLVAEFWYAQANPA
VTSTVIRNEKLEMPVIHLCSQFPFLPLFDNLTQEYAGKALFGLRSYTNSE
TGETIAYPQTRELVYEPSLLGNSEYCSQRMQYISKSNILKALHEETEPTR
TCYSCLRVGQKKPIFLNAEQAKYRTLGAVTFESAISYDMEYCFNPSNVIS
GWLRANLRSSIEDHWEGLLREKVITVIDAPSTDYILNNGFDHLKGDTSAL
AAAQAAVYCNIYFFSGFFFPVEPDTEVRYGFDFSRTDPWVRLSNDENFLE
TQTEVFNPFEEQVSNRAMVLDTVRNAKSGNIREQVIGVNLFVLDSGKDRA
PRPHDLVGALRENHRDVLLLTREDDDKQPKHVRKMIAGPLKQFVSLGRFA
RFNVSVDFGTFDTALVSRRPTTSLAEFLTDVFEYVGLFTGICAYTLIVGP
ARMYLRVFKQNKSNLREATSVRP*
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