Gcaud1940.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1940.t1
Unique NameGcaud1940.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length638
Homology
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A2V3IPY8_9FLOR (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY8_9FLOR)

HSP 1 Score: 627 bits (1616), Expect = 1.300e-216
Identity = 327/584 (55.99%), Postives = 421/584 (72.09%), Query Frame = 0
Query:   58 PFAVDEADPNA-QADVEERNANGSIVTVRSSQDSEEPSPSPVIKRRRKNKTLKEPEAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNVPMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNSVSILTPTLQRATTLRLPR-IPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESILSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGVFGISFDGFMGTPNVYEVKGGVPEDWAPTSFTVSGNMIAVAARRRGTAGCASQEMGCSLSMHRGLVKEGQDLKFGPSLGEPVYTSSQSVPFVHCGIVEGNEGYVDTILAYPDKHASSKLSVWAYKEDVNEGVPSWKGQEVVSHSQIQSS--SVADVRAAAGLLLPRFAKISGVPDGSRGVFVTVGDDIIRVFAAGRY 637
            P A+DE  P     + + RN   S+++VRSS  SE+ S SP+IKRRR  + LK    E   G   Q+DGNCCTICLE W+++GPHQVCCMPCGHLFGY CIKEWI G +SR+R CPTCK PARVKDLRYLFGLPSRLE SDV+E+QRLRE+L +EK SHE T++K E+TK+LAK YR +++ LQR  K S+QTFG+E      +    +RL+SV +T G S++VA+DQDA+YLFNERV    +RHRIGRVDIGRP   ++S +  EKRVN IE+CR T RAD RH+++ASTD  V IL   LQ ATT+  PR IPLS  WLS RP+LIA+G+VSGEV +YD+RQT T +Y  +LSR+QG RAVHSL EV    + ++  VLAASP G++G+ FDG++  P V+ +  G+ E  AP+S TVS N+IAVAA+ R     +SQ++G SLS+H+GL K+G D++ G +LG+ +Y + Q+VPF   G+V G + Y  TILAYPDK A  KLS W YK+  N     W  QEV S     +S  SVADVRAA G+ LPR ++I GVP+ +RG+FVTVG+D++RVFAAG+Y
Sbjct:   52 PIALDEIVPVVPHHEPQPRNEETSVISVRSSDGSEDSSQSPLIKRRRVKRDLKTRTVENVNGEDSQDDGNCCTICLERWSNTGPHQVCCMPCGHLFGYKCIKEWILGSNSRRRACPTCKVPARVKDLRYLFGLPSRLEASDVSEVQRLREQLTKEKTSHERTKMKLEETKRLAKTYRAEIKSLQRHKKSSIQTFGNEKPPDNDDCSTAVRLISVYKTLGASVSVALDQDATYLFNERVSPAGTRHRIGRVDIGRPQTALHSPHTIEKRVNSIEICRDTSRADFRHISIASTDCKVYILASNLQHATTISTPRSIPLSSRWLSCRPNLIAVGMVSGEVFIYDVRQTVTALYGCMLSRDQGARAVHSLHEVY---AENTPVVLAASPLGIYGLVFDGYVDRPTVHPIN-GLAESLAPSSLTVSDNIIAVAAKGRSNGLVSSQQLGSSLSVHKGLSKQGPDIRLGDALGDQIYGNLQTVPFAFGGLVRGADDYAGTILAYPDKLAKDKLSAWTYKKGTN-ATGRWTEQEVQSQGDGCNSLDSVADVRAAVGIRLPRHSRIRGVPEKTRGIFVTVGNDVVRVFAAGKY 630          
BLAST of Gcaud1940.t1 vs. uniprot
Match: R7Q3D2_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D2_CHOCR)

HSP 1 Score: 306 bits (785), Expect = 3.050e-92
Identity = 191/523 (36.52%), Postives = 288/523 (55.07%), Query Frame = 0
Query:  119 TSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNIR---LVSVNRTTGGSLAVAVDQDASYLFNERVPGDRS-RHRIGRVDIGRPNVPMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNSVSILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESILSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGVFGISF-DGFMGTPNVYEVKGGVPEDWAPTSFTVSGNMIAVAARRRGTAGCASQEMGCSLSMHRGLV-KEGQDLKFGPSLGEPVYTSSQSVPFVHCGIVEGNEGYVDTILAYPDKHASSKLSVWAYKEDVNEGVPSWKGQEVVSHSQIQSSSVADVRAAAGLLLPRFAKISGVPDGSRGVFVTVGDDIIRVFAAG 635
            + P +D N C ICLE W S+GPHQ+CC+PCGHLFGY+CI++W+ G   R R+CP CKT AR+KDLRY+FG+ +RL  +D +EIQ L++ +++E  SHE T++K ++T+++A     +M++L+++V   V TFG      R  P    R   L++   T G ++AVA D ++  LF ER+ G  +   R+ R+DIGR  +   S+    +RVN I V        HR VAVA     ++IL P L  A  +      LS +WL  +P+ + +G V G+VL YD+R  +     S+     G R VHS+ E  VND      +LA +P G+FG+ + +G    P V +      E  +  S  V   +IAV++RRR        E   S+ ++ GL  +E     F  ++G+P+   SQ++PF   G++ G +G    ++A  D++A  K+ +W     +  G   WK  E+    Q   S  A VRA A   LPR A++  VP G+  +F  V    IR+FAAG
Sbjct:  112 SQPSDDDNLCIICLENWTSAGPHQICCLPCGHLFGYACIRQWL-GRSRRGRQCPNCKTSARIKDLRYIFGVSTRLAATDTSEIQSLQKRIRQETESHEYTKLKLKETRRIADQAIREMKELRKRVPKPVPTFGGT----RGGPAKCTRHPTLLADCNTNGDTVAVAFDNNSGVLFGERMSGSVAVSQRLSRLDIGRCAIAQSSRAVGNRRVNAIAVDTRPSSPSHRSVAVADAGRKLTILAPNLNLAANVDCGSSLLSATWLERKPNCVVVGAVDGKVLTYDVRNLAGGQLSSVQLAFGGARGVHSVRECTVNDD---LVLLAGTPSGLFGVRYSEGLFTAPIVSDFYCADLEGASICSVAVDAGLIAVSSRRR-----VDGEWKSSILLNEGLRWREDGKFTFSATVGKPLQGHSQTLPFEQVGVLGGGDGGQPMVVA-ADRNAKGKVRMWNTNR-LGSG-SQWKTFEI---EQNYDSEGATVRACAAQRLPRRARLDKVPKGTEALFACVTYGSIRLFAAG 615          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A075A668_9TREM (RING-type domain-containing protein n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A075A668_9TREM)

HSP 1 Score: 111 bits (277), Expect = 6.230e-22
Identity = 102/330 (30.91%), Postives = 147/330 (44.55%), Query Frame = 0
Query:  112 EAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISH---ETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNVPMYSQYPTEKRVNCI-----EVCRHTCRADHRHVAVASTDNSV---SILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESILSRNQGFRAVHSLEEVAVNDSH 430
            E  K   T+  ED   C IC EPW S+GPH++CC+ CGHLFG+SC+  WIR    ++  CP C + A VKD+RY++     L V D +E  R   +L  E+ +    E    +Y    +L ++   Q+RD    V+   Q  G               + S+  +  G+  V    D  YL N       S + I R   G   +    Q P  K ++       +V  H    D   ++ AS D ++   S+LT   Q   T + P    SC W S  PH +  G  +G V ++DIR TS  +    LS    F  V  L+ V  +DSH
Sbjct:   38 EQNKTTNTTIGEDSENCPICFEPWTSTGPHKLCCLRCGHLFGHSCVLRWIRS-QGKQGRCPQCNSRACVKDIRYIYT--RNLRVLDTSERDRALADLAIERAARRKAEQDSAEYRAKYQLLQVELNQLRDEFHSVRAISQILGRNPTQTSAYRGQYELMKSILLSNTGNCRVMASCD--YL-NALCVSQPSSNPIFR-GFGIRKINTIDQRPL-KYIHLHGQPIRDVSFHPDAQDGILIS-ASLDKTLRLTSLLTD--QVVQTYQCPSPVWSCCWASPNPHRLFAGCSNGTVQVFDIRVTSGPLIT--LSIPDNFSPVIGLQYVPQSDSH 354          
BLAST of Gcaud1940.t1 vs. uniprot
Match: B9S0F6_RICCO (Protein binding protein, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9S0F6_RICCO)

HSP 1 Score: 109 bits (273), Expect = 2.000e-21
Identity = 101/369 (27.37%), Postives = 165/369 (44.72%), Query Frame = 0
Query:  110 EPEAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRI-KYEDTKKLAKIYREQMRDLQRQVKPSVQTFGH-EHNLQRVEPVDNIRLVSVNRT------TGGSLAVAVDQ-----DASYLFNERVPGD-----RSRHRIGRVDIGRPNV-----------PMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNSVSILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESILSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGVFGISFD 449
            E   +   G   + +G  C IC++ W S G H +CC+PCGHLFG SCI +W++   S K +CP C     +KD+R LF    RL V D        EE Q+  +  +++    Y +  K+   ++++  DLQ ++    Q   + EH L  VE    + LV+ +R+       G  L  A D      D + LF+    G      R   +IG   + + N+           P   +   +  ++        C +  ++++V S +++  IL+          LP    SCSW  +  H I  GL +G +L +DIRQT   +   +   N     +HSL++   N S  +  +L+AS  G+   +FD
Sbjct:   95 EAAGQSSQGNRNEIEGLFCPICMDAWTSEGDHHICCLPCGHLFGLSCISKWLKQNRS-KAKCPQCNRKCTLKDVRKLFA--PRLAVVD--------EESQKVFLFSQSSGFYMYFNWCKMESEWQKREADLQHKINQLTQRTNYLEHLLGDVESRSTV-LVTGSRSYQEHFIPGNLLFQAEDLFFNFLDGARLFDMDALGQILLLARRFPKIGSHVLTKMNLLPPHETEDILLPSNMKIIKDLHISPFNRSHALCASLGKNLSVLSMESNCVILS--------CNLPAPAWSCSWDLNSSHYIYAGLQNGSLLAFDIRQTGREVESRLGLTNNPIHTLHSLQD---NSSSGARRLLSASSVGICQWNFD 440          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A251SEM2_HELAN (Putative transducin/WD40 repeat-like superfamily protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SEM2_HELAN)

HSP 1 Score: 107 bits (267), Expect = 9.280e-21
Identity = 102/359 (28.41%), Postives = 154/359 (42.90%), Query Frame = 0
Query:  124 DGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQ----------------------REKISHETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNI------RLVSVNRTTGGSLAVAVDQDAS---YLFNERVPGDRSRHRIGRVDIGRPN------VPMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNSVSIL-TPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESI-LSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGV 443
            +G CC IC EPW + G HQ+ C+PCGH++G SCIK+WI+   SR  +CP C      KD+R L+    +L V D  E+Q+  + L+                      RE   H       E TK L ++ +++ R+      P     G++  +       N+       L    +  GG      D DAS    +   R  G      + ++ +  PN      +P Y++     R  C+  C        R   VAS    +SI+ T +     T  LP    SCSW    P+ +  GL +G V+ +D RQT   +   I LS N     VH+L  VA + S  ++ +L+AS  G+
Sbjct:   67 EGLCCPICTEPWTTGGLHQISCLPCGHIYGLSCIKKWIQQ-RSRSAKCPQCNKKCTRKDVRVLYA--EQLHVVDA-EVQKQVQSLEAKCASLEQKNAVCCKKEVEAQKREADLHLKVAKLTEKTKYLERLLKDRQRE------PFASNPGYQRRVINGNGSGNVFCPGAFTLQREFQVDGGRY---FDIDASGQLMIVARRQNGTGGTSILSKISLLAPNEREDIHLPAYTK---AVRALCVRPCT-------RLALVASLGKKLSIVSTESNNTVVTYDLPASAWSCSWDVDSPYHVYTGLQNGMVMSFDTRQTKEPLETRIGLSCNP----VHTLISVAPDSSSGTTTLLSASQIGI 398          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A8J4STR2_9TREM (Ring finger and WD repeat domain 3 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4STR2_9TREM)

HSP 1 Score: 106 bits (264), Expect = 2.590e-20
Identity = 92/314 (29.30%), Postives = 145/314 (46.18%), Query Frame = 0
Query:  115 KGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRIKYEDTK---KLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNIRLVSVNRTTG---GSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNV-PMYSQYPTEKRVNCIEVCRHTCRADHRH-----------------VAVASTDNSV---SILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTS 401
            K G  +  ED + C+IC EPW S+GPH++CC+ CGHLFGYSCI +WIR    ++  CP C + A  +D+R+L+     L V D +E  R   +L  E+       ++  + K   +L  +   Q+R+  + V+   Q F     ++  +P D+      +  +G   G   +      S   N RV    S   +  + + +P+  P++  +   K +N +E  +   +  H H                 +  AS D SV   S+LT   Q   T + P    SC W S  PH +  G  +G VL++DIR TS
Sbjct:   39 KTGDVTFGEDSDNCSICFEPWTSTGPHKLCCLRCGHLFGYSCISKWIRS-QGKQGRCPQCNSNAVRRDIRFLYT--KNLRVLDTSERDRALADLAIERTLRRKAELEAAEHKAKYQLLHVELTQLREEFQSVRAVSQAF-----VRHSDPPDSSSQSVDSAPSGARRGQYELVKSLPLSNTGNCRVMA--SCDYLNVLCVSQPSTNPIFRGFGIRK-INTVE--QRPLKYIHLHCQPVRDLAFHSNAQDGLLISASLDKSVRLTSLLTD--QVVQTYQCPSPVWSCCWASPDPHRLFAGCSNGSVLVFDIRFTS 337          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A061F0A3_THECC (Transducin/WD40 repeat-like superfamily protein, putative isoform 1 n=3 Tax=Byttnerioideae TaxID=214909 RepID=A0A061F0A3_THECC)

HSP 1 Score: 106 bits (264), Expect = 2.840e-20
Identity = 106/385 (27.53%), Postives = 160/385 (41.56%), Query Frame = 0
Query:  124 DGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRI--------------------------------KYEDTKKLAKIYREQMRDLQRQV---KPSVQ--------TFGHEHN------LQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNVPMYSQYPTE--------KRVNCIEVCRHTCRADHRHVAVASTDNSVSIL-TPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTSTHMYESILSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGVFGISFDG 450
            +G  C IC+E W ++G H VCC+PCGH++G+SCI +W++      R+CP C     +KD+R LF   SR+   D    +R+R  L+   IS E T                                  +    K+  K Y E + D+Q +     PS++          G E N      LQ+   VD  RL  V+ ++            + L   R+ G    H + ++ +  P       Y TE        K V  +    H C +D     +AS    +S+L T +        LP    SCSW  +R H I  GL +G VL++D+RQT+ HM       +     +HSL    +      +A+L+AS  G+   SF G
Sbjct:  113 EGLFCPICMEAWTTTGDHHVCCLPCGHIYGFSCIHKWLQQ-RGTSRKCPQCNRKCTLKDVRKLFA--SRVVAIDGESQKRIRS-LEANCISLEKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVHQLKEKTK-YLEHLIDVQSRTFGCAPSIRGLQVPLGHNLGSEFNEQGPFILQKELRVDGARLFDVDASS-----------KNLLIARRLQGLGGTHFLTKMSLVAP-------YETEDISLPFGTKAVRDL----HICPSDGSLALLASLGKKLSVLSTESNNVILAYDLPAAAWSCSWDLNRSHQIYAGLQNGSVLVFDMRQTARHMDSMNGLTSNPVHTIHSLHNSTIPSG--ITAILSASSVGICQWSFGG 468          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A564Z8R0_HYMDI (RING-type domain-containing protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564Z8R0_HYMDI)

HSP 1 Score: 105 bits (261), Expect = 5.510e-20
Identity = 84/310 (27.10%), Postives = 136/310 (43.87%), Query Frame = 0
Query:  110 EPEAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRIKYEDTK---KLAKIYREQMRDLQRQVKPSVQTFGHEHNLQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNVPMYSQYPTEK-------RVNCIEVCRHTCRADHRH-------VAVASTDNSVSILTPTLQRATTLRLPRIPL-SCSWLSSRPHLIAIGLVSGEVLMYDIRQTS 401
            EP A K    S  ++ +CC IC E W +SGPH++CC+ CGHLFG SCI +WI     ++  CP C   A VKDLR L+    +++  D T++ R  ++L  E+       ++  + K   +LA    E +RD  R +K  V     E N      V   +   +  +T G+  +      S     RV        +  +     N P++  +  +K       ++  I +     R    H       +A AS D ++ + +  + +         P+ SC W S  P+ +  G  +G V ++DIR TS
Sbjct:   41 EPPANKTNDQSMSDESDCCLICFEQWTTSGPHRICCLKCGHLFGKSCITKWIMSNRPKQGTCPQCNAKATVKDLRILYC--KKIKAIDTTDLDRALQDLDTERKLRRKIELELSECKFKLQLACSDAENLRDELRSLKAVVS--AAEINRPPSGSVPPSKRPKMADSTTGNYDLVKSIIISQAGQCRVMTAYDYINLLCISQSSTN-PLFKGFGIKKVHSEEARQLKYIHLHSQPIRDLAFHPEQQDAIIASASVDKTLKLTSLLVDQVVQTYQCAAPIWSCCWASPSPNYLFAGCGNGSVYLFDIRITS 345          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A5J4NXS1_9TREM (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NXS1_9TREM)

HSP 1 Score: 104 bits (260), Expect = 7.050e-20
Identity = 89/305 (29.18%), Postives = 136/305 (44.59%), Query Frame = 0
Query:  104 KNKTLKEPEAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTEIQRLREELQREKISHETTRIKYEDTK---KLAKIYREQMRDLQRQVKPSVQTFGHEHNL--QRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSRHRIGRVDIGRPNV-PMYSQYPTEKRVNCIEVCRH-TCRADHRHVAVASTDNSVSILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQTS 401
            KN   +  E  K G  +  ED + C IC EPW S+GPH++CC+ CGHLFGYSCI +WIR    ++  CP C + A  +D+R+L+     L V D +E  R   +L  E+       ++  + K   +L  +   Q+R+  + V+   Q F     L   + + VD+      + T  G   +      S   N RV    S   +  + + +P+  P++  +   K        R     A  R     S  +    + P +Q   T + P    SC W S  PH +  G  +G VL +DIR TS
Sbjct:   13 KNLENENKEPLKTGDVTFGEDSDNCPICFEPWTSTGPHKLCCLRCGHLFGYSCISKWIRS-QGKQGRCPQCNSNAVRRDIRFLYT--KNLRVLDTSERDRALADLAIERTLRRKAELEAAEHKAKYQLLHVELTQLREEFQNVRTVSQVFVRHSALPDSKSQSVDS----PPSGTHRGQYELMKSLPLSTTGNCRVMA--SCDYLNVLCVSQPSTNPIFRGFGVRKVTEAFVALRQRNLAAQGRCWTTDSAFSRSYRVAPVVQ---TYQCPSPVWSCCWASPDPHRLFAGCSNGSVLGFDIRFTS 305          
BLAST of Gcaud1940.t1 vs. uniprot
Match: A0A4C1ZYU5_EUMVA (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZYU5_EUMVA)

HSP 1 Score: 103 bits (258), Expect = 1.170e-19
Identity = 93/319 (29.15%), Postives = 147/319 (46.08%), Query Frame = 0
Query:  104 KNKTLKEPEAEKGGGTSP---QEDGNCCTICLEPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPS-RLEVSDVTEIQRLREELQREK----ISHETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQT----FGHEHNLQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSR------HRIGRVDIGRPNVPMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNSVSILTPTLQRATTLRLPR-IPL-SCSWLSSRPHLIAIGLVSGEVLMYDIRQTST 402
            KN   KEP A++    SP   ++DG  C ICL+ W+SSG H++  + CGHLFGY C+++W+R   +  R CPTCK+ A +KD+RY++       + S++T +Q+  E LQ EK    +    ++I Y++   L ++Y  +    +   +  V      F  E N++ +      R+++ N        + V Q +S   N   PG   R      HR+G+     P           K +  I   +      +  +   S D +  IL    + A +L +    PL SC+W         +G V G  L YDIR TST
Sbjct:   76 KNDRCKEPPAKQPRLMSPDLDEQDGETCPICLDSWSSSGDHRLVSLKCGHLFGYRCVEKWLRARKTADRSCPTCKSKAAIKDIRYIYAKKLVACDTSEITTLQKQVEVLQAEKNRLELELHQSKISYKNC--LQQLYALEQASTRNSARAHVFNCNWRFALEKNME-ISKEGGCRVLTYNCKR---YELLVSQKSS---NNLFPGFGVRKVGCIDHRLGQFIHLHP-----------KPIRDISYSQ-----PNDFLLSVSLDGTAKILD---RDAPSLTIQAGFPLWSCTWDEMHTQEFVVGGVGGIALRYDIRNTST 366          
The following BLAST results are available for this feature:
BLAST of Gcaud1940.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPY8_9FLOR1.300e-21655.99E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Gracilar... [more]
R7Q3D2_CHOCR3.050e-9236.52RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A075A668_9TREM6.230e-2230.91RING-type domain-containing protein n=4 Tax=Opisth... [more]
B9S0F6_RICCO2.000e-2127.37Protein binding protein, putative n=2 Tax=Ricinus ... [more]
A0A251SEM2_HELAN9.280e-2128.41Putative transducin/WD40 repeat-like superfamily p... [more]
A0A8J4STR2_9TREM2.590e-2029.30Ring finger and WD repeat domain 3 n=1 Tax=Paragon... [more]
A0A061F0A3_THECC2.840e-2027.53Transducin/WD40 repeat-like superfamily protein, p... [more]
A0A564Z8R0_HYMDI5.510e-2027.10RING-type domain-containing protein n=2 Tax=Hymeno... [more]
A0A5J4NXS1_9TREM7.050e-2029.18E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Paragoni... [more]
A0A4C1ZYU5_EUMVA1.170e-1929.15E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Eumeta v... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..118
NoneNo IPR availableCDDcd16450mRING-C3HGC3_RFWD3coord: 124..175
e-value: 1.91889E-23
score: 91.5689
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 122..180
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 128..174
e-value: 9.9E-5
score: 31.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 127..175
e-value: 4.1E-7
score: 30.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 128..175
score: 12.813844
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 99..240
e-value: 6.3E-13
score: 50.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 309..487
e-value: 2.0E-5
score: 26.1
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 64..463
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 317..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_105_length_50300_cov_4.471768contigNODE_105_length_50300_cov_4.471768:46470..48383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1940.t1Gcaud1940.t1Gracilaria caudata M_176_S67 malemRNANODE_105_length_50300_cov_4.471768 46470..48383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1940.t1 ID=Gcaud1940.t1|Name=Gcaud1940.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=638bp
MPSPIRLPNGSLRPSSSEQVRELPTERRRVEQSAVLNLIVEDFFSTEQVH
IGPAPNPPFAVDEADPNAQADVEERNANGSIVTVRSSQDSEEPSPSPVIK
RRRKNKTLKEPEAEKGGGTSPQEDGNCCTICLEPWASSGPHQVCCMPCGH
LFGYSCIKEWIRGGHSRKRECPTCKTPARVKDLRYLFGLPSRLEVSDVTE
IQRLREELQREKISHETTRIKYEDTKKLAKIYREQMRDLQRQVKPSVQTF
GHEHNLQRVEPVDNIRLVSVNRTTGGSLAVAVDQDASYLFNERVPGDRSR
HRIGRVDIGRPNVPMYSQYPTEKRVNCIEVCRHTCRADHRHVAVASTDNS
VSILTPTLQRATTLRLPRIPLSCSWLSSRPHLIAIGLVSGEVLMYDIRQT
STHMYESILSRNQGFRAVHSLEEVAVNDSHDSSAVLAASPHGVFGISFDG
FMGTPNVYEVKGGVPEDWAPTSFTVSGNMIAVAARRRGTAGCASQEMGCS
LSMHRGLVKEGQDLKFGPSLGEPVYTSSQSVPFVHCGIVEGNEGYVDTIL
AYPDKHASSKLSVWAYKEDVNEGVPSWKGQEVVSHSQIQSSSVADVRAAA
GLLLPRFAKISGVPDGSRGVFVTVGDDIIRVFAAGRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037381RFWD3
IPR036322WD40_repeat_dom_sf