Gcaud2201.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 356 bits (913), Expect = 1.850e-113 Identity = 335/546 (61.36%), Postives = 392/546 (71.79%), Query Frame = 0
Query: 6 LFFFALLGCLTVSLAVPTVIRQDGNAD-TCPLDGVCFALDQSGSIFSNYQILQAFVVAVARDVEANSPQTLFSAFGFSTTVNPIQSSTSEVEGVFVPAVNAPVTPSGTTNMYAGLNACFNELTDLTGNRVIVLLTDGVDNGSPFAIELAPRVRDQGIVIITIGIGSGVSSLYLQQLATSPAFFIASAFTALPIEVFRLSQMMCELPVVSPMP--TDDDFLEPEISVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPADACELAFQECGFTFVGTPTVPTFVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRT 548
L F A L++S+AVPTV+RQD +++ TCP+D VCFA+DQSGSIF NY +Q FV+ VAR++E+ S TLFSA+GFS +V IQ+STS++E +FVPAV A PSG+TNMYAGLN CFN++ D GN+VI+LLTDG DN P A LAP ++D GI I+T+GIG+GVS+ YL+QLA++P FFI F+ LP EV LSQM C+ SP P T ++ +EP ++ T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DACE A+Q+C F F TP VPTF L PD+PFTPRI+S P + +GVLNTN I+PEFIE DG+V IT T A P FAPTQFKP SIP D GS +G+QTFQGNQ + +RCVR+FF+SFQ+L PF VI N+ A DN CVVFRT
Sbjct: 4 LIFLAFSAFLSLSIAVPTVVRQDDSSEETCPIDSVCFAMDQSGSIFLNYGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQLMFSTLPSEVVSLSQMTCDAVDASPEPSETPEETMEPFVTETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFXXXXXXXXXXXXXXLVSESPEPSMTXXXXXXXXXXXXXXXXXXXXXXXXXVIESPIXXXXXXXXXXXVPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTL------------------------DACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITS-TPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRT 524
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 281 bits (720), Expect = 1.430e-86 Identity = 186/548 (33.94%), Postives = 253/548 (46.17%), Query Frame = 0
Query: 7 FFFALLGCLTVSLAVPTVIRQD----GNADTCPLDGVCFALDQSGSIFSN-YQILQAFVVAVARDVEANSPQTLFSAFGFSTTVNPIQSSTSEVEGVFVPAVNAPVTPSGTTNMYAGLNACFNELTDLTGNRVIVLLTDGVDNGSPFAIELAPRVRDQGIVIITIGIGSGVSSLYLQQLATSPAFFIASAFTALPIEVFRLSQMMCELPVVSPMPTDDDFLEPEISVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPADACELAFQECGFTFVGTPTVPTFVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRTA 549
F +LL ++++P I QD ++ C ++ VCF LD+SGSI S+ Y + Q FV++V+R + + + TL+SA+GF+++ + IQ+STS +EG FVP +N G+TNMYAGLNACFNE+ GNRVIVL+TDG DNG+P A LAP V+ G+ I+TIG+GSGV YL+ LAT+PAFFI S F++LP +V R+++ C++ VSP+P +I+ T D CE A+ C F F+ +VPTF + PD PFTP+I+S +P +GVLNTNDIV EFIE DGTV PIT E A F+ TQFKP ++ G + S I H++FQ +Q + DRCVRVF SSFQ+L P VIGN T DN C+VFRT+
Sbjct: 6 FILSLLALFACAVSIPFSIHQDLPTNDTSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVP--------DITPTPIP----------------------------------------------------------------------------------------------------------------------------------------------------------------------DPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEP-AIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTRADNKCMVFRTS 378
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 132 bits (333), Expect = 1.030e-30 Identity = 73/148 (49.32%), Postives = 94/148 (63.51%), Query Frame = 0
Query: 401 CELAFQECGFTFVGTPTVPTFVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRT 548
C AF EC FTF G + TF + PD+ FTPRI+S D S+ +GVLN+N+IVPEFIE +G V PIT+ S F PT FKP+++ GS IGHQTF GNQ V DRC+RV+F+ FQ + + +I + +N CVVFRT
Sbjct: 211 CSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNG-VFPITNF--GSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNK---LINRNDVPRSENKCVVFRT 352
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 129 bits (325), Expect = 2.780e-28 Identity = 73/150 (48.67%), Postives = 92/150 (61.33%), Query Frame = 0
Query: 399 DACELAFQECGFTFVGTPTVPTFVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRT 548
D C+ A+ CGF F VP F + + F+P I S + + N+GVLN+N++ E E DG V IT AS F+ TQFKPFS+ GS IGH+TFQ +Q VI RCVRVFFS FQ+L PF V+GNV A +DN CVVF+T
Sbjct: 453 DKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITS-LPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKT 601
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR) HSP 1 Score: 122 bits (305), Expect = 1.130e-26 Identity = 70/189 (37.04%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 24 VIRQDGNADTCPLDGVCFALDQSGSIFSNYQILQA-FVVAVARDVEANSPQTLFSAFGFSTTVNPIQSSTSEVEGVFVPAVNAPVTPSGTTNMYAGLNACFNELTDLTGNRVIVLLTDGVDNGSPFAIELAPRVRDQGIVIITIGIGSGVSSLYLQQLATSPAFFI-ASAFTALPIEVFRLSQMMCELP 210
++R +CP VCFA+D+SGSI I Q +VA+A+++ +P + SA GFS+ IQS T+++ G FV A+ GTT+ A L C ++ R+IVLLTDG DN PF +A +++ GI+IITIGIGSG+++ L+ +A+SP FI F++ + + +C +P
Sbjct: 64 LLRITSAQRSCPPLNVCFAIDESGSISPTDFIEQTEAIVAIAQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAADPRIIVLLTDGADNTMPFGTSVAGGIKNNGIIIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPVP 252
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR) HSP 1 Score: 110 bits (275), Expect = 8.090e-23 Identity = 65/150 (43.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query: 401 CELAFQECGFTFVGTPTVPT--FVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRT 548
CE A+ +C F F G F + PD+ FTPR++ + ++G LNTN++VPEFIE PIT+ S F PT FKP+ I + GS +GHQTFQGNQ V D+CVRV+F+SFQ + V+ +N CVVFRT
Sbjct: 214 CEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIE-GNQGRPITEF--GSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQ--VVNRNNVPTSENKCVVFRT 358
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IGH1_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR) HSP 1 Score: 105 bits (263), Expect = 3.160e-21 Identity = 61/150 (40.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 401 CELAFQECGFTFVGTPTVPT--FVLPTVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEATVDDNACVVFRT 548
CE A+ +C F F G F + PD+ TP+++ + ++G LNTN++VPEFIE + V IT+ S F PT FKP+ I + GS +GHQTFQGNQ + D+CVR++F+SFQ +S + V+ ++ CVVFRT
Sbjct: 215 CEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIE-ENQVSLITEF--GSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEIS--QNGQVVNRNNVPTSEHKCVVFRT 359
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A2V3IEB5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEB5_9FLOR) HSP 1 Score: 97.4 bits (241), Expect = 6.080e-20 Identity = 64/158 (40.51%), Postives = 89/158 (56.33%), Query Frame = 0
Query: 397 PADACELAFQECGFTFVGTPTVPTFVLP-TVPDQPFTPRIISSDPSINIGVLNTNDIVPEFIEPDGTVVPITDETDASPPFAPTQFKPFSIPGDTGSAIGHQTFQGNQALVIGDRCVRVFFSSFQVLSTVEPFFVIGNVEAT----VDDNACVVFRTA 549
P D C F +C F G + TF L TV + FTP I+ P IG++N+N ++P+FIE + + T+ T PTQFKPF+I T S +GH+TFQG + V RCVRV+F+S Q+L + V+ N + T V +N CVVFRT+
Sbjct: 23 PPDFCVSFFDDCVLRFAGQAALATFPLAATVDNVAFTPAIVF--PGEQIGIVNSNGVIPQFIESKPSGITATNVTAFG--LTPTQFKPFTIVNTTTSGVGHETFQGAVS-VAQRRCVRVYFTSGQIL---QGGVVVDNAQFTPEEAVAENVCVVFRTS 172
BLAST of Gcaud2201.t1 vs. uniprot
Match: A0A7S1XH88_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH88_9RHOD) HSP 1 Score: 76.3 bits (186), Expect = 2.290e-11 Identity = 58/189 (30.69%), Postives = 94/189 (49.74%), Query Frame = 0
Query: 31 ADTCPLDGVCFALDQSGSIFSNYQILQAFVVA-VARDVEANSPQ----TLFSAFGFSTTVNPIQSSTSEVEGVFVPAVNAPVTPSGTTNMYAGLNACFNELTDLTGNRVIVLLTDGVDNGSPFAIELAPRVRD-QGIVIITIGIG-SGVSSLYLQQLATSPAFFIASA-FTALPIEVFRLSQMMCELPV 211
A CP++ +CFA+D+SGSI I + V VA +E+ S T + A GFS++ N + T+ F V++ G T+ L C N + G RVIVL+TDG + A A ++ ++TIG+G + ++ L+ LA+ P FF+ S F+ L + ++ Q +C P+
Sbjct: 20 AQQCPINSICFAIDESGSISGTQFIAENTAVKNVADSIESISISLGISTTYGAVGFSSSANVVSPLTNLA--TFKGNVDSNPKSGGGTSYGPALQQCRNLIGPQAGVRVIVLVTDGQPSDPAAATSEANIIKSLPNTFLVTIGVGLTSTATTLLRDLASGPEFFVGSTDFSTLTTQTGKILQAICPPPI 206
BLAST of Gcaud2201.t1 vs. uniprot
Match: Q7XZ43_GRIJA (Alpha 1 type VII collagen (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ43_GRIJA) HSP 1 Score: 71.2 bits (173), Expect = 1.300e-10 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 0
Query: 34 CPLDGVCFALDQSGSIF-SNYQILQAFVVAVARDVEANSPQTLFSAFGFSTTVNP------IQSSTSEVEGVFVPAVNAPVTPSGTTNMYAGLNACFNELTDLTGNRVIVLLTDGVDNGSPFAIELAPRVRDQGIVIITIGIGSGVSSLYLQQLATS 183
CP +C+A+D+S SI + + L A +V + +P + F+A FS N + TS+V F+ A+ A G T+ GLN C EL +VI+L+TDGVDN +P +++ ++ G + +GIG ++ L+ +S
Sbjct: 25 CPPAKICYAIDESESISGTEFAQLNAALVEITNTFSTAAPGSSFAAVDFSGLQNGGGVGEVVSPLTSDVT-TFLAALAANPKRGGFTSSGTGLNLCDQELDGQAQPKVILLITDGVDNRNPIGVDVEAAIKANGNTVAVVGIGDNLNDDDLRDTISS 180 The following BLAST results are available for this feature:
BLAST of Gcaud2201.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2201.t1 ID=Gcaud2201.t1|Name=Gcaud2201.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=550bpback to top |