Gcaud9335.t2 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGcaud9335.t2
Unique NameGcaud9335.t2
TypemRNA
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length548
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_199_length_38196_cov_4.525364contigNODE_199_length_38196_cov_4.525364:1344..2987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog42254.XP_004617496.1
Preferred nameGAK
PFAMsDnaJ,PTEN_C2,Pkinase
Max annot lvl33208|Metazoa
KEGG koko:K08855
GOsGO:0000003,GO:0001654,GO:0001745,GO:0001889,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006892,GO:0006896,GO:0006897,GO:0006898,GO:0006996,GO:0007029,GO:0007030,GO:0007034,GO:0007041,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0008544,GO:0009653,GO:0009887,GO:0009888,GO:0009913,GO:0009987,GO:0010256,GO:0010721,GO:0010941,GO:0010975,GO:0010977,GO:0012505,GO:0016043,GO:0016191,GO:0016192,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019953,GO:0022008,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0030154,GO:0030332,GO:0030855,GO:0030900,GO:0031344,GO:0031345,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032984,GO:0033036,GO:0033365,GO:0033561,GO:0034067,GO:0034613,GO:0035295,GO:0035622,GO:0036211,GO:0036465,GO:0042127,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043588,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048193,GO:0048232,GO:0048468,GO:0048488,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048592,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048732,GO:0048749,GO:0048853,GO:0048854,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050891,GO:0050896,GO:0051084,GO:0051085,GO:0051087,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051261,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060322,GO:0060429,GO:0060548,GO:0061008,GO:0061009,GO:0061024,GO:0061077,GO:0061436,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071840,GO:0072318,GO:0072319,GO:0072583,GO:0072657,GO:0072659,GO:0090160,GO:0090596,GO:0098657,GO:0098791,GO:0099003,GO:0099504,GO:0120035,GO:0140096,GO:1901214,GO:1901215,GO:1901564,GO:1905224,GO:1990778,GO:2000026,GO:2000177,GO:2000179
Evalue5.22e-46
EggNOG OGsCOG2453@1|root,KOG0431@1|root,KOG1989@1|root,KOG0431@2759|Eukaryota,KOG1989@2759|Eukaryota,KOG2283@2759|Eukaryota,38FPN@33154|Opisthokonta,3BGBU@33208|Metazoa,3CTXK@33213|Bilateria,486GR@7711|Chordata,498ND@7742|Vertebrata,3JE6F@40674|Mammalia
EC2.7.11.1
DescriptionCyclin G associated kinase
COG categoryT
BRITEko00000,ko01000,ko01001,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9335Gcaud9335Gracilaria caudata M_176_S67 malegeneNODE_199_length_38196_cov_4.525364 1344..2987 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud9335.t2.stop1Gcaud9335.t2.stop1Gracilaria caudata M_176_S67 malestop_codonNODE_199_length_38196_cov_4.525364 1344..1346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud9335.t2.CDS1Gcaud9335.t2.CDS1Gracilaria caudata M_176_S67 maleCDSNODE_199_length_38196_cov_4.525364 1344..2987 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud9335.t2.exon1Gcaud9335.t2.exon1Gracilaria caudata M_176_S67 maleexonNODE_199_length_38196_cov_4.525364 1344..2987 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud9335.t2.start1Gcaud9335.t2.start1Gracilaria caudata M_176_S67 malestart_codonNODE_199_length_38196_cov_4.525364 2985..2987 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud9335.t2Gcaud9335.t2Gracilaria caudata M_176_S67 malepolypeptideNODE_199_length_38196_cov_4.525364 1344..2987 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gcaud9335.t2 ID=Gcaud9335.t2|Name=Gcaud9335.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=548bp
MFKSLLKAAQSLERGMDSAFSNAPASHTAFKNTTLTIAGIPLRLGSVFAE
GGYSFIHVATPVSSRVSSNTRYAVKRLSCAEEESNRQAHREIEFLRQLPS
HPNVVKFYDAILHQGHAFLLFELVDGGTLPELLSRSELSSQRKLNILADI
TAAIVHLHSQQPAIFIRDVKLENVLYDRIQCCYKLCDFGSATTRTWRPAS
RADILAVEEDIANNCTAMYRAPELVDLYSEQLICERADVWSLGCIWYALL
FGSLPFDGSSSLQITKGLVNVPTQSAYPPEFVSLLKNMLVVDPAHRFDSF
QVLEQVNQILGRQVDQQVMDVGSELRARRCADFGVNTNPEYSGTALPVNE
TSVSASAQRLPQSLLGDFDELLSVSERQHVKPISAVSEPKAKSSGMDNSG
WADFDSAFGKPKVGSTPHKVFTSTSQGRTTEWAMSGFDDVPPPARSPTAA
IPQRTAAVRPGGSFESSVLGLSLGQNVTVPKSPAPVSAVSQQGQTTMPSL
IDFSDVTRSSKVSERQQASVLVATVQQQGEKNESGKAANFEDLIDFG*
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spliced messenger RNA

>Gcaud9335.t2 ID=Gcaud9335.t2|Name=Gcaud9335.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1644bp|location=Sequence derived from alignment at NODE_199_length_38196_cov_4.525364:1344..2987- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTAAGTCTCTCCTCAAGGCTGCGCAATCGCTGGAGCGGGGAATGGA
CTCTGCGTTCTCCAATGCCCCGGCCTCGCACACCGCCTTCAAGAACACTA
CCTTGACCATTGCTGGAATCCCTTTGCGTCTCGGCTCTGTGTTTGCCGAA
GGAGGATATTCGTTTATTCATGTTGCTACTCCCGTGTCTTCGCGCGTCTC
CAGCAACACCAGGTACGCTGTCAAGCGCTTGTCTTGCGCAGAAGAAGAAT
CAAACCGTCAGGCCCATCGAGAAATTGAATTTCTTCGACAACTTCCATCA
CATCCAAACGTTGTCAAGTTTTACGACGCCATCCTTCACCAAGGACATGC
GTTTCTGTTGTTTGAACTGGTTGATGGAGGTACTTTGCCAGAATTGCTGT
CTCGCTCTGAATTGTCATCACAAAGAAAACTTAACATACTTGCGGATATA
ACCGCGGCGATTGTGCATTTGCACTCACAACAACCAGCTATATTCATTCG
AGATGTCAAGTTGGAAAACGTCTTGTACGATCGAATACAATGCTGTTATA
AGCTGTGTGATTTCGGCAGTGCTACTACTCGTACATGGCGTCCAGCATCA
CGCGCCGACATCCTGGCGGTCGAAGAAGACATTGCAAATAACTGCACAGC
AATGTATCGAGCACCAGAACTGGTTGATTTGTACTCCGAACAGCTCATCT
GCGAACGTGCTGATGTGTGGTCTTTGGGTTGCATATGGTACGCGCTCTTG
TTTGGTTCGCTACCATTTGATGGCTCTTCGTCATTACAGATCACAAAGGG
CTTGGTCAATGTCCCTACCCAATCAGCATATCCGCCTGAATTCGTATCTC
TGCTGAAGAATATGCTGGTTGTTGATCCCGCGCACCGCTTTGATTCATTC
CAGGTTTTGGAGCAGGTGAATCAAATTCTCGGCCGACAAGTCGACCAACA
AGTTATGGACGTTGGAAGCGAACTCCGAGCGAGACGTTGTGCTGACTTTG
GCGTCAATACCAACCCTGAGTATTCGGGAACTGCTTTGCCTGTCAATGAG
ACCTCCGTGTCAGCTTCTGCACAGCGCTTACCGCAATCACTGCTAGGAGA
CTTTGATGAGCTGTTGTCTGTTTCTGAGCGTCAGCACGTGAAGCCTATTA
GTGCTGTTTCAGAGCCCAAGGCAAAGTCGAGTGGTATGGACAACAGCGGC
TGGGCAGACTTTGATTCCGCTTTTGGCAAGCCAAAGGTGGGCTCGACCCC
GCACAAAGTTTTCACGTCGACCTCACAAGGGCGCACCACAGAATGGGCGA
TGTCTGGTTTTGACGACGTTCCTCCTCCTGCTCGCAGCCCAACTGCGGCT
ATTCCGCAAAGGACTGCCGCTGTAAGGCCGGGAGGTTCGTTCGAGAGTAG
TGTGTTAGGCCTTTCATTGGGTCAGAACGTGACTGTTCCGAAGAGTCCGG
CTCCAGTGTCCGCCGTGAGCCAACAAGGACAGACTACAATGCCGTCTCTA
ATAGATTTTTCAGATGTAACGCGGTCCTCGAAGGTATCTGAAAGACAACA
AGCATCTGTTCTGGTTGCTACTGTGCAACAACAGGGGGAGAAGAATGAGA
GTGGAAAGGCGGCAAACTTTGAGGACCTAATTGATTTTGGATGA
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protein sequence of Gcaud9335.t2

>Gcaud9335.t2 ID=Gcaud9335.t2|Name=Gcaud9335.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=548bp
MFKSLLKAAQSLERGMDSAFSNAPASHTAFKNTTLTIAGIPLRLGSVFAE
GGYSFIHVATPVSSRVSSNTRYAVKRLSCAEEESNRQAHREIEFLRQLPS
HPNVVKFYDAILHQGHAFLLFELVDGGTLPELLSRSELSSQRKLNILADI
TAAIVHLHSQQPAIFIRDVKLENVLYDRIQCCYKLCDFGSATTRTWRPAS
RADILAVEEDIANNCTAMYRAPELVDLYSEQLICERADVWSLGCIWYALL
FGSLPFDGSSSLQITKGLVNVPTQSAYPPEFVSLLKNMLVVDPAHRFDSF
QVLEQVNQILGRQVDQQVMDVGSELRARRCADFGVNTNPEYSGTALPVNE
TSVSASAQRLPQSLLGDFDELLSVSERQHVKPISAVSEPKAKSSGMDNSG
WADFDSAFGKPKVGSTPHKVFTSTSQGRTTEWAMSGFDDVPPPARSPTAA
IPQRTAAVRPGGSFESSVLGLSLGQNVTVPKSPAPVSAVSQQGQTTMPSL
IDFSDVTRSSKVSERQQASVLVATVQQQGEKNESGKAANFEDLIDFG*
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mRNA from alignment at NODE_199_length_38196_cov_4.525364:1344..2987-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gcaud9335.t2 ID=Gcaud9335.t2|Name=Gcaud9335.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1644bp|location=Sequence derived from alignment at NODE_199_length_38196_cov_4.525364:1344..2987- (Gracilaria caudata M_176_S67 male)
ATGTTTAAGTCTCTCCTCAAGGCTGCGCAATCGCTGGAGCGGGGAATGGA
CTCTGCGTTCTCCAATGCCCCGGCCTCGCACACCGCCTTCAAGAACACTA
CCTTGACCATTGCTGGAATCCCTTTGCGTCTCGGCTCTGTGTTTGCCGAA
GGAGGATATTCGTTTATTCATGTTGCTACTCCCGTGTCTTCGCGCGTCTC
CAGCAACACCAGGTACGCTGTCAAGCGCTTGTCTTGCGCAGAAGAAGAAT
CAAACCGTCAGGCCCATCGAGAAATTGAATTTCTTCGACAACTTCCATCA
CATCCAAACGTTGTCAAGTTTTACGACGCCATCCTTCACCAAGGACATGC
GTTTCTGTTGTTTGAACTGGTTGATGGAGGTACTTTGCCAGAATTGCTGT
CTCGCTCTGAATTGTCATCACAAAGAAAACTTAACATACTTGCGGATATA
ACCGCGGCGATTGTGCATTTGCACTCACAACAACCAGCTATATTCATTCG
AGATGTCAAGTTGGAAAACGTCTTGTACGATCGAATACAATGCTGTTATA
AGCTGTGTGATTTCGGCAGTGCTACTACTCGTACATGGCGTCCAGCATCA
CGCGCCGACATCCTGGCGGTCGAAGAAGACATTGCAAATAACTGCACAGC
AATGTATCGAGCACCAGAACTGGTTGATTTGTACTCCGAACAGCTCATCT
GCGAACGTGCTGATGTGTGGTCTTTGGGTTGCATATGGTACGCGCTCTTG
TTTGGTTCGCTACCATTTGATGGCTCTTCGTCATTACAGATCACAAAGGG
CTTGGTCAATGTCCCTACCCAATCAGCATATCCGCCTGAATTCGTATCTC
TGCTGAAGAATATGCTGGTTGTTGATCCCGCGCACCGCTTTGATTCATTC
CAGGTTTTGGAGCAGGTGAATCAAATTCTCGGCCGACAAGTCGACCAACA
AGTTATGGACGTTGGAAGCGAACTCCGAGCGAGACGTTGTGCTGACTTTG
GCGTCAATACCAACCCTGAGTATTCGGGAACTGCTTTGCCTGTCAATGAG
ACCTCCGTGTCAGCTTCTGCACAGCGCTTACCGCAATCACTGCTAGGAGA
CTTTGATGAGCTGTTGTCTGTTTCTGAGCGTCAGCACGTGAAGCCTATTA
GTGCTGTTTCAGAGCCCAAGGCAAAGTCGAGTGGTATGGACAACAGCGGC
TGGGCAGACTTTGATTCCGCTTTTGGCAAGCCAAAGGTGGGCTCGACCCC
GCACAAAGTTTTCACGTCGACCTCACAAGGGCGCACCACAGAATGGGCGA
TGTCTGGTTTTGACGACGTTCCTCCTCCTGCTCGCAGCCCAACTGCGGCT
ATTCCGCAAAGGACTGCCGCTGTAAGGCCGGGAGGTTCGTTCGAGAGTAG
TGTGTTAGGCCTTTCATTGGGTCAGAACGTGACTGTTCCGAAGAGTCCGG
CTCCAGTGTCCGCCGTGAGCCAACAAGGACAGACTACAATGCCGTCTCTA
ATAGATTTTTCAGATGTAACGCGGTCCTCGAAGGTATCTGAAAGACAACA
AGCATCTGTTCTGGTTGCTACTGTGCAACAACAGGGGGAGAAGAATGAGA
GTGGAAAGGCGGCAAACTTTGAGGACCTAATTGATTTTGGATGA
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Coding sequence (CDS) from alignment at NODE_199_length_38196_cov_4.525364:1344..2987-

>Gcaud9335.t2 ID=Gcaud9335.t2|Name=Gcaud9335.t2|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=1644bp|location=Sequence derived from alignment at NODE_199_length_38196_cov_4.525364:1344..2987- (Gracilaria caudata M_176_S67 male)
ATGTTTAAGTCTCTCCTCAAGGCTGCGCAATCGCTGGAGCGGGGAATGGA
CTCTGCGTTCTCCAATGCCCCGGCCTCGCACACCGCCTTCAAGAACACTA
CCTTGACCATTGCTGGAATCCCTTTGCGTCTCGGCTCTGTGTTTGCCGAA
GGAGGATATTCGTTTATTCATGTTGCTACTCCCGTGTCTTCGCGCGTCTC
CAGCAACACCAGGTACGCTGTCAAGCGCTTGTCTTGCGCAGAAGAAGAAT
CAAACCGTCAGGCCCATCGAGAAATTGAATTTCTTCGACAACTTCCATCA
CATCCAAACGTTGTCAAGTTTTACGACGCCATCCTTCACCAAGGACATGC
GTTTCTGTTGTTTGAACTGGTTGATGGAGGTACTTTGCCAGAATTGCTGT
CTCGCTCTGAATTGTCATCACAAAGAAAACTTAACATACTTGCGGATATA
ACCGCGGCGATTGTGCATTTGCACTCACAACAACCAGCTATATTCATTCG
AGATGTCAAGTTGGAAAACGTCTTGTACGATCGAATACAATGCTGTTATA
AGCTGTGTGATTTCGGCAGTGCTACTACTCGTACATGGCGTCCAGCATCA
CGCGCCGACATCCTGGCGGTCGAAGAAGACATTGCAAATAACTGCACAGC
AATGTATCGAGCACCAGAACTGGTTGATTTGTACTCCGAACAGCTCATCT
GCGAACGTGCTGATGTGTGGTCTTTGGGTTGCATATGGTACGCGCTCTTG
TTTGGTTCGCTACCATTTGATGGCTCTTCGTCATTACAGATCACAAAGGG
CTTGGTCAATGTCCCTACCCAATCAGCATATCCGCCTGAATTCGTATCTC
TGCTGAAGAATATGCTGGTTGTTGATCCCGCGCACCGCTTTGATTCATTC
CAGGTTTTGGAGCAGGTGAATCAAATTCTCGGCCGACAAGTCGACCAACA
AGTTATGGACGTTGGAAGCGAACTCCGAGCGAGACGTTGTGCTGACTTTG
GCGTCAATACCAACCCTGAGTATTCGGGAACTGCTTTGCCTGTCAATGAG
ACCTCCGTGTCAGCTTCTGCACAGCGCTTACCGCAATCACTGCTAGGAGA
CTTTGATGAGCTGTTGTCTGTTTCTGAGCGTCAGCACGTGAAGCCTATTA
GTGCTGTTTCAGAGCCCAAGGCAAAGTCGAGTGGTATGGACAACAGCGGC
TGGGCAGACTTTGATTCCGCTTTTGGCAAGCCAAAGGTGGGCTCGACCCC
GCACAAAGTTTTCACGTCGACCTCACAAGGGCGCACCACAGAATGGGCGA
TGTCTGGTTTTGACGACGTTCCTCCTCCTGCTCGCAGCCCAACTGCGGCT
ATTCCGCAAAGGACTGCCGCTGTAAGGCCGGGAGGTTCGTTCGAGAGTAG
TGTGTTAGGCCTTTCATTGGGTCAGAACGTGACTGTTCCGAAGAGTCCGG
CTCCAGTGTCCGCCGTGAGCCAACAAGGACAGACTACAATGCCGTCTCTA
ATAGATTTTTCAGATGTAACGCGGTCCTCGAAGGTATCTGAAAGACAACA
AGCATCTGTTCTGGTTGCTACTGTGCAACAACAGGGGGAGAAGAATGAGA
GTGGAAAGGCGGCAAACTTTGAGGACCTAATTGATTTTGGATGA
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