Gcaud1228.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1228.t1
Unique NameGcaud1228.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length230
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1228.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 182..200
score: 40.13
coord: 43..54
score: 36.46
coord: 145..155
score: 39.77
coord: 120..135
score: 48.44
coord: 2..18
score: 20.59
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1993_length_7292_cov_4.533259contigNODE_1993_length_7292_cov_4.533259:5962..6651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1228.t1Gcaud1228.t1Gracilaria caudata M_176_S67 malemRNANODE_1993_length_7292_cov_4.533259 5962..6651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1228.t1 ID=Gcaud1228.t1|Name=Gcaud1228.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=230bp
MKIALALALCLSLAQAAVVPTVRQRGGNGGRGGDGVLIGDGGRGGIGGAG
GNGGRGGGNGGDGGNGVLVGDFGIGGFGGAGGRGGDANEFGDGGRGGNGG
GGALYGDFGYGGIGGPGGAGGAGGTIAGNGGRGGDGGPGLLVGDFGIGGF
GGAGGQGGRASFGIGGDGGDGGTGALYGDFGYGGIGGPGGRGGDGFIGGN
GGNGGLGQLVGDFGVGGVGGLGGDGGDQI*
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