Gcaud1204.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1204.t1
Unique NameGcaud1204.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length87
Homology
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A1X6P5U6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5U6_PORUM)

HSP 1 Score: 110 bits (275), Expect = 3.490e-29
Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0
Query:   12 VLTPLSPDVSVVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFF 84
            V+  + P   V++GSIAL +PF VA+VLFGERI RQR C  C GSGLV+KGRFM+RC  CGGFLPWQ+W++FF
Sbjct:   69 VVNDVGPTAEVIIGSIALCVPFVVASVLFGERIVRQRRCPTCEGSGLVQKGRFMRRCRTCGGFLPWQSWRQFF 141          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A2G3DH47_CAPCH (A2L_zn_ribbon domain-containing protein n=3 Tax=Capsicum TaxID=4071 RepID=A0A2G3DH47_CAPCH)

HSP 1 Score: 98.2 bits (243), Expect = 1.990e-24
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   22 VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            +VVGS+A   PF VA V F +RI +QR C  C GSGLV K +F KRCP CGGFLPWQ+W+RFFTG
Sbjct:   76 IVVGSLAGVTPFVVAGVEFSKRIVKQRKCEVCGGSGLVLKNKFYKRCPSCGGFLPWQSWRRFFTG 140          
BLAST of Gcaud1204.t1 vs. uniprot
Match: M1CX50_SOLTU (A2L_zn_ribbon domain-containing protein n=5 Tax=Solanum TaxID=4107 RepID=M1CX50_SOLTU)

HSP 1 Score: 96.7 bits (239), Expect = 5.050e-24
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   22 VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            +V GS+A   PF VA V F +RI +QR C  C GSGLV K +F KRCP CGGFLPWQ+W+RFFTG
Sbjct:   59 IVAGSLAGVTPFVVAGVEFSKRIVKQRKCEVCGGSGLVLKNKFYKRCPNCGGFLPWQSWRRFFTG 123          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A1S3YFC4_TOBAC (uncharacterized protein LOC107775508 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YFC4_TOBAC)

HSP 1 Score: 96.7 bits (239), Expect = 7.020e-24
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0
Query:   13 LTPLSPDVS--VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLV-KKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            LT   PD++  +VVGS+A   PF VA + F +RI +QR C  C GSGLV K  +F KRCP CGGFLPWQ+W+RFFTG
Sbjct:   59 LTTSDPDITWQIVVGSLAGVTPFVVAGIEFSKRIVKQRKCEVCGGSGLVLKNNKFYKRCPDCGGFLPWQSWRRFFTG 135          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A1Y1IE18_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE18_KLENI)

HSP 1 Score: 93.6 bits (231), Expect = 2.310e-23
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   17 SPDVSVVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFF 84
            S DV V+VG++A   PF VA + F +RI +QR C  C GSGLV +GR+ +RC  CGGFLPWQ+WKRFF
Sbjct:    6 SVDVPVIVGTVAGVTPFVVAGIEFSKRIVQQRRCEVCKGSGLVLRGRYYRRCNACGGFLPWQSWKRFF 73          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A1S3XXB8_TOBAC (uncharacterized protein LOC107769628 n=3 Tax=Nicotiana TaxID=4085 RepID=A0A1S3XXB8_TOBAC)

HSP 1 Score: 95.1 bits (235), Expect = 2.610e-23
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   18 PDVS--VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLV-KKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            PD++  +VVGS+A   PF VA + F +RI +QR C  C GSGLV K  +F KRCP CGGFLPWQ+W+RFFTG
Sbjct:   61 PDITWQIVVGSLAGVTPFVVAGIEFSKRIVKQRKCEVCGGSGLVLKNNKFYKRCPDCGGFLPWQSWRRFFTG 132          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A1U8L0E2_GOSHI (uncharacterized protein LOC107921151 n=14 Tax=Gossypium TaxID=3633 RepID=A0A1U8L0E2_GOSHI)

HSP 1 Score: 94.0 bits (232), Expect = 9.230e-23
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   22 VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            +VVG++A   PFFVA + F +RI  QR C +C GSGLV +G    +CP+CGGFLPWQ+WKRFFTG
Sbjct:   76 IVVGALAGVTPFFVAGIEFSKRIIAQRRCGECRGSGLVFRGNDYFKCPECGGFLPWQSWKRFFTG 140          
BLAST of Gcaud1204.t1 vs. uniprot
Match: M1CX49_SOLTU (A2L_zn_ribbon domain-containing protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1CX49_SOLTU)

HSP 1 Score: 91.3 bits (225), Expect = 1.380e-22
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   32 PFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            PF VA V F +RI +QR C  C GSGLV K +F KRCP CGGFLPWQ+W+RFFTG
Sbjct:   11 PFVVAGVEFSKRIVKQRKCEVCGGSGLVLKNKFYKRCPNCGGFLPWQSWRRFFTG 65          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A8B8ZGV8_PHODC (uncharacterized protein LOC103698011 isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B8ZGV8_PHODC)

HSP 1 Score: 91.7 bits (226), Expect = 5.420e-22
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   22 VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            V VG++A   PF VA + FG+RI  QR C  C GSGLV +  F  RCP CGGFLPWQ+WKRFFTG
Sbjct:   64 VAVGALAGITPFVVAGIEFGKRIVAQRKCGVCGGSGLVLRNDFYVRCPGCGGFLPWQSWKRFFTG 128          
BLAST of Gcaud1204.t1 vs. uniprot
Match: A0A103Y4E9_CYNCS (Uncharacterized protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y4E9_CYNCS)

HSP 1 Score: 91.7 bits (226), Expect = 5.570e-22
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
Query:   15 PLSPDVS--VVVGSIALAIPFFVAAVLFGERIYRQRTCAQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG 86
            P++P ++  +VVGSIA   PF VA + F +RI  Q+ C QC GSGLV   +   RCP CGGFLPWQ+WKRFF+G
Sbjct:   56 PITPQITWQIVVGSIAGVTPFVVAGIEFSKRIVAQKQCVQCGGSGLVLMEKEYIRCPNCGGFLPWQSWKRFFSG 129          
The following BLAST results are available for this feature:
BLAST of Gcaud1204.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X6P5U6_PORUM3.490e-2964.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2G3DH47_CAPCH1.990e-2464.62A2L_zn_ribbon domain-containing protein n=3 Tax=Ca... [more]
M1CX50_SOLTU5.050e-2463.08A2L_zn_ribbon domain-containing protein n=5 Tax=So... [more]
A0A1S3YFC4_TOBAC7.020e-2458.44uncharacterized protein LOC107775508 n=1 Tax=Nicot... [more]
A0A1Y1IE18_KLENI2.310e-2358.82Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1S3XXB8_TOBAC2.610e-2359.72uncharacterized protein LOC107769628 n=3 Tax=Nicot... [more]
A0A1U8L0E2_GOSHI9.230e-2360.00uncharacterized protein LOC107921151 n=14 Tax=Goss... [more]
M1CX49_SOLTU1.380e-2267.27A2L_zn_ribbon domain-containing protein n=1 Tax=So... [more]
A0A8B8ZGV8_PHODC5.420e-2261.54uncharacterized protein LOC103698011 isoform X1 n=... [more]
A0A103Y4E9_CYNCS5.570e-2255.41Uncharacterized protein n=1 Tax=Cynara cardunculus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36809TRANSMEMBRANE PROTEINcoord: 21..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 44..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1977_length_7374_cov_5.226967contigNODE_1977_length_7374_cov_5.226967:3005..3344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1204.t1Gcaud1204.t1Gracilaria caudata M_176_S67 malemRNANODE_1977_length_7374_cov_5.226967 3005..3344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1204.t1 ID=Gcaud1204.t1|Name=Gcaud1204.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=87bp
MQLAPESLSPDVLTPLSPDVSVVVGSIALAIPFFVAAVLFGERIYRQRTC
AQCNGSGLVKKGRFMKRCPKCGGFLPWQNWKRFFTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf