Gcaud1921.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1921.t1
Unique NameGcaud1921.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length156
Homology
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BLAST of Gcaud1921.t1 vs. uniprot
Match: A0A2V3IPU1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU1_9FLOR)

HSP 1 Score: 179 bits (454), Expect = 2.320e-55
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 0 
Query:    1 MSLTRERLDGADEYLKMDWDVIHIFNHTKSIITLPSSKTTLTSNEAEALPLLFNSREYALRAGIVLNSESFDVHQWESTKGVDLVYGRRGDAVSGEGACAFRFKTSDYPEVHGAITYSFPSLSTNAVTKLISFLNDLP 138
            M L  E    A++YLK DWDV+HIF H +S+ T+PS++  ++S EA A+P LF SR +ALRAGI+LNS+ F VHQWE+T+GVDL YGRRGDA+SG GAC FR+K  +    +GAITYSFPSLS NAVTKLISFLN LP
Sbjct:    1 MLLESEWHSSAEKYLKSDWDVLHIFEHAQSVTTIPSTQQRISSKEASAIPPLFTSRHFALRAGILLNSQHFHVHQWETTRGVDLAYGRRGDALSGVGACVFRYKKHN-STFYGAITYSFPSLSANAVTKLISFLNSLP 137
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BLAST of Gcaud1921.t1 vs. uniprot
Match: R7Q5D8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5D8_CHOCR)

HSP 1 Score: 96.7 bits (239), Expect = 4.230e-23
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:   52 LFNSREYALRAGIVLNSESFDVHQWESTKGVDLVYGRRGDAVSGEGACAFRFKTSDYPEVHGAITYSFPSLSTNAVTKLI 131
            LF S EYA+RAGI L+  S+ VHQ+E+T+GVDLVYGR GDAVSG GAC  R + ++   ++ A++Y FPSLS NAV +L+
Sbjct:    8 LFTSAEYAVRAGIALSGASYAVHQYETTRGVDLVYGRTGDAVSGSGACVARVQQANGDCIYAAVSYDFPSLSANAVPELV 87
The following BLAST results are available for this feature:
BLAST of Gcaud1921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IPU1_9FLOR2.320e-5563.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5D8_CHOCR4.230e-2357.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR41752FAMILY NOT NAMEDcoord: 17..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_105_length_50300_cov_4.471768contigNODE_105_length_50300_cov_4.471768:12991..13575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1921.t1Gcaud1921.t1Gracilaria caudata M_176_S67 malemRNANODE_105_length_50300_cov_4.471768 12991..13575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1921.t1 ID=Gcaud1921.t1|Name=Gcaud1921.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=156bp
MSLTRERLDGADEYLKMDWDVIHIFNHTKSIITLPSSKTTLTSNEAEALP
LLFNSREYALRAGIVLNSESFDVHQWESTKGVDLVYGRRGDAVSGEGACA
FRFKTSDYPEVHGAITYSFPSLSTNAVTKLISFLNDLPNKLESLRKTDSS
ISEAT*
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