Gcaud766.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud766.t1
Unique Name	Gcaud766.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	504

Homology

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BLAST of Gcaud766.t1 vs. uniprot
Match: A0A2V3IFS9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS9_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 3.840e-18
Identity = 59/190 (31.05%), Postives = 91/190 (47.89%), Query Frame = 0

Query:  148 GRHVPECFDNASLTEIFHAYQEQKQSFEKCPDISQLLKGLLNSEQPKWKKLLQD--------EKVLSSSDDGSGDQPSDT-------GSVPDFSLNEFARLCILLRDDDLARAAMRNAVGLELTRLQLEDGITRDSFWGTVEERFNDTSVVTSESFTGSLDGIDSNRAPLAHRSATQLKTQYTTAKADFT 322
            G  + E   N+S  +     Q      + CPD + LL+     E+  W   ++         +K L         +P D          VP F+L+EFARL ++++DD+ AR A+  AVGL L R +L+D + RD  +  V +RFND ++ T    +  L+ +D +R P+  RS   LK  Y  A+ DFT
Sbjct:   10 GVSLQELLTNSSFVQDLRKLQHSNVILQSCPDDAHLLELFEQRERDLWTSYMEQIRARVCEAQKTLHCEA-----EPEDLLLLRHKPNGVPKFTLDEFARLALVIKDDETARKAIMKAVGLPLDRQELDDRVGRDEDFSVVADRFNDQTLSTIADLSNVLEKVDPSRMPVVKRSPFLLKRHYQEARKDFT 194

[Close]

BLAST of Gcaud766.t1 vs. uniprot
Match: A0A2V3IJP7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP7_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 1.570e-15
Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 0

Query:   99 IDILFTILHKRHNKVELQDLSGTVGLTKRGNKSHVVSRLMLQAIIHEHNGRHVPECFDNASLTEIFHAYQEQKQSFEKCPDISQLLKGLLNSEQPKWKKLLQD--------EKVLSSSDDGSGDQPSDT-------GSVPDFSLNEFARLCILLRDDDLARAAMRNAVGLELTRLQLEDGITRD 267
            ID L+T L  R  K +L  L+  +G+TKRG K+ V++RLM++A      G  + E   N+S  +     Q      + CPD + LL+     E+  W   ++         +K L         +P D          VP F+L+EFARL ++++DD+ A+ A+  AVGL L R +L+D + RD
Sbjct:   70 IDALYTYL-SRKTKDQLLSLASPIGVTKRGKKNRVLARLMMKAKAKALLGVSLQELLTNSSSLQDLRELQHSNVILQSCPDDAHLLELFEQRERDLWTSYMEQIRARVCEAQKTLHCEA-----EPEDLLLLRHKPNGVPKFTLDEFARLVLVIKDDETAQKAIMKAVGLPLDRRELDDRVGRD 247

The following BLAST results are available for this feature:

BLAST of Gcaud766.t1 vs. uniprot

BLAST of Gcaud766.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IFS9_9FLOR	3.840e-18	31.05	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IJP7_9FLOR	1.570e-15	32.07	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1908_length_7739_cov_5.618985	contig	NODE_1908_length_7739_cov_5.618985:76..1587 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud766.t1	Gcaud766.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1908_length_7739_cov_5.618985 76..1587 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud766.t1 ID=Gcaud766.t1|Name=Gcaud766.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=504bp
MELRCTPERIAARARRLSDSHNQQPYPNTIQPSDCRLPAPSIPIPTVSLN
DLLNVPLPDDDESNNSEQIVANPSEQHDLPLSSAISTQCPEPNDEPRTID
ILFTILHKRHNKVELQDLSGTVGLTKRGNKSHVVSRLMLQAIIHEHNGRH
VPECFDNASLTEIFHAYQEQKQSFEKCPDISQLLKGLLNSEQPKWKKLLQ
DEKVLSSSDDGSGDQPSDTGSVPDFSLNEFARLCILLRDDDLARAAMRNA
VGLELTRLQLEDGITRDSFWGTVEERFNDTSVVTSESFTGSLDGIDSNRA
PLAHRSATQLKTQYTTAKADFTDAHSMWSQSGQNDPQRFVDFLPKFRNEL
LSASKRSLVLFLVCRCGTPIVDTNLLHLVSRVTANGVGFDTFAQENERGL
DGPLRQKKRSSADSGSILKDCLAQVSKTSACITEAFNKKNPAVENDERNA
RVHKNLELLRAELRNRRLDKAFEEDDAEARGESVLKEWSVKHINNLIKSL
EGG*