Gcaud8101.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8101.t1
Unique NameGcaud8101.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length904
Homology
BLAST of Gcaud8101.t1 vs. uniprot
Match: A0A2V3IRP7_9FLOR (TOG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP7_9FLOR)

HSP 1 Score: 557 bits (1436), Expect = 4.960e-178
Identity = 410/950 (43.16%), Postives = 531/950 (55.89%), Query Frame = 0
Query:   10 TGPLPSALLKKLDTLTPWHEQVEALQQLADLTVPLSKKANTDAIMRQLRPYGHDLAGVINNPRSTLVKEACLCIEALAETFGPKFVAAVGTEVIPALLNRCAITKAVIRDSSREAAKAMFEHGVEGVFIGTARFISQTVLDKQAPVLIRTAAAEFIGMILVERCRGSLSDIHQLISDAIIGGCSDSDETVRAISRDNCCRLLELEPTLGDEVFEELPTNAQQYIAGFRSLPKAGEEASRTRRASMMPQRARPRPESFAGNVPASLKARYAPSRLHRASINPVDLGTQALFSDSIPPRTSILPRPSRVEFEPKANLPRKHSRPTLRPPRRSMVPKTASVDMENNAVRDENVSKTSP-----STRVIAPSHSLIKPSSSAEFTHERSKRSATQCASTQAQDIKNRSPSQS--PVSMNAPAGAEDAKKTSLAILTESTEKSNCENEQGTPLSSTASTASKTSGSMPSGEPSTGPSPRNDAGAVDNPSRTFSNCSEP-------------------HSPTETKPISNRLCSPT--PVSSEACKXXXNSQGSPSCDEAPFGKKSNSHAPSMSNERSNRVVEEESVKR-VNKGRLSFIMGVNETPQVIRARSLLRPDMSASAFMMSPGSIKREGEDTDVGDEMDIDTMDAVDEAGGSEAARSAENGHTLRTEVKQIDKS---GDDLGETERTTQDMERGATLEGRLESTAEQVTTGESTESRD----LEQTATSNESERRFSEEACATTTLDSGAQTGKDEEEKINDSDRDADSTEQLLKTPQLCMPDISDFAELMADIEKQALSSVAPNVTLSYEMAA-------------GSLSNDKENKASE---TRKQKRVQLAVNHGARKDSADMKPPAQKSRAASFKGRPPRRSLMPQNVAASAA--------STGEDRSMEKK-KLAKPPQQPRKTTTRKQIERKASTKAVDSATSRHK 898
            +GPLP +LL KL+  T W +QVEALQQLADLT+PLSK+AN DAIMRQLRPYG +LA  I +PRSTLVKEAC+C+E LAETFGP FVAAVG EVIPALL RC+ITKA+IR+S+REAAKAMFEHGVEGV + TAR ISQTV+DKQ+P L R AAAE IG++LVERCR  LSDIH L+ +AI+ GC D D TVR ISRDNC RLL L+P L + VF +LPT+A+QYIA  R      +E+   RRASM+PQRARPR ES    +   L+ RYAP R+ RAS+NPVDLG+Q+LF D++PPR   LPRPSRV+ + + NLPRK  RP LRPPRRS+ P     ++   AV++E  S + P     STR +   H    PS +     E                 +  SP +   P   N  +   ++K T  +I+ E TE+S    +    L+S A++ +K +      E   G S  +  G   +   + S C E                     SPTET+ I      P   P  ++  K   NS  SP  +  PF +           E SNR+ E   +K+ VNKGRLSFIMGVN+TP+V R  S+ RPDMS    + SP +   E    +  DE   DT    DEA       ++      ++ V   D+S          E +  +          +  +A Q  T  S +  D    +E     +E++   S EA  +        T  ++ ++       +DSTEQLLKTPQ+ MPDI DFA+LM DIEKQ L +VAP ++L+ +                GS  +D + + ++    RK++RVQL V    R+D+ADMKPP QKSRAASFKGRPPRRSLMPQ V   A          TGE +  +K  K  K   +  +  TRK + RK S   V   T R K
Sbjct:   15 SGPLPPSLLHKLEPSTLWDDQVEALQQLADLTIPLSKQANVDAIMRQLRPYGLNLAEAIQSPRSTLVKEACMCVETLAETFGPNFVAAVGIEVIPALLGRCSITKAIIRESAREAAKAMFEHGVEGVHLSTARLISQTVVDKQSPTLTRAAAAELIGLMLVERCRDGLSDIHDLVHNAIVEGCGDPDGTVREISRDNCSRLLRLDPALWERVFRDLPTHAKQYIAKPRDRVGGVDESVLPRRASMVPQRARPRHESMHTGMSVGLRGRYAPVRVQRASVNPVDLGSQSLFKDTMPPRVPNLPRPSRVDLDFRPNLPRKPFRPVLRPPRRSIAPFIPQNNINVCAVKEEPASTSPPLQSNTSTRSVEQDH---VPSHTRGLVVE-----------------EKVSPKERILPEDDNPDSFQLESKTTKESIVGEGTEESG---KHSLYLASPANSETKNACGESEHEAQQGESEDSSMGICLSAKSSKSRCIETDSTGTAEEAERAPIPSLIIRSPTETRSICGSPSPPQQPPAENKETKGNRNSICSP--ESTPFREGDG--------EPSNRLTESPGLKKYVNKGRLSFIMGVNQTPRVNRTASMGRPDMSIVKLIDSPTTPTNENA-VNRTDEEKADTALTFDEANKQIDCAASSPSSVEKSLVAIEDESVPXXXXXXXXESSAMETRTPNPATSMVSESANQRATPPSQKMIDECERIESDDAESETKNAASSEASPSPESSDSELTQDEKPKEAQACHGRSDSTEQLLKTPQMGMPDIPDFAKLMEDIEKQTLCNVAPAMSLAQKAEVMNRAPVAEDGAQNGSEKSDSDKENADDGSARKERRVQLNVPQAIRRDAADMKPP-QKSRAASFKGRPPRRSLMPQAVTTGAGLTAGSTRVETGETKDDKKDMKELKSGTKRDEVDTRKGLVRKTSDSKVGRGTGRSK 929          
BLAST of Gcaud8101.t1 vs. uniprot
Match: R7QH66_CHOCR (CLASP_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH66_CHOCR)

HSP 1 Score: 147 bits (370), Expect = 3.090e-32
Identity = 119/349 (34.10%), Postives = 166/349 (47.56%), Query Frame = 0
Query:   12 PLPSALLKKL-DTLTPWHEQVEALQQL-----ADLTVPLSKKANTDAIMRQLRPYGHDLAGVINNPRSTLVKEACLCIEALAETFGPKFVAAVGTEVIPALLNRCAITKAVIRDSSREAAKAMFEHGVEGVFIGTARFISQTVLDKQAPVLIRTAAAEFIGMILVERCRGSLSDIHQLISDAIIGGCSDSDETVRAISRDNCCRLLELEPTLGDEVFEELPTNAQQYIAGFRSLPKAGEEASRTRRASMMPQRARPRPESFAGNVPASLKARYAPS--RLHRASINPVDLGTQALFSDSIPPRTSILPRPSRVEFEPKANLPRKHSRPTLRPPRRSMVPKTASVDMENN 352
            PLP  +L  L D    W +Q +AL+ L     +D     + +A  +  +RQLR  G  LA  I  PRSTLV+EA  CI    E FGP FV  VG  +   +L++  ++ AVIR+S+ EA KA+FEHGV G        + + V + +   L R AAA+F+GM+LVE C   L  I   I  AI+ GC DSDE VRA+SR+N  +L  L+ +   ++  E+P N    IA      K G   S         QR  P      G        RY P+  RLH   +    +   A  S S   R ++    +     P + + R   R  +R PR    P+  +VD  +N
Sbjct:   15 PLPPFVLATLRDPEAEWEDQRDALKALTAAAKSDAVARPNSQARHE-FLRQLRDVGQPLATCIAAPRSTLVREASQCIIQCVEVFGPLFVDTVGNTLARPILDKTGVSIAVIRESAFEAGKALFEHGVTGFSPDIVNMLCEYVQNSKLSSLKRAAAAQFLGMVLVEDCLAGLEPIMGSIQRAIVRGCQDSDERVRALSRENWRKLEILDRSSARQLLNEMPANTTALIAR----EKGGSPWSEKSAGGRFEQRKSP---GSPGRTFKFAPQRYPPTAKRLHPQRVTSESVVESADISPSTAIRRAVTSHTTTTSSLPTSRVGRTQ-RTAVRLPR----PQVRAVDSGSN 350          
The following BLAST results are available for this feature:
BLAST of Gcaud8101.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRP7_9FLOR4.960e-17843.16TOG domain-containing protein n=1 Tax=Gracilariops... [more]
R7QH66_CHOCR3.090e-3234.10CLASP_N domain-containing protein n=1 Tax=Chondrus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034085TOG domainSMARTSM01349TOG_3coord: 8..245
e-value: 7.7E-4
score: 28.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 15..240
e-value: 8.1E-28
score: 99.6
IPR024395CLASP N-terminal domainPFAMPF12348CLASP_Ncoord: 27..233
e-value: 1.4E-13
score: 51.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..793
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..904
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..895
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..751
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 22..517
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 28..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1900_length_7801_cov_4.488067contigNODE_1900_length_7801_cov_4.488067:4016..6725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8101.t1Gcaud8101.t1Gracilaria caudata M_176_S67 malemRNANODE_1900_length_7801_cov_4.488067 4016..6725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8101.t1 ID=Gcaud8101.t1|Name=Gcaud8101.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=904bp
MTSSTGCDWTGPLPSALLKKLDTLTPWHEQVEALQQLADLTVPLSKKANT
DAIMRQLRPYGHDLAGVINNPRSTLVKEACLCIEALAETFGPKFVAAVGT
EVIPALLNRCAITKAVIRDSSREAAKAMFEHGVEGVFIGTARFISQTVLD
KQAPVLIRTAAAEFIGMILVERCRGSLSDIHQLISDAIIGGCSDSDETVR
AISRDNCCRLLELEPTLGDEVFEELPTNAQQYIAGFRSLPKAGEEASRTR
RASMMPQRARPRPESFAGNVPASLKARYAPSRLHRASINPVDLGTQALFS
DSIPPRTSILPRPSRVEFEPKANLPRKHSRPTLRPPRRSMVPKTASVDME
NNAVRDENVSKTSPSTRVIAPSHSLIKPSSSAEFTHERSKRSATQCASTQ
AQDIKNRSPSQSPVSMNAPAGAEDAKKTSLAILTESTEKSNCENEQGTPL
SSTASTASKTSGSMPSGEPSTGPSPRNDAGAVDNPSRTFSNCSEPHSPTE
TKPISNRLCSPTPVSSEACKSTPNSQGSPSCDEAPFGKKSNSHAPSMSNE
RSNRVVEEESVKRVNKGRLSFIMGVNETPQVIRARSLLRPDMSASAFMMS
PGSIKREGEDTDVGDEMDIDTMDAVDEAGGSEAARSAENGHTLRTEVKQI
DKSGDDLGETERTTQDMERGATLEGRLESTAEQVTTGESTESRDLEQTAT
SNESERRFSEEACATTTLDSGAQTGKDEEEKINDSDRDADSTEQLLKTPQ
LCMPDISDFAELMADIEKQALSSVAPNVTLSYEMAAGSLSNDKENKASET
RKQKRVQLAVNHGARKDSADMKPPAQKSRAASFKGRPPRRSLMPQNVAAS
AASTGEDRSMEKKKLAKPPQQPRKTTTRKQIERKASTKAVDSATSRHKRV
TASX
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034085TOG
IPR011989ARM-like
IPR024395CLASP_N_dom
IPR016024ARM-type_fold