Gcaud1866.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A2V3IKS1_9FLOR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKS1_9FLOR) HSP 1 Score: 305 bits (782), Expect = 7.120e-102 Identity = 160/259 (61.78%), Postives = 196/259 (75.68%), Query Frame = 0
Query: 1 MSQPTSKPQQVSQFPLPPRRYYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCDELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEAADEVTQPSYQLSQAATTYLQSLQXXXXXXXXXXXXXXTTHAHLSQPIPHAANNSTLVFDDMMPALFTPPKRSTSQLMRDIDNIVNDPNL 259
M+ ++KPQQVSQFPLPPRRYYQSI+TQP+HPP +N SY MFGR+Y+T+ +LP+LE +GRKR+YDP+ PC ELR LN SLL+LFL LV QLC P+T ESP PHK II +IEDTF+NMQHLINTMRPAQAAMDLK LLDNQTASRK+ T+NLK+SVK AWDLIA+AAD+++QPSYQLS+ ATTY+Q LQ TH H + H STL FDD+MPA PPK ++L+++I +I+N P L
Sbjct: 1 MAHQSAKPQQVSQFPLPPRRYYQSISTQPLHPPXXXXANHSYSMFGRVYTTDDVLPTLEHAGRKRLYDPAGSPCSELRTLNNSLLELFLNLVDQLCDPLTHESPSDPHKQIIDRIEDTFINMQHLINTMRPAQAAMDLKALLDNQTASRKQITDNLKDSVKTAWDLIADAADKLSQPSYQLSETATTYMQRLQNPNQQPPME------TH-HQPNKV-HNGTASTL-FDDLMPASPAPPKPPATELLQNITHIMNHPTL 250
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A7S3E8B0_9RHOD (Mediator of RNA polymerase II transcription subunit 7 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8B0_9RHOD) HSP 1 Score: 95.1 bits (235), Expect = 1.160e-19 Identity = 65/194 (33.51%), Postives = 99/194 (51.03%), Query Frame = 0
Query: 11 VSQFPLPPRRYYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPS---APPCD-----------------------ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEAADEVTQPS 178
VSQ+P PP +++ + PP P+ +Y MFG +Y+TE LPSLE+SGRK +YDP A P + ELRKLN LL FLKLV LC E+ ++ +++IE+ +NM HL NT+R QA +K ++ QT R + +L ++ +A ++ A + + + S
Sbjct: 7 VSQWPAPPAMFFRDGVADKV-PPKAPAQGGTYSMFGDVYTTEDKLPSLEESGRKVLYDPKEKYALPTNLQRSGWERTNQDYSNRFLHRRTVELRKLNKMLLNKFLKLVQSLCSNPNTEA----YRTEVEEIENVLINMHHLANTLRTDQAHQTVKRQIERQTELRSKALSDLDKAFDEARGVLRSARNMLQESS 195
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A5J4YJP9_PORPP (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJP9_PORPP) HSP 1 Score: 91.3 bits (225), Expect = 1.480e-18 Identity = 53/137 (38.69%), Postives = 84/137 (61.31%), Query Frame = 0
Query: 11 VSQFPLPPRRYYQSIAT--QPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCDELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQ 145
VSQFP PP+R ++ A+ + PPPLP +Y FG +ST+ +P+LE+SGRK+++D + P + LR LNA LL+++ ++V + ++ V+PH D ++E VNM LIN++R QA + L L+ Q
Sbjct: 4 VSQFPRPPQRLFEGFASLGELPSPPPLPEGT-TYSCFGGTWSTQFTMPTLEESGRKQLFDANVPATESLRMLNARLLKVYEEVVQNIAQEAEHDA-VKPHVD---ELELVIVNMHFLINSLRVPQARLQLAKLITEQ 135
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A0K9PG54_ZOSMR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PG54_ZOSMR) HSP 1 Score: 82.8 bits (203), Expect = 5.990e-16 Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = 0
Query: 14 FPLPPRRY--YQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVY--DPSAPPCDELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEAAD 172
+P PP Y Y+ + P PPPLP +Y +FG Y+T+ +LPSLE+ G +++Y D + ELR LN L FL+L + E P Q + I++I F NM HL+N +RP QA L LL+ Q RK+ E++K K+A ++ EA +
Sbjct: 7 YPPPPPFYKLYKDAKSGPDPPPPLPKGA-TYTLFGATYTTDDVLPSLEEQGVRQLYPKDSNIDYKKELRALNRDLQLNFLELA-----DVLVERPSQ-YAQRIEEISTIFKNMHHLLNCLRPLQAQATLIHLLELQIERRKQAIEDIKMRRKEAQRMLKEAME 162
BLAST of Gcaud1866.t1 vs. uniprot
Match: J3M2B3_ORYBR (Mediator of RNA polymerase II transcription subunit 7 n=12 Tax=Oryzeae TaxID=147380 RepID=J3M2B3_ORYBR) HSP 1 Score: 77.4 bits (189), Expect = 7.760e-14 Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 21 YYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
Y + ++ P PPP+ + YQ+FG Y+T+ +LPSLE G +++Y P +P D ELR LN L L+L I E P Q + ++ I F N+ HL+N++RP QA L +L+NQ RK+ E++K+ ++A L+ E+
Sbjct: 20 YEKDPSSAPEPPPPV---DGPYQLFGATYTTDVVLPSLEDQGVRQLY-PKSPNIDFKKELRTLNRELQLHILELA-----DILVERPSQ-YARRVEDISLIFKNLHHLLNSLRPHQARATLIHMLENQIQRRKQAIEDIKQRREEAQKLLGES 162
BLAST of Gcaud1866.t1 vs. uniprot
Match: B9T018_RICCO (Mediator of RNA polymerase II transcription subunit 7 n=6 Tax=rosids TaxID=71275 RepID=B9T018_RICCO) HSP 1 Score: 75.5 bits (184), Expect = 3.390e-13 Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 0
Query: 14 FPLPP---RRYYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
+P PP R Y I P P P + +Y FG Y+TE++LPSLE+ G +++Y P P D ELR LN L L+L + E P Q + ++ I F N+ HL+N++RP QA L +L+ Q RK+ E++K ++A L+ EA
Sbjct: 6 YPPPPPYYRLYKDYIENPKSAPEPPPPIDGTYTCFGANYTTEYVLPSLEEQGVRQLY-PKGPNVDFKKELRSLNRELQLHILEL-----SDVLVERPSQ-YARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKEA 161
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A2C9VD86_MANES (Mediator of RNA polymerase II transcription subunit 7 n=3 Tax=rosids TaxID=71275 RepID=A0A2C9VD86_MANES) HSP 1 Score: 75.5 bits (184), Expect = 3.390e-13 Identity = 55/153 (35.95%), Postives = 83/153 (54.25%), Query Frame = 0
Query: 21 YYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
Y Q+ + P PPP+ +Y FG Y+T+++LPSLE+ G +R+Y P+ P D ELR LN L L+L L E P Q + ++ I F N+ HL+N++RP QA L +L+ Q RK+ E++K ++A L+ EA
Sbjct: 19 YLQNPKSAPEPPPPI---ERTYVCFGANYTTDYVLPSLEEQGVRRLY-PNGPNVDFKKELRSLNRELQLHLLELADVLI-----ERPSQ-YARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKEA 161
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A834H255_RHOSS (Mediator of RNA polymerase II transcription subunit 7 n=3 Tax=Ericales TaxID=41945 RepID=A0A834H255_RHOSS) HSP 1 Score: 75.1 bits (183), Expect = 4.810e-13 Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = 0
Query: 21 YYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
Y Q+ + P PPP+ +Y +FG Y+T+ +LPSLE+ G +++Y P+ P D ELR LN L L+L + E P Q + ++ I F N+ HL+N++RP Q L LL++Q RK+ E++K ++A L+ EA
Sbjct: 20 YIQNPNSAPEPPPPI---EGTYVLFGANYTTDDVLPSLEEQGVRQLY-PTGPNIDFKNELRSLNRDLQLHILELA-----DVLVERPSQ-YARRVEDISLIFKNLHHLLNSLRPHQGRATLIHLLESQIQRRKQAVEDIKRRREEAQKLLKEA 162
BLAST of Gcaud1866.t1 vs. uniprot
Match: UPI00098E7AF2 (mediator of RNA polymerase II transcription subunit 7a-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E7AF2) HSP 1 Score: 74.7 bits (182), Expect = 7.590e-13 Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 0
Query: 21 YYQSIATQPMHPPPLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
Y Q ++ P PPP+ + +Y +FG Y+T+ +LPSLE G +++Y P P D ELR LN L L+L + E P Q + +++I F N+ HL+N++RP QA L +L++Q RK E++K ++A L+ E+
Sbjct: 23 YLQDPSSAPDPPPPV---DGAYPLFGATYTTDVVLPSLEDQGVRQLY-PKGPTIDFKKELRALNRELQLHILELA-----DVLVERPSQ-YARRVEEISLIFKNLHHLLNSLRPHQARATLIHILESQIQRRKEAVEDIKRRREEAQKLLKES 165
BLAST of Gcaud1866.t1 vs. uniprot
Match: A0A0D9XP47_9ORYZ (Purple acid phosphatase n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XP47_9ORYZ) HSP 1 Score: 78.2 bits (191), Expect = 9.870e-13 Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 0
Query: 20 RYYQSIATQPMHPP-PLPSSNDSYQMFGRLYSTEHILPSLEQSGRKRVYDPSAPPCD---ELRKLNASLLQLFLKLVAQLCHPITQESPVQPHKDIIQQIEDTFVNMQHLINTMRPAQAAMDLKTLLDNQTASRKRTTENLKESVKKAWDLIAEA 170
R Y+ P P P P + YQ+FG Y+TE +LPSLE G +++Y P +P D ELR LN L L+L I E P Q + ++ I F N+ HL+N++RP QA L +L+NQ RK E++K+ ++A L+ E+
Sbjct: 729 RLYKDYEKDPSSAPDPPPPVDGPYQLFGATYTTEVVLPSLEDQGVRQLY-PKSPNIDFKKELRTLNRELQLHILELA-----DILVERPSQ-YARRVEDISLIFKNLHHLLNSLRPHQARATLIHMLENQIRRRKEAIEDIKQRREEAQKLLGES 876 The following BLAST results are available for this feature:
BLAST of Gcaud1866.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1866.t1 ID=Gcaud1866.t1|Name=Gcaud1866.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=260bpback to top |