Gcaud9965.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9965.t1
Unique NameGcaud9965.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length253
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9965.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..250
NoneNo IPR availableTMHMMTMhelixcoord: 231..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1884_length_7894_cov_4.416378contigNODE_1884_length_7894_cov_4.416378:4301..5097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9965.t1Gcaud9965.t1Gracilaria caudata M_176_S67 malemRNANODE_1884_length_7894_cov_4.416378 4301..5097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9965.t1 ID=Gcaud9965.t1|Name=Gcaud9965.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=253bp
MEPKTVKRANDSDSFVCSYPRIGGLYRDCHTEIFRNEERDVTEPPPDDDG
RTFIARLGKDGTWETRGDRRNVPLLNGADARQMERVSFSELIAEFDELRK
KGRVDEFRVLGSDLKSSGKTKLTVFWKRIQKNYLAPEQDRFAIATDENSF
LIRRPSTVSINDILLAISTVLSGVMESFKLFSGVKKDLENRKAVKEREIR
GVNSDGFTNNDEGEKRDGEGALFLVKPFAKVIGLMALTVAELVPLWFLFI
NY*
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