Gcaud7742.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7742.t1
Unique Name	Gcaud7742.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	395

Homology

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BLAST of Gcaud7742.t1 vs. uniprot
Match: A0A2V3IYD3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD3_9FLOR)

HSP 1 Score: 640 bits (1651), Expect = 1.570e-229
Identity = 318/398 (79.90%), Postives = 351/398 (88.19%), Query Frame = 0

Query:    1 MRVASPERLQTCVQNFLLGINVLPRWIDAAASSSDRPGRGHYEWGNWSDELRSLHMWTFGAPWRTVIADIRLAHLVTSVSELHKLKDQIVWEIVEQTYIQAERRRQSTVPEDTVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARLLFTTSPIPQWQPESTVPTLTPAQFGTQATHMELEMIQNDFLPFYARVPQLEDEHVLRARRFAQQFCQNVTPPQVVMDTDVRETRGMPREDKAVDFMTPWLQSMDTEQNEQRWQTLTHAIINERPVVADFELFKGEVCRAIVSQLLLQLTQSPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTLRGALEERIRRYESGYREGLQPPLVDP----RFHQGGASSSGPPERGIG 394
            MRVASP+ LQTCVQNFL  I+VLPRWIDAA SS+DRPGRGHYEWGNWSDELRSL MW FG PWRT+IADIRLA LVTS+S+LHKLKDQIVWEIVEQTYI+AER+R S+VP+DTVKTRIRSV+SWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARLLFT+SPIPQWQPE+TVP+LTPAQFGT+A+ ME +MI+N +LPFYARVP L D HVLRAR  AQQFC +VTPP+VVMDTDVRETRGMPREDKAVDFMTPWL+SMD  +NEQRW  L  A+++E   V DFELFKGEVCRAIVS LLLQLT S AVD+SYVYD+A+VTAV+QSEKEL+V SRLPGQKKKR VSRRTLRGALEER+RRY+S YRE L PP        R H GGASSSGP ERGIG
Sbjct:    1 MRVASPQSLQTCVQNFLQSIHVLPRWIDAA-SSTDRPGRGHYEWGNWSDELRSLTMWIFGGPWRTIIADIRLAKLVTSISDLHKLKDQIVWEIVEQTYIRAERQRNSSVPDDTVKTRIRSVFSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARLLFTSSPIPQWQPETTVPSLTPAQFGTEASRMEAQMIENGYLPFYARVPHLSDTHVLRARALAQQFCHSVTPPEVVMDTDVRETRGMPREDKAVDFMTPWLESMDAPENEQRWDALVRAVVSETHSVGDFELFKGEVCRAIVSLLLLQLTHSSAVDASYVYDIASVTAVEQSEKELVVSSRLPGQKKKRTVSRRTLRGALEERLRRYQSAYREALHPPXXXXXXXXRIHPGGASSSGPSERGIG 397

[Close]

BLAST of Gcaud7742.t1 vs. uniprot
Match: R7QNW8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNW8_CHOCR)

HSP 1 Score: 375 bits (964), Expect = 3.550e-126
Identity = 189/307 (61.56%), Postives = 230/307 (74.92%), Query Frame = 0

Query:   56 MWTFGAPWRTVIADIRLAHLVTSVSELHKLKDQIVWEIVEQTYIQAERRRQSTVPEDTVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARLLFTTSPIPQWQPESTVPTLTPAQFGTQATHMELEMIQNDFLPFYARVPQLEDEHVLRARRFAQQFCQNVTPPQVVMDTDVRETRGMPREDKAVDFMTPWLQSMDTEQNEQRWQTLTHAIINERPVVADFELFKGEVCRAIVSQLLLQLTQSPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTLRGALEERIRRYE 362
            MW  G PWRT+IAD++ A L++SVS  HKLKDQ+VWEIVEQTY +AERRR+ST  +DTVKTRIRSV+SWQRRHDVKK+SLMWFLDFAFVL+AYSEFQA  LF+ S IPQ  P   VP L PAQFGT +  ME EM  + FLPFY +VP L D+ V  AR  A QFC N+  P V MD DVRETRGMPRE+KAVDFMTPWLQ M + ++   W +L   I+ E+  ++D E+FK E+CR+IV  LL ++T+    ++ YVYD+A  TAV+QSEKELLV  R  GQK+KR VSRRTLR  L+++I  YE
Sbjct:    1 MWVLGGPWRTIIADVKTARLLSSVSGFHKLKDQVVWEIVEQTYQRAERRRRSTAEKDTVKTRIRSVFSWQRRHDVKKHSLMWFLDFAFVLSAYSEFQAHFLFSDSTIPQNDPARMVPLLAPAQFGTHSNRMEQEMFNHGFLPFYCKVPGLTDKEVSMARTLASQFCYNLDRPIVDMDVDVRETRGMPREEKAVDFMTPWLQMMSSREHASVWTSLVMRILEEKNTLSDLEIFKSELCRSIVIVLLSEMTKPDHREAGYVYDIAGSTAVEQSEKELLVSLRTAGQKRKRTVSRRTLRSDLDQQIMAYE 307

The following BLAST results are available for this feature:

BLAST of Gcaud7742.t1 vs. uniprot

BLAST of Gcaud7742.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IYD3_9FLOR	1.570e-229	79.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QNW8_CHOCR	3.550e-126	61.56	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..394
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 158..394
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 135..157
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1881_length_7908_cov_4.074965	contig	NODE_1881_length_7908_cov_4.074965:6241..7425 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7742.t1	Gcaud7742.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1881_length_7908_cov_4.074965 6241..7425 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7742.t1 ID=Gcaud7742.t1|Name=Gcaud7742.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=395bp
MRVASPERLQTCVQNFLLGINVLPRWIDAAASSSDRPGRGHYEWGNWSDE
LRSLHMWTFGAPWRTVIADIRLAHLVTSVSELHKLKDQIVWEIVEQTYIQ
AERRRQSTVPEDTVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSE
FQARLLFTTSPIPQWQPESTVPTLTPAQFGTQATHMELEMIQNDFLPFYA
RVPQLEDEHVLRARRFAQQFCQNVTPPQVVMDTDVRETRGMPREDKAVDF
MTPWLQSMDTEQNEQRWQTLTHAIINERPVVADFELFKGEVCRAIVSQLL
LQLTQSPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTL
RGALEERIRRYESGYREGLQPPLVDPRFHQGGASSSGPPERGIG*