Gcaud7565.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7565.t1
Unique NameGcaud7565.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length481
Homology
BLAST of Gcaud7565.t1 vs. uniprot
Match: A0A2V3J4J5_9FLOR (Transcription initiation factor TFIID subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4J5_9FLOR)

HSP 1 Score: 819 bits (2115), Expect = 3.770e-283
Identity = 386/480 (80.42%), Postives = 442/480 (92.08%), Query Frame = 0
Query:    1 MVTSTKPDKTRPPVFHPVELARGWRILRQHLTLHVDVRKRTLTGSAHFTFCALNVHFVSLCLNLRRCRINSCEIAAKPAPYRLISPLDDDQLLDAVASQTSRPRVVDVDFSMRQRQKAASEQGELVIDLPVSVTADLIDDLKELISETSPQKINPDEVDLESNTAPPVALDRLPIVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQLRNEPSLDLADSNLDQITDSSRATIRKRSHMIV 480
            MVTSTK +K RPPVFHPVELARGWRILRQHL LHVD++KRTLTG+A FTFCALN+HFVS+CLNLRRCR+NSC IA KPAPYRLISPLDD +LL   +SQTSR R++D+D+SM+QRQ+AA+EQGELVIDLPVSVTADLID+ KEL++E S +K+ P+EVDLE+N APPV LD+LP+VHLKL+YEVLDP AGAMFYGN + +K VLDP+YMLTESRFGMARFWMPC+D+INWYDRCLFDLDVVVD+HLFAVASGEL+ETIAL PEASP+E PAKL++YSLYAPALASEI+LAVGPFIPLPDPT+PHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPI S+KQIFVGSLGL+P +T++GAGGIVVLSGDLLH+ R ID+AF AREAIMNGVVM+Y GRFLRPR LEDDWLI+GLAAHV+ALG+QTILGRNWY FRIW+ ME LR EPSLDLA+ N+D++ +SS A +RKRSHMIV
Sbjct:    1 MVTSTKSEKVRPPVFHPVELARGWRILRQHLKLHVDLQKRTLTGTAVFTFCALNIHFVSVCLNLRRCRVNSCLIAHKPAPYRLISPLDDHELLSVASSQTSRSRIIDLDYSMQQRQQAANEQGELVIDLPVSVTADLIDEFKELVAEASSEKVKPEEVDLEANVAPPVPLDKLPLVHLKLEYEVLDPLAGAMFYGNTKAEKPVLDPVYMLTESRFGMARFWMPCIDSINWYDRCLFDLDVVVDTHLFAVASGELNETIALTPEASPSEKPAKLFRYSLYAPALASEIVLAVGPFIPLPDPTIPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPISSYKQIFVGSLGLDPSSTVSGAGGIVVLSGDLLHSSRSIDDAFAAREAIMNGVVMSYFGRFLRPRTLEDDWLISGLAAHVSALGLQTILGRNWYIFRIWDTMESLRKEPSLDLANPNVDRVIESSLAALRKRSHMIV 480          
BLAST of Gcaud7565.t1 vs. uniprot
Match: R7Q414_CHOCR (Transcription initiation factor TFIID subunit 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q414_CHOCR)

HSP 1 Score: 585 bits (1508), Expect = 2.220e-192
Identity = 274/488 (56.15%), Postives = 367/488 (75.20%), Query Frame = 0
Query:    1 MVTSTKPDKTRPPVFHPVELARGWRILRQHLTLHVDVRKRTLTGSAHFTFCALNVHFVSLCLNLRRCRINSCEIAAKPAPYRLISPLDDDQLLDAVASQTSRPRVVDVDFSMRQRQKAASEQGELVIDLPVSVTADLIDDLKELISETSPQKINPDEVDLESN-----TAPPVALDRLPIVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETI---ALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQLRNEPSLDLADSNLDQITDSSRATIRKRSHMIV 480
            MV S K DK++PPVFH +ELARGWRI+R+H+ L +D+ +RT+ G+A F FCAL+  FV++ LNLRRCR+ SC I  KPA +R++SPLDDD+LL AV+S T+R RV +++ S+R R+ A++ QGELV+DLP +++AD+ID+L E   + SP      + DL  N       P + L+ LP++ L++DYE  +P+AGA+++GN      V+DP+YMLT+SRFGMARFWMPC+D++ W DR LFD D+ V S L  +ASGEL ET+   A      PT+ P K++KY L APA ASE+++AVG F+PLPDP +  ++T+FCLPG A+ELVHT PPL AK+LAFCRDYFGADPP  SFK +FVGSLG    TT TGAGG+VV SGD+LH  R IDEAF+AREA+M+G+VM+Y GRFLRPR  EDDWLI GLAAHV  LG+  ILGRNWY FRI ++M+ LR E S+DL+D  ++++TD +  ++++RSH+IV
Sbjct:    1 MVASAKTDKSKPPVFHQLELARGWRIIREHVKLRIDLDRRTIAGTAKFEFCALSNQFVNIALNLRRCRVTSCLINDKPASFRIVSPLDDDKLLAAVSSDTARHRVANIEHSVRLREDASAIQGELVVDLPAAISADIIDELTEAFQKASP------DADLIQNPPEFTAVPALPLEHLPVLTLRIDYEAYEPSAGAVYFGNQDASNPVIDPVYMLTDSRFGMARFWMPCIDSMQWCDRYLFDFDIAVKSSLLVIASGELTETVIYTAGNDSEFPTDDPIKVFKYRLLAPAHASEVVIAVGDFVPLPDPALSKTVTYFCLPGLARELVHTCPPLFAKALAFCRDYFGADPPTSSFKHVFVGSLGRNAGTTTTGAGGVVVYSGDILHDSRSIDEAFIAREAVMSGLVMSYFGRFLRPRQAEDDWLICGLAAHVTTLGLGAILGRNWYRFRIMDLMDMLRQEKSVDLSDVKINRVTDETLDSVKRRSHVIV 482          
BLAST of Gcaud7565.t1 vs. uniprot
Match: UPI000D7277B9 (LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D7277B9)

HSP 1 Score: 140 bits (354), Expect = 5.660e-32
Identity = 112/436 (25.69%), Postives = 186/436 (42.66%), Query Frame = 0
Query:   19 ELARGWRILRQHLTLH-VDVRKRTLTGSAHFTFCALNVHFVSLCLNLRRCRINSCEIAAK-PAPYRLISPLDDDQLLDAVASQTSRPRVVDVDFSMRQRQKAA----SEQGELVIDLPVSVTADLIDDLKELISETSPQKINPDEVDLESNTAPPVALDRLPIVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQL 448
            EL R +++  Q L +  ++  +++L G    T   L      + +N ++CRI    I  +  A ++   P  +      +    ++ R +D   S       A    S  GEL IDLPV  T  LI++L+                                   + +++ +  P  G  F     +        +M T  +   +R W PC+DT +  + C + L+  VD+ + AV+ G+L +T+  P      +   K Y Y L  P  A  I LAVGPF  L DP + H +THFCLP     L HT    L +S  F  +   +  P   +KQ+FV    ++     T    + +LS +LLH+ R ID+  + R  +   V   + G F+  +   D WL  G+A +++ L  +   G N Y + I  I++++
Sbjct:    8 ELTRPFKLAHQTLCIKAINFERQSLIGYVELTVHPLRPDLKQVKINSKQCRIYQIVINEQWEASFQYNDPTQE------ICQGDAKQRNLDYYQSSHLAAMTAVDPDSGNGELTIDLPVE-TGPLINELRPF--------------------------------RMVIEFSLEQPKGGIHFVIPDLEGSMAERGAHMFTCGKENSSRLWFPCVDTYS--EPCTWKLEFTVDNSMIAVSCGDLIDTVHTP------DLRRKTYHYFLSTPTSAPNIALAVGPFETLVDPNM-HEVTHFCLPHLMSVLKHTTS-YLHQSFEFYEELMSSRYPYGCYKQVFVDESYVDGAAYAT----MSILSTNLLHSARIIDQTLITRRIMARLVAEQFFGCFISMQSWADAWLTKGIAGYLSCLFQKKTFGNNEYRYMIAQILKEV 390          
BLAST of Gcaud7565.t1 vs. uniprot
Match: F4PNV5_CAVFA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PNV5_CAVFA)

HSP 1 Score: 131 bits (329), Expect = 1.010e-28
Identity = 118/499 (23.65%), Postives = 212/499 (42.48%), Query Frame = 0
Query:   19 ELARGWRILRQHLTLHVDVRKRTLTGSAHFTFCALNVHFVSLCLNLRRCRINSCE-IAAKPAPYRLISPLDDDQLLDAVASQTSRPRVVDVDFSMRQRQKA--ASEQGELVIDLPVSVT------------------------------ADLIDDLKELISETSPQKINPDEVDLESNTAPPVALDRLPIVHLKLDYEVLDPT-AGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIW---NIMEQLRNEPSLDLADSNLDQITDSSRATIRKRSHMIV 480
            +L RG+++  Q L L +D+ ++TL G     +  L +   +  L   R R+NS + I  K     + +       L+ V        V D+D      + A  AS++GELVID+P SVT                                             P                   +   P++ +++ Y V+    +  + + N  ++ Q L   +M T S+   AR W PC D IN  ++C ++L++   + L  VA+G L E ++   E   T      + Y    P  A+ I   VGPF   PDP +  S+THFCLP  A +L H+     + +  F  +Y G   P  S+KQ+F+   G     T++      + +  LLH P  ID+ F  R  I++ +   +   ++  R   D WL  GL+ H++ + ++ + G N + +RI    + +  + N     + + ++   T+++   I++++ +++
Sbjct:   57 KLKRGFKLSHQKLVLDIDLDRQTLDG-----YTELIIQPQTRKLRQDRIRLNSRQNIVTKVLVNNVETTFTLSNYLECVVGNQD---VKDLDTYQAYLKAAIHASDEGELVIDIPSSVTFYESNQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIIPXXXXXXXXXXXXXXXXSRHIQFSPLI-VRIYYHVISTNNSSTLKFINPDKKLQPLRRAHMYTTSQVDGARMWFPCCDQIN--EKCTWELELTAKAGLVVVATGTLLEKVSSNDEKKHT------FIYRQEVPTCAAGIGCCVGPFEIYPDPHI-RSVTHFCLPHRASDLHHSVA-FFSHAFRFFEEYLGTSFPYSSYKQVFIDDNGKSSFATLS------IFNSHLLHPPPIIDQTFETRTQIVDQLARQWFFWYIGARHWSDMWLSYGLSTHLSNVFLKKMFGNNDHRYRISKEEDFVGTVDNGSQPPICNDHIMMPTEATTDLIQRKAPLVI 530          
BLAST of Gcaud7565.t1 vs. uniprot
Match: A0A8B7YH32_ACAPL (Transcription initiation factor TFIID subunit 2 n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B7YH32_ACAPL)

HSP 1 Score: 130 bits (327), Expect = 1.630e-28
Identity = 81/274 (29.56%), Postives = 131/274 (47.81%), Query Frame = 0
Query:  175 IVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQL 448
            ++ + +++ +  P  G  F     +        +M T S    +R W PC+DT +  + C + L+  VD  + AVASG+L ET+  P      +   K + Y L  P  A  I LAVGPF  L DP +P  +THFCLP   K L+  +   L ++  F  +  G   P  ++KQ+FV     +  +  T    + +LS +LLH+ R ID+ F  R  +   +   + G F+  +   D WL  G++ ++  L ++ + G N Y + I   M  L
Sbjct:  136 MLRVSIEFSLERPQGGLHFVVPDMEGSMAERAAHMFTHSHENSSRAWFPCVDTYS--EPCTWKLEFTVDKSMTAVASGDLMETVYTP------DMRKKTFHYVLNQPTSAPNIALAVGPFEILVDPVMP-EVTHFCLPQL-KPLLEHSTAFLHEAFDFFEECLGTRFPYSNYKQVFVDEAYKDYSSFAT----LSILSTNLLHSQRIIDQTFTTRRLMAQSLSEQFFGCFVGSQSWSDLWLPKGISKYLTGLLLKRMFGVNEYRYHIHKEMTSL 395          
BLAST of Gcaud7565.t1 vs. uniprot
Match: UPI0006447E38 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447E38)

HSP 1 Score: 129 bits (323), Expect = 5.960e-28
Identity = 78/264 (29.55%), Postives = 131/264 (49.62%), Query Frame = 0
Query:  178 LKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRI 441
            +K+ Y+++ P  G +F     +        Y  T S+    R W+PC D +   ++C ++LD+   S L  V+SG+L E +A   E   T      + Y    P  A  I  AVGPF   PDP + + + HFCLP    ++ H+    L+ +  F  +Y G+  P  S+KQ+FV  L   PD+  +    + VLS  LLH+PR ID+ F  R  + + +   +   ++  +   D W+  GL+ H+A++ ++   G N Y +++
Sbjct:  393 VKVHYKLVSPKGGLVFVPADSEVPNRRAHCY--TMSQPDSTRMWLPCCDLLG--EKCTWELDLTTSSDLVVVSSGQLLEKVATDDETRNT------FHYRQDIPTCAPAIGFAVGPFEIYPDPVL-NGVNHFCLPHRLSDMKHSVH-FLSTAYKFYEEYLGSQFPYSSYKQVFVDDL---PDSQ-SSYSTLAVLSAQLLHSPRIIDQTFDTRTIMASQLAEQWFRWYIGAKTWMDIWMSQGLSGHLASMFIKKTFGINHYRYQL 640          
BLAST of Gcaud7565.t1 vs. uniprot
Match: K1PN07_CRAGI (Transcription initiation factor TFIID subunit 2 n=5 Tax=Crassostrea TaxID=6564 RepID=K1PN07_CRAGI)

HSP 1 Score: 128 bits (322), Expect = 7.160e-28
Identity = 104/434 (23.96%), Postives = 183/434 (42.17%), Query Frame = 0
Query:   19 ELARGWRILRQHLTLH-VDVRKRTLTGSAHFTFCALNVHFVSLCLNLRRCRINSCEIAAK-PAPYRLISPLDDDQLLDAVASQTSRPRVVDVDFSMRQRQKAASEQGELVIDLPVSVTADLIDDLKELISETSPQKINPDEVDLESNTAPPVALDRLPIVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQLRN 450
            +++R +++  Q L +  +++ K++L G        L      + +N ++CRI    I  +  A +    P  +  +    A Q +        FS        +  GE+ + LP  +  +        I+E  P +                         L +++ + +P  G  F           +  ++ T      +R W PCLDT +  + C + ++V VD+ L AV  G+L E I+ P +        K + Y L  P  A  I +AVGPF    DP + H +THFCLP   + L HT    + ++  F  +   +  P   +K +FV    +E  +  T    + VLS +LLH+ R ID+    R  +   V   + G F+  +   D WL  G++ ++  L ++   G N Y FRI N ++ +++
Sbjct:    8 DVSRPYKLAHQTLCIRAINLEKKSLIGYVELVIHPLRQDLKRVKINSKQCRIYHVSINDQYEAKFLYNDPTLE--ICQGDAKQRNLDYFQHCHFSAMSAVDPDNGNGEITVRLPPEMYLN--------IAELRPFR-------------------------LCIEFSLENPKGGLHFVVPDLPGPAHENAAHVFTAGLNNCSRLWFPCLDTYS--EPCTWKIEVTVDNELTAVTCGDLIEVISTPDKKR------KTFHYFLSIPTSAPNIGMAVGPFEIHVDPNM-HEVTHFCLPHLTEILKHTTN-YIHQAFEFYEELLSSRYPYTCYKHVFVDEAYVESTSYAT----MSVLSTNLLHSNRIIDQTISTRTVLAEAVAKQFFGTFIAMQTWSDAWLPMGISGYLCGLFIKKTFGNNEYRFRISNYLKDVQD 392          
BLAST of Gcaud7565.t1 vs. uniprot
Match: UPI001455B656 (transcription initiation factor TFIID subunit 2-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001455B656)

HSP 1 Score: 125 bits (313), Expect = 9.900e-27
Identity = 76/267 (28.46%), Postives = 128/267 (47.94%), Query Frame = 0
Query:  175 IVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRI 441
            ++ + +++ +  P  G  F     +        +M T S    +R W PC+DT +  + C + L+  VD  + AVASG+L ET+         +   K + Y L  P  A  I  AVGP+  L DP +P  +THFCLP   K L+  +   L ++  +  +  G   P  ++KQ+FV     +  +  T    + +LS +LLH+ R ID+ F+ R  +   +   Y G F+  +   D WL  G++ ++  L ++ + G N Y + I
Sbjct:  136 MLQVSIEFSLERPQGGIHFVVPDTEGSMAERAAHMFTYSHDNSSRAWFPCIDTYS--EPCTWKLEFTVDKAMTAVASGDLVETVYT------LDMRKKTFHYMLNVPTSAPNIAFAVGPYEILVDPVMP-EVTHFCLPQL-KPLLEHSTAFLHEAFDYFEECLGTRYPYSNYKQVFVDEAYRDYSSFAT----LSILSTNLLHSSRIIDQTFMTRRFMAQSLAEQYFGCFVSSQSWSDLWLPKGISKYLTGLLLKRMFGVNEYRYHI 388          
BLAST of Gcaud7565.t1 vs. uniprot
Match: M2W5A2_GALSU (Transcription initiation factor TFIID subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5A2_GALSU)

HSP 1 Score: 117 bits (293), Expect = 3.420e-24
Identity = 90/302 (29.80%), Postives = 135/302 (44.70%), Query Frame = 0
Query:  157 EVDLESNTAPPVALDRLP-------IVHLKLDYEVLDPTAGAMFYGNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFG-ADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGR--FLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQL 448
            E DL    +PP + D L        + ++++ Y +    A  +F       +Q     Y+  +  F  A  W+PC+D  N  +R  F L + V + LFAVASG++ +TI    E S       +  Y      L   +   VGPF  LPDP  P SIT+F LPG  K L +T    L+K +   +  F     P  SFK +F+G          + AGG+ ++ GD L+    ID+ F  R  ++N     Y G    L P+  +D WLI GL   +    ++ + G NW   R   + + L
Sbjct:  125 EQDLTKEASPPSSNDTLDKSGHQNTVYNIQVTYLLSGSNASVLF-------RQFDSHSYVYIDGFFTGAYHWIPCVD--NLCNRYTFTLIISVATDLFAVASGDVEDTILSDDETS-------VAYYYRVGNTLPCNVSFIVGPFKVLPDPVYPASITYFALPGNTKWLANTTR-FLSKLVPKMQSVFPQVGFPFSSFKIVFLGKGDGRHGQGQSFAGGLCLVPGDWLYGEDIIDQVFYTRPKLVNLFCSLYIGDNGLLGPQTAKDIWLIHGLQQFLGMHLLKDLFGNNWCKTRYLELAQYL 409          
BLAST of Gcaud7565.t1 vs. uniprot
Match: A0A4Z2D6C2_SCHJA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2D6C2_SCHJA)

HSP 1 Score: 112 bits (280), Expect = 1.500e-22
Identity = 86/337 (25.52%), Postives = 150/337 (44.51%), Query Frame = 0
Query:  167 PVALDRLPIVHLKLDYEVLDPTAGAMFY-----GNLQQQKQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVASGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDPTVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIFVGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTYSGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIME-----------------QLRNEPS-LDLADSNLDQITDSSRATIRKRSHMIV 480
            P+   + P + + +++ +  P +G  F      G+L ++      ++  T      +R W PC+D     + C + ++V V   L AVA GEL +      + +      K Y + +  P  A  I LAVG F   PDP + +  THFC       L HT  PL ++ + +      +  P  + K +FV     +          +++LS DLLH+PR ID+A   R+ +   V   + G FL      D WL  GLA +++ L  + + G N Y   +++ M                  +L ++P+  DL+ S+L  I+    +  +K+SH+++
Sbjct:  173 PLVSQKFPFI-ITIEFSLNKPKSGFYFVVPEGEGSLSERG-----VHAFTACTPNCSRLWFPCIDCS---EPCTWKIEVTVFEDLVAVAPGELIDAPYYTEDLTH-----KTYHFFVSQPVAAPYIGLAVGAFEIFPDPRLSNGATHFCPSELLPLLQHTISPL-SEIIEYYESILASQYPFSTIKCVFVDCAFSK----FQSFASLIILSVDLLHSPRVIDQAIETRKVLSLAVAHQFFGCFLIMETWCDAWLTFGLAGYLSGLYQKRVFGNNEYRKMVFDEMHFVSKFENMRYGVVLDPSKLTSKPTYFDLSSSHL--ISPDYLSAYKKKSHLVI 488          
The following BLAST results are available for this feature:
BLAST of Gcaud7565.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3J4J5_9FLOR3.770e-28380.42Transcription initiation factor TFIID subunit 2 n=... [more]
R7Q414_CHOCR2.220e-19256.15Transcription initiation factor TFIID subunit 2 n=... [more]
UPI000D7277B95.660e-3225.69LOW QUALITY PROTEIN: transcription initiation fact... [more]
F4PNV5_CAVFA1.010e-2823.65Transcription initiation factor TFIID subunit 2 n=... [more]
A0A8B7YH32_ACAPL1.630e-2829.56Transcription initiation factor TFIID subunit 2 n=... [more]
UPI0006447E385.960e-2829.55hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
K1PN07_CRAGI7.160e-2823.96Transcription initiation factor TFIID subunit 2 n=... [more]
UPI001455B6569.900e-2728.46transcription initiation factor TFIID subunit 2-li... [more]
M2W5A2_GALSU3.420e-2429.80Transcription initiation factor TFIID subunit 2 n=... [more]
A0A4Z2D6C2_SCHJA1.500e-2225.52Transcription initiation factor TFIID subunit 2 n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042097Aminopeptidase N-like , N-terminal domain superfamliyGENE3D2.60.40.1730tricorn interacting facor f3 domaincoord: 25..292
e-value: 1.2E-15
score: 60.2
IPR042097Aminopeptidase N-like , N-terminal domain superfamliySUPERFAMILY63737Leukotriene A4 hydrolase N-terminal domaincoord: 16..263
IPR037813Transcription initiation factor TFIID subunit 2PANTHERPTHR15137TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 24..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1858_length_8045_cov_4.168972contigNODE_1858_length_8045_cov_4.168972:5281..6723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7565.t1Gcaud7565.t1Gracilaria caudata M_176_S67 malemRNANODE_1858_length_8045_cov_4.168972 5281..6723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7565.t1 ID=Gcaud7565.t1|Name=Gcaud7565.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=481bp
MVTSTKPDKTRPPVFHPVELARGWRILRQHLTLHVDVRKRTLTGSAHFTF
CALNVHFVSLCLNLRRCRINSCEIAAKPAPYRLISPLDDDQLLDAVASQT
SRPRVVDVDFSMRQRQKAASEQGELVIDLPVSVTADLIDDLKELISETSP
QKINPDEVDLESNTAPPVALDRLPIVHLKLDYEVLDPTAGAMFYGNLQQQ
KQVLDPLYMLTESRFGMARFWMPCLDTINWYDRCLFDLDVVVDSHLFAVA
SGELHETIALPPEASPTEAPAKLYKYSLYAPALASEIILAVGPFIPLPDP
TVPHSITHFCLPGFAKELVHTAPPLLAKSLAFCRDYFGADPPICSFKQIF
VGSLGLEPDTTITGAGGIVVLSGDLLHTPRCIDEAFVAREAIMNGVVMTY
SGRFLRPRLLEDDWLITGLAAHVAALGMQTILGRNWYTFRIWNIMEQLRN
EPSLDLADSNLDQITDSSRATIRKRSHMIV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042097Aminopeptidase_N-like_N_sf
IPR037813TAF2