Gcaud7794.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7794.t1
Unique NameGcaud7794.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length259
Homology
BLAST of Gcaud7794.t1 vs. uniprot
Match: A0A2V3J4L9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L9_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 5.980e-53
Identity = 100/232 (43.10%), Postives = 148/232 (63.79%), Query Frame = 0
Query:   29 KGGCTSVFKWLYEGIIG-ERHTSEKCHANPPNIRDSCWNSQAVYVRNFSTSEQRRILTSPSTLRLAVQREAFDRLISAFNDKFACITEQYNVGLIH-SPIVPYTRKLAALPESPRMCMNISEFALALDRIRE----NRNIS-------LQRIDIHIRPQQLYFDHIPHHIVVDVSHMRNRSVLQPVIDRLPFGASMKEGVGRHNSVARRRTPLLIPQDAAKSLHRFALESTI 247
            KGG TS+F+ ++ G+ G  R++ ++C +   N+   CWN+QA Y+ N S   +R++LT  +TLR+A+QR  +DRL+SAF  KF C T  Y   + +   +VP  R+ AALP +   CMNISEFA ALDR R+    NR +        L+++DIHIRPQQ +F++I +HIV+DV  + N + L P++ RLPF   + +GV + +  A +   LL+P+ AA  LHRFALES +
Sbjct:   64 KGGSTSLFQCIFAGVTGVPRYSVKQCGSYVHNVHSPCWNNQATYLYNLSLPHRRKVLTGATTLRVAIQRNPYDRLLSAFKSKFTCNTTLYGTDVRNRESMVPTLRRQAALPLTQPNCMNISEFAEALDRCRQIVTSNRTLPFASKLKHLRKLDIHIRPQQFFFEYISYHIVLDVDDLSNVTNLTPLLRRLPFVDLVSDGVRQEH--ASKSYNLLVPELAAGQLHRFALESKV 293          
BLAST of Gcaud7794.t1 vs. uniprot
Match: A0A2V3ISN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN0_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 2.780e-27
Identity = 70/232 (30.17%), Postives = 117/232 (50.43%), Query Frame = 0
Query:   29 KGGCTSVFKWLYEGIIGERHTSEKCHANPPNIRDSCWNSQAVYVRNFSTSEQRRILTSPSTLRLAVQREAFDRLISAFNDKFACITEQYNVGLIHS-PIVPYTRKLAALPESPRMCMNISEFALALDRIR---ENRNISLQRIDIHIRPQQLYFDHIPHHIVVDVSHMRNRSVLQPVIDRLPFGASMKEGVGRHNSVARRRTPLLIPQDAAKSLHRFA-LESTIAEPRHLLP 255
            K   T+++ WL+  I+G R  +        +    CW  + ++  N S  ++  +L S S LR+A+ R+ F RL+SA+  K AC +  +   +      VP   + A +  +   C++++ FA  LDR+R   E     L+ ++IH RPQ  YF  I + I++D+SH+ N SV  P++ RL F A   +   + ++ ++R     IP+  A  L +FA L      PR L P
Sbjct:  133 KVASTALWTWLHPAIVGHRSQNPCNTTYIQHFAHPCWQGKPIHPSNLSRHQKYSLLKSASVLRVAITRDPFQRLLSAWKSKVACDSHDFGTDVQDRVKFVPRLLRQAGMNRTQDQCLSLAGFAQVLDRLRIKAEQNRFDLRTLNIHFRPQLSYFSVIDYDIIMDISHVSNASVFAPILRRLQFPALADDQPAKMHASSQRLQA--IPETTAVQLFKFARLTENFPPPRFLHP 362          
BLAST of Gcaud7794.t1 vs. uniprot
Match: R7QUW9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUW9_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 1.690e-26
Identity = 63/219 (28.77%), Postives = 119/219 (54.34%), Query Frame = 0
Query:   29 KGGCTSVFKWLYEGIIGERHTSEKCHANPPNIRDSCWNSQAVYVRNFSTSEQRRILTSPSTLRLAVQREAFDRLISAFNDKFACITEQYNVGLIHSP-IVPYTRKLAALPESPRMCMNISEFALALDRIR---ENRNISLQRIDIHIRPQQLYFDHIPHHIVVDVSHMRNRSVLQPVIDRLPFGASMKEGVGRHNSVARRRTPLLIPQDAAKSLHRFAL 243
            K G T+++ WL++G+ G+    E   +   N +  CW  + ++  N +  E+ +IL  P  LR+A+ R  F+R++SA+  K AC ++ +   +     ++P   + A + +    C++I+ FA  LD++R   E  +  +  +D H RPQ+ +FD I +  ++DVS + N + LQP++ R+PF   + EG  + +S   R     + +  A  L++FA+
Sbjct:  125 KVGSTTLWTWLHKGLSGKSSDKECKGSQVTNFQAPCWQGKVLHPHNMTDLERWKILNDPEVLRIAITRNPFERILSAWKSKAACESDDFGTDVRERDRLIPGMLRQAQMRKGAS-CLSITSFAEVLDKLRRMSERDDFDMTLLDKHFRPQEFHFDIINYQYILDVSMLDNVTALQPIVRRMPFPELLTEGPTKLSS--SRPAYQTLSEPTAALLYKFAI 340          
BLAST of Gcaud7794.t1 vs. uniprot
Match: A0A7S0QSV2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSV2_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 1.480e-14
Identity = 59/258 (22.87%), Postives = 111/258 (43.02%), Query Frame = 0
Query:   29 KGGCTSVFKWLYEGIIGERHT------------SEKCHANPPNIRDSCWNSQAVYVRNFSTSEQRRILTSPSTLRLAVQREAFDRLISAFNDKFACIT------EQYNVGLI-----HSPIVPYTRK-LAALPESP--------------------RMCMNISEFALALDRIRENRNISLQRIDIHIRPQQLYFDHIPHHIVVDVSHMRNRSVLQPVIDRLPFGASMKEGVGRHNSVARRRTPLLIPQDAAKSLHRFA 242
            KGG TS+F W+Y G+ G  H              + C     +  + CW  + ++         +  L + +T ++A+ R+ +DRL+SA+  K AC        E Y  GL+     ++  + +T+   +  P +P                      C+++ ++  ALD IR       + I+ H RPQ  +FD I +   ++++ + +   L+P+ + L F A+  + +   +  A     L +P +  K L +FA
Sbjct:   48 KGGTTSLFNWIYRGMFGREHGLPGDPDPPGVPWDQNCKFGVQHFEEPCWKGRVIHYNQSGVQANKWRLKNAAT-KVAIFRDPYDRLLSAYKSKIACDDGALIDIEGYARGLLGLAGLNTSALAWTKYGPSCRPGNPCEGGLRQEMTNLYGPLWHYGYPCLSMHDYVRALDLIRTKHRA--REINAHFRPQDCFFDQIDYDYHLNITGLSSAQALRPIAESLHFSAANAQPIPIMHQTAPGTVKLWMPPEDQKKLTQFA 302          
The following BLAST results are available for this feature:
BLAST of Gcaud7794.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4L9_9FLOR5.980e-5343.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISN0_9FLOR2.780e-2730.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUW9_CHOCR1.690e-2628.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0QSV2_9CHLO1.480e-1422.87Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 29..188
e-value: 1.0E-5
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1053_length_14587_cov_5.039666contigNODE_1053_length_14587_cov_5.039666:13290..14066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7794.t1Gcaud7794.t1Gracilaria caudata M_176_S67 malemRNANODE_1053_length_14587_cov_5.039666 13290..14066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7794.t1 ID=Gcaud7794.t1|Name=Gcaud7794.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=259bp
MTRCSTKSVTARTLCTSPPQTSCWHPRQKGGCTSVFKWLYEGIIGERHTS
EKCHANPPNIRDSCWNSQAVYVRNFSTSEQRRILTSPSTLRLAVQREAFD
RLISAFNDKFACITEQYNVGLIHSPIVPYTRKLAALPESPRMCMNISEFA
LALDRIRENRNISLQRIDIHIRPQQLYFDHIPHHIVVDVSHMRNRSVLQP
VIDRLPFGASMKEGVGRHNSVARRRTPLLIPQDAAKSLHRFALESTIAEP
RHLLPSLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase