Gcaud7017.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7017.t1
Unique NameGcaud7017.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length857
Homology
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BLAST of Gcaud7017.t1 vs. uniprot
Match: A0A2V3IBB6_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBB6_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 1.650e-61
Identity = 123/236 (52.12%), Postives = 154/236 (65.25%), Query Frame = 0 
Query:  546 MRNRITSAKAELLAADLAPAQP-RRRIIPAALYFAGLKPGPISRYRRALTTAIPGWALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLSELDTVTDARFKDRTLGADENLLRNAHACYNRYKRAVDTPNAAARAWFQQACTVLKERYPDLFSKDGRRRYDRLRDALSERRAARETAPISDATSSTSXXXXXXXXXXXXXXSTDHMT-DDDGFTVVERRKKGDAAASRGTTP 779
            M+ RI  AKA+LL +DLAP  P RR+  P ALYFAG++ GPI RYRRALTTA+PGWAL SISFVGR IGE+LVH  +A R IATMKALGFRHL +LD V D RFKDR L  +EN+LRN HAC+ R+++A  TP  +AR W+  A   L  R+P LF++    +Y  LR  L + R AR   P+SDA+S  S              +TD  T D++GFT V R++K   + S   TP
Sbjct:    1 MQTRIAHAKAKLLHSDLAPVPPPRRQAQPIALYFAGMQRGPIGRYRRALTTALPGWALCSISFVGRQIGELLVHKSLADRAIATMKALGFRHLHQLDPVMDPRFKDRGLTTEENILRNVHACHYRFQQAASTPIPSARKWYLNAAARLTARFPALFTEVQAAQYQELRQRLLKAREARLQPPVSDASSEGSEYDPPSHSSDS---TTDLATVDEEGFTTVTRKRKTPTSPSSTPTP 233
[Close]
BLAST of Gcaud7017.t1 vs. uniprot
Match: A0A2V3INH6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH6_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 2.390e-11
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:  526 KTWAQIAAQRRPNLADLTQEMRNRITSAKAELLAADLAP-----AQPRRRIIPAALYFAGLKPGPISRYRRALTTAIPGWALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLSELD 641
            KTWAQIA  +     +L   M++R+ + K  L  A+LAP     A+P +     A YF  ++ GPI  +RR LT  +PGWA+LS+SF+ R   +I  H      +I +MK  G+ HL++ D
Sbjct:  296 KTWAQIAMAQ-----ELRPAMKDRLRATKEVLRTANLAPTRRIAAKPNK----VAPYFPNVRKGPIGEHRRILTRFLPGWAVLSLSFICRSTADIFTHALSQRPLITSMKLSGYTHLTDYD 407
The following BLAST results are available for this feature:
BLAST of Gcaud7017.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IBB6_9FLOR1.650e-6152.12Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3INH6_9FLOR2.390e-1138.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..394
NoneNo IPR availableCOILSCoilCoilcoord: 412..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..772
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 717..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1758_length_8550_cov_3.990424contigNODE_1758_length_8550_cov_3.990424:5812..8382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7017.t1Gcaud7017.t1Gracilaria caudata M_176_S67 malemRNANODE_1758_length_8550_cov_3.990424 5812..8382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7017.t1 ID=Gcaud7017.t1|Name=Gcaud7017.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=857bp
MEKATALAAARAAARTANEALQSATRGSAVTPIARTVSAPAGAFNAQKFS
VTTPPGEGERAIRMRSPPTAANAASSVDAADGGHTQTKDDAVTQTQPVTA
MDSEDAAASDGSGTDSDEILPDSNVTQRTTIPDSGLHRTDHRSVIISSTA
RRSTTTKSAHGANAPDWSEDPEPRTPNESREPRAVRLMASQGLHSKGVSS
QAGSPNPQGDTGADAGKTACAAAPAPGSEARASQTKITRKDTPNNSAEAL
KEKFRAIRNVLKCQSCLSEGSLVLNGSTAKKGDLIAKCNLCTRRTTGMRL
RSAIEQAITQCGLREKYPVHETAETTRQNTPGRRHAGRETTPAITDALRS
QIVEAVASQTRELSSKVLALQDVIDDLRTELEDAKADNQMLRATAGERVE
GGSLDAEQAVLISELRAELRTAQKQNKELAQELRELQHRDAQRARAARQP
HLDGRVMNEFPRLEEAHLAADHQGADTERGAVVIDAAQNSESRRPATSGL
SAGNDAHGRQSDRECAPNSHAPQERKTWAQIAAQRRPNLADLTQEMRNRI
TSAKAELLAADLAPAQPRRRIIPAALYFAGLKPGPISRYRRALTTAIPGW
ALLSISFVGRMIGEILVHDPMAPRVIATMKALGFRHLSELDTVTDARFKD
RTLGADENLLRNAHACYNRYKRAVDTPNAAARAWFQQACTVLKERYPDLF
SKDGRRRYDRLRDALSERRAARETAPISDATSSTSSDSESSSTESSRSAS
TDHMTDDDGFTVVERRKKGDAAASRGTTPTQKAAHALATNGERTQREGAN
ARTLSDECMNTCDEAELNGTRSAASGPQQHAVASPQPLQTEQPTRGNESE
GQSPTV*
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