Gcaud7849.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7849.t1
Unique NameGcaud7849.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1044
Homology
BLAST of Gcaud7849.t1 vs. uniprot
Match: A0A2V3J5E2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5E2_9FLOR)

HSP 1 Score: 638 bits (1645), Expect = 1.760e-209
Identity = 399/1019 (39.16%), Postives = 591/1019 (58.00%), Query Frame = 0
Query:   53 VQPISIASALRTPKLVKPVPIANKVLISFEDEEEASHSQEFSVRKLRNCPVSFSQASGLSSQTEDAALTFSSTPLNCASANKD--GNNSFAYERVRNESKTSKRSDAKSEEFD-EVPDYDESRKPEHDQPGSQDFYRRDISKVDTPTIRDAGDDLVHNKMLARRTSFFSPEDMENIPPASILTIESPASGYRSLSPSSMPVNSSQEDVTTFVTPPLHFRSF----RDNGSSDSKASESLSST----TSSKGGDSATFPSFSSMKSSDDHPGRSRGSVSASSSSSFKSDDVT-----TSVHEST-------QKCD-RRQRSREQKRVLRIFDRRQNSAESRDIMDNPWFQAMAIESEFGQFTGTVRPTSCPRNVEQ---KGKRAKMSKLGRSLKNQGKRKATESANDRDPKPHDTQSISTSLSSNTGIDPDSSSKDIASEQLRHVLRKALSGKRRLDDVLECMMRVYTRPSENVLQLLYKYFGSVKTVESAVKWITEELRVLQEDMPERKRTKEIEAYIVLSRIYREILFHMFTNGPGTVKKAFLSCGKARSALTQFFEMEVPQGRLELKSWAKTSVSIFRILNSLITDHPSDVVLYISSKEGLLRTIVSKHICFPEVVSFISKLCASDALSETSENHFRYGPPNPDGILLLAKENIIDTLAHVFIDSCDARSGNSSDLI-FDMQRNSLQCLRDISFKAVTMPKFGKTNCTMNMKQIKMLNTALDSIALYSAADHMQAGIEYSLRRIAKGGGDQKVLSSLFERNYPLIRILSLSTDLLDAVFRASESRNFAVRRTIGMVSTRNLEDVLLSKLDDLCVLLESNSTSKTISTTRLSIIQLLRCMFGSDQNNVWISLSNKKVPELLLDVVEENEWCTLIHKAVIECLEASLKRKDAVLLHRQWISCLGRSHGWTTEMRHITGEKQSRGEEAARQRRSQIHCTYTQITSALVDIANSVYKTDLSSLFAIHGVTEPFLKKLEVEITKERKEQNVPCGGPKPEAQSVSVLACAEFLAARLNDVNAV 1043
            V+P    +A+ +PK++KP+PI NKV ISF+D++        S+ +L N  +SFS+ S +SS  ++        P+   S  ++  G+          ++   KR  + +++      D+D S   EH   G +              IR     +  +  L+ R       D+++IPPASI +I +P S       + +P+N+++ + T     PL         R+   + S + + L+S     T  +   S T   F  + +   H    R +   +     +S D T     T  H+ST       QK   R+QR +E KR L IFDR++ S  S    +NPWFQA    ++         P+    +V++   K KR K+SK+ R+ K  GK K    A    P   DT SI +S S+ + ++P + S ++  E+L ++++  +  K+ LD+VL CMM VY+RP+E+ L  LYKYF +  T+ES+++WITEELR  +E+     R++E+++Y ++SRIYR I+ H+F +G G VK+AFL+  K RSAL  FFE + P+ +  L+SW  TS  IFR+ NS + DH SD+ +YIS+K GLL +IV KH+  PE  SFI+KLCA+DALSE+++N  RYG PN +GILLL KE ++D L  +F++SC    G  S +     Q NSL CL+++S +A T+PKFGK NC+ N K IK LNT LDS+ LYS  D M+  I+ +L  I+    D +   S  ERN PL RILSL  DLL AV  ASES+N A+RRT+G +  R+++ VLLSK+D LC ++  +S +   +++RLSI++ LRC+F S +   W +LS  +V E LLDV+EEN   T+ HKAV+EC+EAS+K+K+A +LH+QW+  LG   GW  EM+ +  +K    E    Q RSQ+ C Y +ITS L++IA SV+   LS +F  +G++  F+  LE  + + R+ Q   CGGP+PEAQ+VSVLA  E LAARLNDVNAV
Sbjct:   54 VKPFGFVAAVHSPKILKPIPITNKVFISFDDDDVLGAEHMGSIEQLTNPTISFSETSRVSSHYDET------NPIQPESEKRNSIGSQQMPVPTFSEQNLVGKRQASINKKLSLGAGDFDHSA--EHTNAGCE-----------LINIRSQEKGISQSTGLSARKLSSGIRDIDSIPPASIQSIVTPISRR-----TPIPINANELNETDKGFDPLSDEECIAVSREPTPTKSLSPKRLNSCRELDTDHRTPLSTTHTHF--LHNEGTHEPSMRSTTEVAGCHQNRSRDSTVPLTSTKPHQSTADGPPTEQKTKGRKQRPKEHKRTLYIFDRKKRSEGSYGSGENPWFQATPTLAKNTVLETDAGPSVSSSDVQKPALKEKRTKLSKISRAFKGYGKSKHLHRA----PSSSDTSSIPSSASNASSVEPLTFSVEVTDERLGNIIQDVVHRKKALDEVLNCMMHVYSRPAEDTLHHLYKYFATGTTMESSIRWITEELRTYEEEDSTGIRSEELKSYRMISRIYRAIVLHVFASGAGHVKRAFLNNTKMRSALLDFFEKDAPRAKSALRSWTDTSAGIFRLFNSFMVDHSSDLTVYISNKPGLLHSIVRKHVSIPEASSFIAKLCAADALSESTQNDLRYGAPNTNGILLLVKEKVLDALIEIFVESCTDFPGQHSHMTSLQRQSNSLWCLKELSIRAATIPKFGKNNCSFNGKLIKRLNTGLDSLTLYSYPDSMRTAIDQALAIISGSEEDDERPLSCHERNNPLTRILSLFADLLGAVLIASESKNIAIRRTVGRIDVRHVQHVLLSKVDALCEIVHRDSANGLTASSRLSILRALRCLFASSERKAWDTLSASRVSEHLLDVLEENRLSTMTHKAVLECVEASMKQKEARILHKQWVQALGNHQGWLNEMKRLA-KKLEVEESETEQVRSQLSCVYIEITSILINIAKSVHCKSLSEVFEENGMSLSFMGNLESAVLEIREAQRKSCGGPRPEAQTVSVLASVESLAARLNDVNAV 1041          
BLAST of Gcaud7849.t1 vs. uniprot
Match: R7QGC5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC5_CHOCR)

HSP 1 Score: 300 bits (768), Expect = 5.650e-85
Identity = 215/686 (31.34%), Postives = 331/686 (48.25%), Query Frame = 0
Query:  373 NPWFQAMAIESEFGQFTGTVRPTSCPRNVEQKGKRAKMSKLGRS-LKNQGKRKATESANDRDPKPHDTQSISTSLSSNTGIDPDSSSKD-------------IASEQLRHVLRKALSGKRRLDDVLECMMRVYTRPSENVLQLLYKYFGSVKTVESAVKWITEELRVLQEDMPERKRTKEIEAYIVLSRIYREILFHMFTNGPGTVKKAFLSCGKARSALTQFFEMEVPQGRLELKSWAKTSVSIFRILNSLITDHPSDVVLYISSKEGLLRTIVSKHICFPEVVSFISKLCASDALSETSENHFRYGPPNPDGILLLAKENIIDTLAHVFIDSCDARSGNS-SDLIFDMQRNSLQCLRDISFKAVTMPKFGKTNCTMNMKQIKMLNTALDSIALYSAADHMQAGIEYSLRRIAKGGGDQKVLSSLFERNYPLIRILSLSTDLLDAVFRASESRNFAVRRTIGMVSTRNLEDVLLSKLDDLCVLLESNSTSKTISTTRLSIIQLLRCMFGSDQNNVWISLSNKKVPELLLDVVEENEWCTLIHKAVIECLEASLKRKDAVLLHRQWISCLGRSHGWTTEMRHITGEKQSRGEEAARQRRSQIHCTYTQITSALVDIANSVYKTDLSSLFAIHGVTEPFLKKLEVEITKERKEQNVPCGGPKPEAQSVSVLACAEFLAARLNDVNAV 1043
            NPWFQ  +  S     +      S  +  E  G   K  K+ R  LK +  R+      D        Q  S+S SS   + P S S D             ++S  L   LRKALS KRRL+DVLE  + +  RP E++    YKY  S   VE  V  I                 K   A I   R+Y E+L   + NGP  ++KA LS  KA++ +  F            ++++     + ++L +++ + PSDV  ++S  +G L + V   I   E   FI +LCA++ALS+   +  RYG PN  GI LL KE I D L  VF +SC+     + S   + +Q  S+ CL ++S ++V +PKF K NC+ + K IK LN AL +I L+   +     +  +L    K G          + N  +  +LS   +LLD V  A +S++   RRT+G ++T++LE VLLS++  LC LL+     +      L I+++ R +F S  ++  I+L +  VPE +L  V +N+ C+++H  V+EC+  SL+R+++  LH +W+  L +  G   EM  +   K    +       S    T   +   L   + ++ +     LF      + F+ K+EV + K    +   CGGPKPE   VSVLA A+ LAA++NDV+AV
Sbjct:   58 NPWFQERSDPSPCPDISDDESGLSLAQEAEGVG--IKFEKVKRKRLKRKIARQIFSKEKDGKNAVATNQGSSSSRSSQDILVPPSPSNDSQKTTSDVTVESIVSSAVLEKDLRKALSAKRRLEDVLERALVLRERPPEDLCSQFYKYLSSSTAVERGVTIILNGGFTAS-----AASMKSSFAAIPKHRVYSELLSSAYVNGPSRLRKAVLSQTKAKAQILTFLTQNAGDLGSRTETYSFKVRCLVKVLAAILAESPSDVTDFLSGSQGCLHSFVRYQIRVAEAADFICQLCAANALSDAPGDGLRYGAPNAAGIALLRKEGISDLLVRVFEESCETSVAETDSSARWQLQVMSMGCLVELSKRSVVVPKFSKNNCSYSNKHIKSLNAALQNIDLFQNVERASRLLRAALSCAEKTGRGSGQAEQGKDCNAGVC-VLSSVAELLDMVSSAGDSKSVVTRRTVGKINTKDLERVLLSQIGVLCRLLDQGHEVEGRGRLSLEIVKVFRSLFESRSDDTRIALVDAGVPECVLRAVRKNKLCSILHGCVVECMAVSLRREESGRLHHEWLRALNKV-GMLEEMASVLEGKCGTDKSEQEDAWSTYRSTLVDLGFVLCMFSQNLTRAAFRRLFESEQQYQTFIGKIEVGLGKVANSREGACGGPKPEGAVVSVLANADALAAKINDVDAV 734          
The following BLAST results are available for this feature:
BLAST of Gcaud7849.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5E2_9FLOR1.760e-20939.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGC5_CHOCR5.650e-8531.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1661_length_9227_cov_4.757881contigNODE_1661_length_9227_cov_4.757881:3534..6665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7849.t1Gcaud7849.t1Gracilaria caudata M_176_S67 malemRNANODE_1661_length_9227_cov_4.757881 3534..6665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7849.t1 ID=Gcaud7849.t1|Name=Gcaud7849.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1044bp
MFRPLAWSQNEKSSTEQKRVVELASRKSLCDSSTIPEEMGQNGLGIFAEP
VRVQPISIASALRTPKLVKPVPIANKVLISFEDEEEASHSQEFSVRKLRN
CPVSFSQASGLSSQTEDAALTFSSTPLNCASANKDGNNSFAYERVRNESK
TSKRSDAKSEEFDEVPDYDESRKPEHDQPGSQDFYRRDISKVDTPTIRDA
GDDLVHNKMLARRTSFFSPEDMENIPPASILTIESPASGYRSLSPSSMPV
NSSQEDVTTFVTPPLHFRSFRDNGSSDSKASESLSSTTSSKGGDSATFPS
FSSMKSSDDHPGRSRGSVSASSSSSFKSDDVTTSVHESTQKCDRRQRSRE
QKRVLRIFDRRQNSAESRDIMDNPWFQAMAIESEFGQFTGTVRPTSCPRN
VEQKGKRAKMSKLGRSLKNQGKRKATESANDRDPKPHDTQSISTSLSSNT
GIDPDSSSKDIASEQLRHVLRKALSGKRRLDDVLECMMRVYTRPSENVLQ
LLYKYFGSVKTVESAVKWITEELRVLQEDMPERKRTKEIEAYIVLSRIYR
EILFHMFTNGPGTVKKAFLSCGKARSALTQFFEMEVPQGRLELKSWAKTS
VSIFRILNSLITDHPSDVVLYISSKEGLLRTIVSKHICFPEVVSFISKLC
ASDALSETSENHFRYGPPNPDGILLLAKENIIDTLAHVFIDSCDARSGNS
SDLIFDMQRNSLQCLRDISFKAVTMPKFGKTNCTMNMKQIKMLNTALDSI
ALYSAADHMQAGIEYSLRRIAKGGGDQKVLSSLFERNYPLIRILSLSTDL
LDAVFRASESRNFAVRRTIGMVSTRNLEDVLLSKLDDLCVLLESNSTSKT
ISTTRLSIIQLLRCMFGSDQNNVWISLSNKKVPELLLDVVEENEWCTLIH
KAVIECLEASLKRKDAVLLHRQWISCLGRSHGWTTEMRHITGEKQSRGEE
AARQRRSQIHCTYTQITSALVDIANSVYKTDLSSLFAIHGVTEPFLKKLE
VEITKERKEQNVPCGGPKPEAQSVSVLACAEFLAARLNDVNAV*
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