Gcaud8363.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8363.t1
Unique NameGcaud8363.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length640
Homology
BLAST of Gcaud8363.t1 vs. uniprot
Match: A0A2V3J648_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J648_9FLOR)

HSP 1 Score: 744 bits (1920), Expect = 1.350e-262
Identity = 371/600 (61.83%), Postives = 465/600 (77.50%), Query Frame = 0
Query:   22 SRLNANFKELSPDDVDGFYFAIENSVEELDTRVEAARQATERGTQDADDFYANDLPPAFFVAEQESHMFTAAEVNKALHREDTEFMRRSSLVRRASSFRAKDEARPIPSGISTQ-EPSQRENGRSKSLLGIYGSRTSPFKWSLSNYLQSVASTREKRIIAVSAWLLALIGLIISLAFVTKDFLKSREELASTIGFEKTDLVDLPTLHFCTTGTQLPPFSQLPNGPYQGQPLVWLDTIRGTSSNASFLYPETKSLPQLRVESFTAAGSRCIALNQMDTAQFELENTKPPSCFHCLTIERDSLFRLKERDATSTGAFSNKFIVRLSQNTLVPRCRKLSFGLPLFLTDFFREVFVHHSLDLKLRGIMDYGGYDPQNEAQSYILWPRYRRGFQNKTTDIRMVDQSDMFCNVYMFSGYFYPSTSAEIRYRFNSESFTWERRGTGPYYPKDFRSVSNEHAGLSTQSMSTTIGEELLEDKALYPGQHLFVMTNYSEDGVNELLGVVPAEKKASLQLERNLILGKNESFRSHTILEEVRSGDVKTKADVYVVEFSMLSFLTRVVGKQLSVSWSAFIADFFGLTSLFLDISVYTLIISPLIVRARKRNL 620
            SRL A  ++LS DD +GF+FAI++S++E+DT++EA +    R   DAD+F A D  PA    + ESHMFTAAEV++ALHR+DT    +     + SS R+K     + S    Q  P +R  G+++   G++GSR++P KWSLSNYLQSVASTREKR++AVSAWL++L GLIISLAFVTKDFL S+EELASTI +EKT  + LPTLHFCTTGTQLPPF++LPNG YQGQPLVWLD I+GTSSN S++YPETK LPQ+RVES+T+AG  C AL QMD AQFE ENT+ P+CFHC T++R SLF+ KE   ++ G+ SNKF+VR+SQ+ LV RCRK  FGLP  + DFFR    HH+ +LK+ GI+DYG Y+P +E   YILWP YRRGF+NK+TD  M+D +DMFCNVYMFSGYFYPSTS  I+YRFNSE +TW R G GPYYP+D+  +   +    +QS    IG E+LE++A+YPGQHLFVMTNYS DGVN++L VVP +  ASL+LERNL LGKNESF+S T+LE+V  GD++T ADVYV++ SM  FLT+V G+Q SVSWSAFIADFFGLTSLFLD+SVYT+I+SPLIV+ARKR L
Sbjct:   19 SRLQAAIQDLSNDDANGFFFAIDDSIQEIDTQLEAVQTLLVRSEDDADEFQATDNLPASCAVDLESHMFTAAEVSQALHRDDTGSRLQPVASSQGSSSRSKRRFGSVRSQQHEQLNPGER--GKTRLSRGMFGSRSTPIKWSLSNYLQSVASTREKRLVAVSAWLMSLAGLIISLAFVTKDFLASKEELASTIRYEKTTEIQLPTLHFCTTGTQLPPFAELPNGEYQGQPLVWLDFIKGTSSNVSYIYPETKDLPQVRVESYTSAGDACTALKQMDPAQFEKENTQAPACFHCFTVDRSSLFQFKEATGSNAGSVSNKFLVRVSQHALVSRCRKTQFGLPFDVLDFFRSTIAHHAPNLKVAGIVDYGDYNPTDEEHRYILWPSYRRGFKNKSTDTMMLDMADMFCNVYMFSGYFYPSTSPGIKYRFNSEDYTWVRTGAGPYYPQDYNLLVGRNRAFGSQSHVEVIGNEVLEERAVYPGQHLFVMTNYSADGVNDVLAVVPTDTIASLRLERNLALGKNESFQSDTVLEDVLGGDIRTMADVYVIDVSMQRFLTKVTGEQQSVSWSAFIADFFGLTSLFLDVSVYTVIVSPLIVQARKRKL 616          
BLAST of Gcaud8363.t1 vs. uniprot
Match: A0A2V3J668_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J668_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 1.240e-22
Identity = 120/479 (25.05%), Postives = 205/479 (42.80%), Query Frame = 0
Query:  174 REKRI--IAVSAWLLALIGLIISLAFVTKDFLKSREELASTIGFEKTDLVDLPTLHFCTTGTQLPPFSQLPNGPYQGQPLVWLDTI----RGTSS-NASFLYPETKSLPQ------LRVESFTAAG-SRCIALNQ-------MDTAQFELE-----NTKPPSCFHCLTIERDSLFRLKERDATSTGAFSNKFIVRLSQNTLVPRC-----RKLSFGLPLFLTDFFREVFVHHSLDLKLRGIMDYGGYDPQNEAQSYILWPRYRRGFQNKTTDIRMVDQSDMFCNVYMFSGYFYPSTS-AEIRYRFNSESFT-WERRGTGPYYPKDFRSVSNEHAGLSTQSMSTTIGEELLEDKALYPGQHLFVMTNYSEDGVNELLGVVPAEKKASLQLERNLIL--------GKNE-SFRSHTILEEVRSGDVKTKADVYVVEFSMLSFLTRVVGKQLSVSWSAFIADFFGLTSLFLDISVYTLIISP 610
            R+KR+  +   AW+ A+ G+++++ F+  DF  +++ +A  I   K   ++LP +  C   + +P FS  P   Y G PL  +       R +SS +   +YP+T  LP       L  + F +   S+C  +++       M+T +   +     +T   SC HC+ +      +L        G       V++ +  L   C     R++S    LF+ +        +S +LK RGI+ + G + +N   ++         FQ            D  CNVY FSG+FYPS+  A+I Y +  +S   W + G GPY+   F   +N+H       +     + L +D        +F       DG+N    + P  K +++   +  +         GKNE   R  T   +   G   T  DVY + F   +F T+ +    +++W  FI D F    LF  I ++TLI++P
Sbjct:  164 RDKRLFYLTTGAWIFAVFGMMVTIGFLAADFWYAQKNVAIQIESSKPRPLELPVVTLCNFISNVPHFSHFPTDEYPGLPLFGIQRFALYNRSSSSVSTDLIYPDT--LPNSVDSDSLFEDVFVSWDISQCKKVDEGFDVEREMNTLRSNYDLGISGDTGSTSCQHCIRLGYKKRIKLTPPQHREEGLAPPAVNVKVYRTKLFAACQTGLHRRVSIIAALFVAEI-----QQYSTELKDRGILQFDGEEYRNINMNW---------FQEDNEQF-----FDFCCNVYFFSGFFYPSSDLADISYEYVPDSTEKWVQTGDGPYFSA-FAWKANDH------QIPGPSRDALEKDYFTLDSIEIFAE---DADGINRTAAISPRTKISAISAAQTALYKFKRVTNQGKNEYEIRRSTSNSQ---GYQSTTIDVYDLHFDFDTFETKTILTTPTMTWPEFITDVFEFVGLFTGICIFTLIVAP 608          
BLAST of Gcaud8363.t1 vs. uniprot
Match: R7QDA1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA1_CHOCR)

HSP 1 Score: 110 bits (276), Expect = 9.030e-22
Identity = 116/473 (24.52%), Postives = 199/473 (42.07%), Query Frame = 0
Query:  183 AWLLALIGLIISLAFVTKDFLKSREELASTIGFEKTDLVDLPTLHFCTTGTQLPPFSQLPNGPYQGQPLVWLDT-IRGTSSNASFL----YPET------------------KSLPQLRVESFTAAGSRCIALNQMDTAQFELENTKPPSCFHCLTI---ERDSLFRLKERDATSTGAFSNKFIVRLSQNTLVPRCRKLSFGLPLFLTDFFREVFVHHSLDLKLRGIMDYGGYDPQNEAQSYILWPRYRRGFQNKTT-DIRMVDQS-DMFCNVYMFSGYFYPST-SAEIRYRFNSE-SFTWERRGTGPYYPK-------------DFRSVSNEHAGLSTQSMSTTIGEELLEDKALYPGQHLFVMTNYSEDGVNELLGVVPAEKKASLQLER--NLILGKNESFRSHTILEEVRSGDVKTKADVYVVEFSMLSFLTRVVGKQLSVSWSAFIADFFGLTSLFLDISVYTLIISP 610
            AW  A+IG+I+++ F++KDF  ++  +A  I       ++LP +  C     LPPFS  P   + G PL  + T IR   + +SF     +P+T                  + + QLR + F A        +  +T  FE  +      F+C  +   +R+ L+    RD  +   F+    V + ++ L+  CR       + L   F       +  L+ RGI+D+ G+                +   NKT  D+++V+   D +CNVY FSG+FYP+  +A I YR+N E    WE+ G GPYY               D R++  +   L++  +      E   +  + P   + ++   S          + + KK +++ +    +  G ++S R H  +            D Y V     +F T  +    ++SW  F+ D F    LF  I ++TLI++P
Sbjct:  179 AWACAVIGMIVTIGFLSKDFYVAQRNIAIQIERSAPSPLELPAVTICGDTPNLPPFSNFPTDEHPGLPLFGITTYIRTNRTQSSFRKEIHFPDTLPDAEKSPVEEVVLAEDGERVNQLR-KGFDARREMKSLRDVANTGSFEDLSENKMQAFYCFRVGRKKRELLYPFDPRDGANL--FNPSLQVTVFKSRLLGACRIRFLQRDMVLYRAFAAELYLFADRLQERGILDFNGHP---------------KSVLNKTAYDLKIVNHPIDFYCNVYFFSGFFYPTLDNASISYRYNPEYPNLWEKTGRGPYYSAYTWNYSDPLLVGPDNRALEKDFYTLNSIRLFAEDPTEANNNSIVSPSTGMSILDMASSS--------IYSFKKMNVEGKNVYQMAQGLSQSSRLHFKV-----------VDHYQVNMDFSTFETERILTLPTMSWPEFLTDVFEFVGLFTGICIFTLIVAP 614          
The following BLAST results are available for this feature:
BLAST of Gcaud8363.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J648_9FLOR1.350e-26261.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J668_9FLOR1.240e-2225.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDA1_CHOCR9.030e-2224.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 614..639
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..590
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 591..613
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..198
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 591..613

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_163_length_42078_cov_4.640103contigNODE_163_length_42078_cov_4.640103:13671..15590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8363.t1Gcaud8363.t1Gracilaria caudata M_176_S67 malemRNANODE_163_length_42078_cov_4.640103 13671..15590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8363.t1 ID=Gcaud8363.t1|Name=Gcaud8363.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=640bp
MNFLRTRSASQRDNPEDEHLESRLNANFKELSPDDVDGFYFAIENSVEEL
DTRVEAARQATERGTQDADDFYANDLPPAFFVAEQESHMFTAAEVNKALH
REDTEFMRRSSLVRRASSFRAKDEARPIPSGISTQEPSQRENGRSKSLLG
IYGSRTSPFKWSLSNYLQSVASTREKRIIAVSAWLLALIGLIISLAFVTK
DFLKSREELASTIGFEKTDLVDLPTLHFCTTGTQLPPFSQLPNGPYQGQP
LVWLDTIRGTSSNASFLYPETKSLPQLRVESFTAAGSRCIALNQMDTAQF
ELENTKPPSCFHCLTIERDSLFRLKERDATSTGAFSNKFIVRLSQNTLVP
RCRKLSFGLPLFLTDFFREVFVHHSLDLKLRGIMDYGGYDPQNEAQSYIL
WPRYRRGFQNKTTDIRMVDQSDMFCNVYMFSGYFYPSTSAEIRYRFNSES
FTWERRGTGPYYPKDFRSVSNEHAGLSTQSMSTTIGEELLEDKALYPGQH
LFVMTNYSEDGVNELLGVVPAEKKASLQLERNLILGKNESFRSHTILEEV
RSGDVKTKADVYVVEFSMLSFLTRVVGKQLSVSWSAFIADFFGLTSLFLD
ISVYTLIISPLIVRARKRNLRLRKRQRRENENNAASQQG*
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