Gcaud8552.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8552.t1
Unique NameGcaud8552.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length634
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud8552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 273..633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_162_length_42220_cov_4.454604contigNODE_162_length_42220_cov_4.454604:20384..22285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8552.t1Gcaud8552.t1Gracilaria caudata M_176_S67 malemRNANODE_162_length_42220_cov_4.454604 20384..22285 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8552.t1 ID=Gcaud8552.t1|Name=Gcaud8552.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=634bp
MSEPNPLRSALLSFFNTLLSADDSSAYSIFYAAKNRFEAVASEHYDRFAS
RSDAVYARVISLLDIITPEELLKVCEGFRQISLTDPYNALNAARPAFRAG
IRALLYGCANGIEPCAVSYRHSPHHSGRTVSRVTADRLRVRLPGLLGWPK
SCHAVDKTCVVWIDRAVKGLSSDGAWFVRGLLPYAVVAIAIAHAGIPDMQ
RPWIWLEWMLSSRSMMAEGLRGVVAPSEVVFIALQAMYMPGDMLRKYEYK
DEMEAVILDMFLFGLAALSNIMKDRNNAVAGWSDYKVGLAVVLALSLSPG
DTKWSFVLVDDGNPYGNNLFRCGFVNLLQCAGAEIQLTDDARAYAFVDGQ
IALMKMKRNQLSIARKTKKELIARLNKVAEKGRLARYLKDELHSVSVYCD
VNAELPQHDFITVDELAVLASCQVTLHEHWERRMKTDDDIRSGTLTEDLV
VLVAMALDVDKAVDSSRRKNAYNLKRWRQKTQRGSASPEWLENVNTDEAD
ANSAVESTLRKGVVFADYNQGCVRVTTQIGDETVFRRLGRPTVGATERCS
AVFACVHGHVGCATAAALNGSKWRLPRVTAGKIHDEVVVVECTKDQIYGV
VHTSHDAIQERLLRIPSSSGSDAALVSDAQAPI*
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