Gcaud207.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud207.t1
Unique NameGcaud207.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length98
Homology
BLAST of Gcaud207.t1 vs. uniprot
Match: A0A2V3IH70_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH70_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 5.580e-39
Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQRNISDEKQVDGEFYDDESDHGMDWS 97
            NDYWEYFAPDHKLHF  D +VKN+NTP YI  V EK++ENLRCL AAPSV+MQEIPS+L+ SDDEDE D D     D +Q DGEFYDD+ DHGMD S
Sbjct:  328 NDYWEYFAPDHKLHFEKDNSVKNMNTPRYIDSVKEKVIENLRCLCAAPSVQMQEIPSVLFFSDDEDEQDPDVSTHVDHRQADGEFYDDDEDHGMDAS 424          
BLAST of Gcaud207.t1 vs. uniprot
Match: A0A2V3IJP0_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP0_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 8.690e-29
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQRNISDEKQVDGEFYDDESDHGMDWS 97
            NDYW+YF PDH+LHF  +  + + N+  YI ++  K+MENLRCL+AAPSV+MQE+P   + S+DEDE + D R   D +Q DGEFYDD+ DHGMD S
Sbjct:  330 NDYWQYFEPDHRLHFKKNPEMVDQNSRGYIDQLKIKVMENLRCLNAAPSVQMQEVPPTYFVSEDEDEQNPDMRPRVDRRQADGEFYDDDKDHGMDIS 426          
BLAST of Gcaud207.t1 vs. uniprot
Match: R7QHU9_CHOCR (Histone deacetylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHU9_CHOCR)

HSP 1 Score: 102 bits (254), Expect = 1.200e-23
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQRNISDEKQVDGEFYDDESDHGM 94
            NDYW+YF PDH LHF     + + N+ +YI K+  K+MENLRCL+AAPSV+MQE+P   + S+DEDE D D+R    +K  +GEFYD + D+GM
Sbjct:  330 NDYWQYFEPDHNLHFPKTD-LDDQNSRDYIDKLKIKVMENLRCLNAAPSVQMQEMPPTYFVSEDEDERDPDKRVRPSQKDAEGEFYDHDRDNGM 422          
BLAST of Gcaud207.t1 vs. uniprot
Match: R7QD25_CHOCR (Histone deacetylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD25_CHOCR)

HSP 1 Score: 101 bits (251), Expect = 2.300e-23
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPS-ILYCSDDE-DELDSDQRNISDEKQVDGEFYD 87
            NDYWEYFAP+HKLHF   K V ++N+ +Y+ K+ EKIMENLRCLDAAPSV+M  +PS I Y SDD  D LD D R  +  ++ D EFYD
Sbjct:  303 NDYWEYFAPEHKLHFPPKKMV-DMNSKDYLEKMVEKIMENLRCLDAAPSVQMHTVPSGISYFSDDNNDNLDPDMREENGRRKADNEFYD 390          
BLAST of Gcaud207.t1 vs. uniprot
Match: UPI001E1D7B69 (histone deacetylase 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7B69)

HSP 1 Score: 98.6 bits (244), Expect = 3.140e-22
Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDE-DEL-DSDQRNISDEKQVDGEFYDDESDHGMD 95
            NDYW+Y+ PDHKLHF      +N N   Y+ K+  K++ENLRCL+AAPSV+MQE+P I   S DE D+L D D  N +D++Q +GEF+DD+ D G+D
Sbjct:  330 NDYWQYYEPDHKLHFPKT-AAENNNGREYLEKLKTKVLENLRCLNAAPSVQMQEVPPIYNFSSDEIDDLKDPDAPNGTDKRQAEGEFFDDDKDQGLD 425          
BLAST of Gcaud207.t1 vs. uniprot
Match: A0A7S3A3U2_9RHOD (Histone deacetylase (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3U2_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 2.030e-16
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQR 73
            ND+W+YFAPD  LH   + +++N N   Y+ K+  K+MENLR + AAPSV+MQE+P   Y SDDED+LD D R
Sbjct:  328 NDFWDYFAPDFNLHIK-EMSIENKNGKEYLDKLKVKVMENLRSITAAPSVQMQELPPTYYPSDDEDDLDPDVR 399          
BLAST of Gcaud207.t1 vs. uniprot
Match: M2X5B7_GALSU (Histone deacetylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X5B7_GALSU)

HSP 1 Score: 80.5 bits (197), Expect = 1.070e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQR 73
            NDYWEYFAP++++H      + N N P Y+ KV  K++EN+R L  APSV+MQEIP ++Y  D+EDE D D R
Sbjct:  331 NDYWEYFAPEYRIH-QPPLDLPNKNDPEYLDKVRSKVLENIRHLACAPSVQMQEIPPMMYDVDEEDETDPDVR 402          
BLAST of Gcaud207.t1 vs. uniprot
Match: K3WLG8_GLOUD (Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLG8_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 4.160e-15
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIP-SILYCSDDEDELDSDQRNISDEK-QVDGEFYDDESD 91
            NDY+EY+AP+ KLH   D  ++N N+  Y+ +   KI ENLR L  APSV+M E+P S +   +DED +D D R  +D K Q D EFY D+ D
Sbjct:  331 NDYFEYYAPNFKLHLEPDLDLENANSKEYLEEYKIKIFENLRALTGAPSVQMNEVPPSFMIREEDEDAMDPDLRTDNDGKRQHDAEFYRDDKD 423          
BLAST of Gcaud207.t1 vs. uniprot
Match: A0A8B7ZEV8_ACAPL (Histone deacetylase n=4 Tax=Asteroidea TaxID=7588 RepID=A0A8B7ZEV8_ACAPL)

HSP 1 Score: 78.6 bits (192), Expect = 5.430e-15
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYCSDDEDELDSDQRNISDEK----QVDGEFYDDESD 91
            NDY+EYF PD  LH      ++NLNT  YI +V + + ENL+C++ APSV+MQ++P  L   ++ +E D D RN + E+    +   EFYD + D
Sbjct:  327 NDYFEYFGPDFTLHPDTTTRIENLNTKQYIDQVRQTVQENLKCIEHAPSVQMQDVPPDLLSLEETEEADPDVRNSTKEQDERIEPANEFYDGDKD 421          
BLAST of Gcaud207.t1 vs. uniprot
Match: L1J5X1_GUITC (Histone deacetylase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5X1_GUITC)

HSP 1 Score: 76.6 bits (187), Expect = 2.730e-14
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVK------NLNTPNYIGKVTEKIMENLRCLDAAPSVEMQEIPSILYC---SDDEDELDSDQRNISDEKQVDGEF 85
            NDYW YFAP ++LH  AD   K      N NT  Y+  V   +++NLRCL  APSV+MQ++P  LY    S+DEDEL  DQ+ + D ++  GE 
Sbjct:  332 NDYWAYFAPSYQLH--ADLRGKDWTYSENQNTREYLENVRNTVLKNLRCLQGAPSVQMQQLPPALYVDMDSEDEDELTDDQKRVRDLERAIGEM 423          
The following BLAST results are available for this feature:
BLAST of Gcaud207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH70_9FLOR5.580e-3970.10Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
A0A2V3IJP0_9FLOR8.690e-2955.67Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
R7QHU9_CHOCR1.200e-2353.19Histone deacetylase n=1 Tax=Chondrus crispus TaxID... [more]
R7QD25_CHOCR2.300e-2359.55Histone deacetylase n=1 Tax=Chondrus crispus TaxID... [more]
UPI001E1D7B693.140e-2252.58histone deacetylase 1-like n=1 Tax=Mercenaria merc... [more]
A0A7S3A3U2_9RHOD2.030e-1653.42Histone deacetylase (Fragment) n=3 Tax=Rhodosorus ... [more]
M2X5B7_GALSU1.070e-1552.05Histone deacetylase n=1 Tax=Galdieria sulphuraria ... [more]
K3WLG8_GLOUD4.160e-1547.31Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 ... [more]
A0A8B7ZEV8_ACAPL5.430e-1542.11Histone deacetylase n=4 Tax=Asteroidea TaxID=7588 ... [more]
L1J5X1_GUITC2.730e-1445.74Histone deacetylase n=1 Tax=Guillardia theta (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..97
NoneNo IPR availablePANTHERPTHR10625HISTONE DEACETYLASEcoord: 1..93
NoneNo IPR availablePANTHERPTHR10625:SF201HISTONE DEACETYLASE 3coord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_16293_length_329_cov_6.096639contigNODE_16293_length_329_cov_6.096639:2..295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud207.t1Gcaud207.t1Gracilaria caudata M_176_S67 malemRNANODE_16293_length_329_cov_6.096639 2..295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud207.t1 ID=Gcaud207.t1|Name=Gcaud207.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=98bp
NDYWEYFAPDHKLHFSADKTVKNLNTPNYIGKVTEKIMENLRCLDAAPSV
EMQEIPSILYCSDDEDELDSDQRNISDEKQVDGEFYDDESDHGMDWS*
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