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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8419.t1.start1 | Gcaud8419.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_1620_length_9450_cov_4.776258 3764..3766 + |
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8419.t1.stop1 | Gcaud8419.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_1620_length_9450_cov_4.776258 4831..4833 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud8419.t1 ID=Gcaud8419.t1|Name=Gcaud8419.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=279bp
MFQIGLGSCARQEQYSSWRHKFNFGSKYGQNDSVDKRMDSVHHIHEKKRV
DAYVDTTREAALLAKKVLDALARNCVEHAPPRDHATGDECIQAYFPGTSP
DESRAGVEKRNPSLDSAPQPKSEQDVLDGVENGGSILTIKPNELVCESNT
SLAPLSNDSNILDFVKAIDDINTTFDNSRSLRNVIWGRSNAVGTCGNTKA
EKTSVKDNNSTGHLEVLEHILDGRGGLALQGRKAEFVPSRNTQISPERGK
MRERSGSTPRNSTSTHTIAAQRGGKRTH* back to topspliced messenger RNA >Gcaud8419.t1 ID=Gcaud8419.t1|Name=Gcaud8419.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=837bp|location=Sequence derived from alignment at NODE_1620_length_9450_cov_4.776258:3764..4833+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTCAAATTGGGTTGGGATCATGTGCGCGACAAGAACAATATTCTTC
ATGGCGTCACAAGTTCAACTTCGGTTCGAAGTACGGCCAGAATGATTCCG
TGGACAAGCGAATGGATTCCGTGCATCACATCCACGAAAAGAAAAGGGTG
GACGCATACGTTGATACCACCCGTGAAGCAGCATTGCTCGCTAAGAAGGT
TCTTGACGCTCTGGCTCGGAATTGTGTTGAGCATGCCCCACCTCGTGACC
ATGCCACCGGCGACGAGTGCATCCAAGCATATTTCCCGGGCACAAGCCCT
GACGAATCGAGAGCTGGTGTTGAAAAAAGAAATCCATCGCTCGATTCAGC
ACCTCAGCCCAAATCCGAACAGGATGTTCTGGATGGCGTGGAAAACGGGG
GTTCAATTCTAACGATAAAGCCAAATGAATTGGTGTGCGAATCGAATACA
TCGCTTGCTCCCCTTTCGAATGATAGTAACATCTTGGACTTTGTCAAAGC
CATTGATGATATCAACACAACTTTTGACAATAGCCGTTCTCTACGGAATG
TGATCTGGGGCAGGTCAAACGCCGTTGGAACCTGTGGCAACACAAAAGCC
GAGAAGACTAGTGTTAAGGATAATAATTCCACTGGTCACCTGGAAGTACT
AGAGCATATCTTGGATGGAAGAGGTGGCTTGGCGTTACAGGGACGAAAGG
CTGAGTTCGTTCCCTCAAGAAACACACAGATTAGCCCTGAAAGAGGCAAA
ATGCGAGAACGCTCGGGATCGACGCCGCGCAATAGCACGTCGACGCACAC
TATTGCGGCGCAAAGAGGAGGAAAGCGCACGCATTGA back to topprotein sequence of Gcaud8419.t1 >Gcaud8419.t1 ID=Gcaud8419.t1|Name=Gcaud8419.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=279bp
MFQIGLGSCARQEQYSSWRHKFNFGSKYGQNDSVDKRMDSVHHIHEKKRV
DAYVDTTREAALLAKKVLDALARNCVEHAPPRDHATGDECIQAYFPGTSP
DESRAGVEKRNPSLDSAPQPKSEQDVLDGVENGGSILTIKPNELVCESNT
SLAPLSNDSNILDFVKAIDDINTTFDNSRSLRNVIWGRSNAVGTCGNTKA
EKTSVKDNNSTGHLEVLEHILDGRGGLALQGRKAEFVPSRNTQISPERGK
MRERSGSTPRNSTSTHTIAAQRGGKRTH* back to topmRNA from alignment at NODE_1620_length_9450_cov_4.776258:3764..4833+ Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud8419.t1 ID=Gcaud8419.t1|Name=Gcaud8419.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1070bp|location=Sequence derived from alignment at NODE_1620_length_9450_cov_4.776258:3764..4833+ (Gracilaria caudata M_176_S67 male)
ATGGTAAGTTTCTCTCAGTTCTCGAAAACATTGGTACAAGAAATAATGAG
AAGTGCAAATGAATCCAAAATGCTCTCTAACGCTGACCTTCTAACATTGC
CTCCGAGTGGGTTTGCGTTTTCCATCGCGATGCCCTAGTTTCAAATTGGG
TTGGGATCATGTGCGCGACAAGAACAATATTCTTCATGGCGTCACAAGTT
CAACTTCGGTTCGAAGTACGGCCAGAATGATTCCGTGGACAAGCGAATGG
ATTCCGTGCATCACATCCACGAAAAGAAAAGGGTGGACGCATACGTTGAT
ACCACCCGTGAAGCAGCATTGCTCGCTAAGAAGGTTCTTGACGCTCTGGC
TCGGAATTGTGTTGAGCATGCCCCACCTCGTGACCATGCCACCGGCGACG
AGTGCATCCAAGCATATTTCCCGGGCACAAGCCCTGACGAATCGAGAGCT
GGTGTTGAAAAAAGAAATCCATCGCTCGATTCAGCACCTCAGCCCAAATC
CGAACAGGATGTTCTGGATGGCGTGGAAAACGGGGGTTCAATTCTAACGA
TAAAGCCAAATGAATTGGTGTGCGAATCGAATACATCGCTTGCTCCCCTT
TCGAATGATAGTAACATCTTGGACTTTGTCAAAGCCATTGATGATATCAA
CACAACTTTTGACAATAGCCGTTCTCTACGGAATGTGATCTGGGGCAGGT
CAAACGCCGTTGGAACCTGTGGCAACACAAAAGCCGAGAAGACTAGTGTT
AAGGATAATAATTCCACTGGTCACCTGGAAGTACTAGAGCATATCTTGGA
TGGAAGAGGTGGCTTGGCGTTACAGGGACGAAAGGCTGAGTTCGTTCCCT
CAAGAAACACACAGATTAGCCCTGAAAGAGGCAAAATGCGAGGTACGCCA
TACAGCGCAATGAGTGCCAACATGACGAACAGCGCATCAATTCCAAGTGT
CCCAGACAAATCTAACACGTTCACCTGTTTGGAACGGAAGAACGCTCGGG
ATCGACGCCGCGCAATAGCACGTCGACGCACACTATTGCGGCGCAAAGAG
GAGGAAAGCGCACGCATTGA back to topCoding sequence (CDS) from alignment at NODE_1620_length_9450_cov_4.776258:3764..4833+ >Gcaud8419.t1 ID=Gcaud8419.t1|Name=Gcaud8419.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=837bp|location=Sequence derived from alignment at NODE_1620_length_9450_cov_4.776258:3764..4833+ (Gracilaria caudata M_176_S67 male)
ATGTTTCAAATTGGGTTGGGATCATGTGCGCGACAAGAACAATATTCTTC
ATGGCGTCACAAGTTCAACTTCGGTTCGAAGTACGGCCAGAATGATTCCG
TGGACAAGCGAATGGATTCCGTGCATCACATCCACGAAAAGAAAAGGGTG
GACGCATACGTTGATACCACCCGTGAAGCAGCATTGCTCGCTAAGAAGGT
TCTTGACGCTCTGGCTCGGAATTGTGTTGAGCATGCCCCACCTCGTGACC
ATGCCACCGGCGACGAGTGCATCCAAGCATATTTCCCGGGCACAAGCCCT
GACGAATCGAGAGCTGGTGTTGAAAAAAGAAATCCATCGCTCGATTCAGC
ACCTCAGCCCAAATCCGAACAGGATGTTCTGGATGGCGTGGAAAACGGGG
GTTCAATTCTAACGATAAAGCCAAATGAATTGGTGTGCGAATCGAATACA
TCGCTTGCTCCCCTTTCGAATGATAGTAACATCTTGGACTTTGTCAAAGC
CATTGATGATATCAACACAACTTTTGACAATAGCCGTTCTCTACGGAATG
TGATCTGGGGCAGGTCAAACGCCGTTGGAACCTGTGGCAACACAAAAGCC
GAGAAGACTAGTGTTAAGGATAATAATTCCACTGGTCACCTGGAAGTACT
AGAGCATATCTTGGATGGAAGAGGTGGCTTGGCGTTACAGGGACGAAAGG
CTGAGTTCGTTCCCTCAAGAAACACACAGATTAGCCCTGAAAGAGGCAAA
ATGCGAGAACGCTCGGGATCGACGCCGCGCAATAGCACGTCGACGCACAC
TATTGCGGCGCAAAGAGGAGGAAAGCGCACGCATTGA back to top
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