Gcaud8561.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8561.t1
Unique NameGcaud8561.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length478
Homology
BLAST of Gcaud8561.t1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 749 bits (1933), Expect = 8.930e-270
Identity = 389/445 (87.42%), Postives = 424/445 (95.28%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGGP 445
            MLFDSLTEKM ETVR++RGVDKITEKNVAGAMKQVKRALLDADVNLRVVN LIKQIK+RAIG EV PGV+PGQMLIKIMHEELT IMGK+QAPLA+R+DG+PTVVLLAGLQGAGKTTAAAKLALYCLK+KRSVMLIAGDVYRPAAIDQLKTLG  I+V+VFS+G++ADPRDI+RKG+EKG ++KIDTLIVDTAGRQVID+KLMKELKD+K +S  DETLLVVDAMTGQEAATLT+SFN EVGITGAILTKLDGDTRGGAALSVQQVSGAPIKF GVGE+VEKL+PFIPERMASRILGMGDVLTFVE+A+EQMDE+EAE+MTKRMMEAKFDFNDFL QTK IS+MGSLAGVMKMLPGVGSISS KMAQAEAKLKLADSLIKSMT++ERTNPELLYSGGSARSR+ RISKGAGRSR++AEDLV DF KMRDMMSRMS QM+NG GGP
Sbjct:    1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDKRSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGVGSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQMVNGQGGP 445          
BLAST of Gcaud8561.t1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 640 bits (1651), Expect = 4.280e-227
Identity = 333/431 (77.26%), Postives = 384/431 (89.10%), Query Frame = 0
Query:   17 MRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGS-ISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGGPD 446
            MRGVDKITEKNV GAMK VKRALLDADVNLRVVNAL+KQIK RA+G +VTPGVEPGQML+KIMHEELT IMG NQAPLA RTDG+PTVVLLAGLQGAGKTTAAAKLALYCLKE+RSVM+IA DVYRPAAIDQLKTLG SI V+VF +G++ +PR+IVRKG+++G   KI+T+IVDTAGRQVID+KLMKELKDIK++S ADETLLVVDAMTGQEAATLT+SFN EVGITGAILTKLDGDTRGGAALSVQQVSG+PIKF GVGE+V+KL+PF PERMASRILGMGDVLT VEKAQ+ MDE EAE+MT++MME KFDFNDFL QTK +S MGSL G+MKM+PG+G  I+  K+ +AE KLK+ADS+IKSMT QER NPELLY+  S+RSR+ RI+ G+GRS  +A++++SDF+KMR MM RMS QM+   GGPD
Sbjct:    1 MRGVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEERSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMV---GGPD 428          
BLAST of Gcaud8561.t1 vs. uniprot
Match: A0A5J4YVF1_PORPP (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP)

HSP 1 Score: 547 bits (1409), Expect = 6.310e-189
Identity = 289/448 (64.51%), Postives = 356/448 (79.46%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDG--KPTVVLLAGLQGAGKTTAAAKLALYCLKEK--RSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGG 444
            MLFDSL  +M ET+R+++G DK+TEKNV  ++K+V+RALLDADVNL+VVN+LIK +K RA+GE+V  GV+PGQ  IKI+++EL  IMG    PLAR+      PTV+LLAGLQGAGKTTAAAKLALYC  E   R V+L A DVYRPAAI+QLKTLG+SI  EVF++G++ +P  I R+ +    ++K DT+IVDTAGRQVID+KLM ELK +K   + DE LLVVDAMTGQEAA LT++FN  VGITGAILTKLDGDTRGGAALSV+QVSG PIKF GVGE+VEKL+PF PERMASRILGMGDVL+FVEKAQEQMDE EA R+T++M+EAKFDF DF+ QT+ I+ MGSL G+MKM+PG+  IS  ++  AE +LKLA SLI SMT  ER NP+LL    +ARSRL RI+ G+GRS  +A  L+SDF++MR MM+RM   M++G  G
Sbjct:   66 MLFDSLAGQMSETMRKLQGSDKLTEKNVESSVKEVRRALLDADVNLKVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKSEAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQVIDTKLMAELKRVKNSVTPDEILLVVDAMTGQEAANLTRAFNDAVGITGAILTKLDGDTRGGAALSVKQVSGRPIKFVGVGEKVEKLEPFYPERMASRILGMGDVLSFVEKAQEQMDEAEARRLTQKMVEAKFDFEDFVKQTEMITKMGSLGGMMKMIPGMAGISDAQLTAAERQLKLARSLINSMTRSERRNPDLLIKDRTARSRLQRIAAGSGRSSKDASQLISDFQRMRTMMARMGKTMMDGGPG 513          
BLAST of Gcaud8561.t1 vs. uniprot
Match: A0A6T5W5G4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD)

HSP 1 Score: 544 bits (1402), Expect = 6.780e-188
Identity = 291/459 (63.40%), Postives = 353/459 (76.91%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEK--------------------RSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQML 439
            MLFD+L  K+ ETVR+++G D+I EKNVA AMK VKRALLDADVNLRVVN L+K+++QRA+G EV PGV PGQ  +KI++EEL+ +MG +  PLA  T   P V+LLAGLQGAGKTTAAAKLALYC                        + V+L+A DVYRPAAI+QLKTLG+ I  EVFSLG+E  P  I ++G+E   ++  DT+IVDTAGRQVIDS LM ELK +K   S  ETLLVVDAMTGQEAA LT++FN +VGI+GAILTKLDGDTRGGAALSVQQVSG PIKF GVGE VEKL+PF PERMASRILGMGDVL+FVEKAQE ++EK+A  MTK+M++A+FDF+DFL QT  +S MGS AG+MKMLPG+  I   ++A AEAKLK++ S+I+SMT  ER  P+LL S  SARSRLSRI+ GAGRS  +A  L+SDF++MR MM+RMS  M+
Sbjct:   42 MLFDTLAGKLGETVRKLQGSDRINEKNVAAAMKDVKRALLDADVNLRVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQVIDSNLMSELKRVKAAVSPSETLLVVDAMTGQEAANLTQAFNDQVGISGAILTKLDGDTRGGAALSVQQVSGKPIKFIGVGETVEKLEPFYPERMASRILGMGDVLSFVEKAQEAVEEKQAAEMTKKMLQAQFDFDDFLKQTAMMSKMGSFAGMMKMLPGMSGIDETQLASAEAKLKVSTSMIQSMTKAERRRPDLLISDRSARSRLSRIANGAGRSFTDANTLISDFQRMRTMMARMSRTMV 500          
BLAST of Gcaud8561.t1 vs. uniprot
Match: K9RTX2_SYNP3 (Signal recognition particle protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTX2_SYNP3)

HSP 1 Score: 491 bits (1265), Expect = 3.210e-168
Identity = 249/432 (57.64%), Postives = 339/432 (78.47%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSR 433
            +FD+L +++E   + +RG DKI+E N+  A+++V+RALL+ADVNL+VV   I++++QRA+G EV  GV P Q  IKI+++EL  +MG++  PLA+ +   PTV+L+AGLQGAGKTTA AKLAL+  KE R+ +L+A D+YRPAAIDQL TLG  I+V VF LG+E +P +I R+G+ KG +  +DT+IVDTAGR  ID+ +M EL DIK   + DE LLVVDAMTGQEAA LT++F+ ++GITGAILTK+DGDTRGGAALSV+Q+SG PIKF GVGE+VE LQPF P+R+ASRILGMGDVLT VEKAQE++D  +AE MT++++EA+FDFNDFL QT+ +  MGSL G+MK++PG+G IS+E++ Q E++LK A+S+I SMT QER NP+LL    ++ SR  R+++G+G    +   LVSDF++MR MM +
Sbjct:    1 MFDALADRLESAWKSLRGQDKISETNIQDALREVRRALLEADVNLQVVKTFIEEVRQRALGAEVVAGVRPDQQFIKIVYDELVTVMGESNVPLAQASQA-PTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAIDQLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQERENPQLL---ANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMRSMMQQ 428          
BLAST of Gcaud8561.t1 vs. uniprot
Match: D4ZMY5_ARTPN (Signal recognition particle protein n=8 Tax=Microcoleaceae TaxID=1892252 RepID=D4ZMY5_ARTPN)

HSP 1 Score: 489 bits (1259), Expect = 1.850e-167
Identity = 253/442 (57.24%), Postives = 334/442 (75.57%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTG 443
            +FD+L+E++E   +++RG DKITE N+  A+K+V+RALL+ADVNL VV   IK++  +A G +V  GV+PGQ  IKI+H+EL  +MG++  PLA      PT+VL+AGLQG GKTTA+AKLAL+  KE RS +L+A DVYRPAAIDQL TLG  I+V VF LG +ADP +I R+G+E G    IDT+I+DTAGR  ID  +M EL  IK      ETLLVVDAMTGQEAATLT++FN  +GITGAILTK+DGD+RGGAALS+++VSGAPIKF GVGE+VE LQPF PERMASRILGMGD+LT VEKA+E+ D  +AE+M ++++EAKFDF DFL QT+ +  MGSL G++K++PG+  IS E++   E++LK ++++I SMTI+ER NPELL    ++ SR  R++KGAG +  +   LVSDF++MR +M +M      G G
Sbjct:    1 MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQGSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQ-PPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELL---SNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQMGRGQFPGMG 438          
BLAST of Gcaud8561.t1 vs. uniprot
Match: A0A1X6NS74_PORUM (SRP54 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS74_PORUM)

HSP 1 Score: 489 bits (1259), Expect = 2.120e-167
Identity = 262/423 (61.94%), Postives = 319/423 (75.41%), Query Frame = 0
Query:    1 MLFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGK-PTVVLLAGLQGAGKTTAAAKLALYCLKEKRS-------------------------VMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGG 397
            M+F+SL EKM++TVR++RG DK+TE N+ GA+K+V+RA+LDADVNLRVVN LI  +++RA+G++V  GVEPGQ  IKI++EELT +MGK+ APL+ R  G  PTVVLLAGLQGAGKTTAAAKLALY    K                           V+L+A DVYRPAA++QL+TL   I V+VF+        +I R+G+    + K  T+I+DTAGRQVI+ KLM+EL+D+K  +  DETLLVVDAMTGQEAA LT++FN +VGITGAILTKLDGDTRGGAALSVQ VSG PIKF G GE+VE+L+PF PERMASRILGMGDVLT V+KA+E MD KEAE +TKRM++  FDF DFL Q+K ISTMGS  G+MKMLPGVGSIS ++MA AE KLKLA  LI SMT  ER  P+LL SGG
Sbjct:   20 MMFESLAEKMDQTVRKLRGTDKMTEANIGGALKEVRRAMLDADVNLRVVNQLIADVRERAVGQDVVAGVEPGQQFIKIIYEELTRVMGKDAAPLSTRAAGAGPTVVLLAGLQGAGKTTAAAKLALYVKSRKAEKPSAAAALEANPPXXXXXXXGPPPKVLLVACDVYRPAAVEQLQTLAGMIDVDVFTDDLSLGAVEIARRGLAVATEGKYHTVIIDTAGRQVINDKLMRELRDVKAAAKPDETLLVVDAMTGQEAANLTRAFNDDVGITGAILTKLDGDTRGGAALSVQSVSGKPIKFVGTGEKVERLEPFFPERMASRILGMGDVLTLVDKAEEAMDAKEAEALTKRMVDNTFDFEDFLKQSKMISTMGSFGGLMKMLPGVGSISGQQMAAAEQKLKLATCLINSMTPTERKQPDLLASGG 442          
BLAST of Gcaud8561.t1 vs. uniprot
Match: UPI001688A2CA (signal recognition particle protein n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI001688A2CA)

HSP 1 Score: 488 bits (1257), Expect = 8.150e-167
Identity = 253/443 (57.11%), Postives = 335/443 (75.62%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGG 444
            +F++L++++E   +++RG DKI+E N+  A+++V+RALL+ADVNL+VV   +  ++ +A G EV  GV P Q  IKI+H+EL A+MG+   PLA  TD  PT+VL+AGLQG GKTTA AKLAL+  K+ R  +L+A DVYRPAAIDQL TLG  I+V VF +GS+ADP +I R+GV K   D IDT+I+DTAGR  ID  +M EL  IK      E LLVVDAMTGQEAA LT++F+ ++GITGAILTK+DGDTRGGAALSV+++SG PIKF GVGE+VE LQPF P+RMASRILGMGDVLT VEKAQE++D  EAE++ +++M AKFDF DFL QT+ + +MGSL G++KM+PG+  +SS+++ Q EA+LK A+++I SMT++ER NP+LL   GS  SR  RI+KG+G    +   LVSDF+KMR +M +MS     G GG
Sbjct:    1 MFEALSDRLESAWKKLRGQDKISESNIQEALREVRRALLEADVNLQVVKDFVADVQTKAQGAEVIAGVRPDQQFIKIVHDELVAVMGETNVPLAEATDA-PTIVLMAGLQGTGKTTATAKLALHLRKQNRETLLVATDVYRPAAIDQLITLGKQINVPVFEMGSDADPVEIARQGVAKAKADGIDTVIIDTAGRLQIDQDMMAELARIKETVQPHEVLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDFAEAEKLQEKIMSAKFDFTDFLKQTRMLKSMGSLGGIIKMIPGMNKLSSDQLEQGEAQLKRAEAMINSMTVEERKNPDLL--AGSP-SRRRRIAKGSGYGLEDVSKLVSDFQKMRSLMQQMSQGQFPGMGG 439          
BLAST of Gcaud8561.t1 vs. uniprot
Match: A0A6J4VZS0_9CYAN (Signal recognition particle protein n=1 Tax=uncultured Synechococcales cyanobacterium TaxID=1936017 RepID=A0A6J4VZS0_9CYAN)

HSP 1 Score: 487 bits (1254), Expect = 1.710e-166
Identity = 251/443 (56.66%), Postives = 337/443 (76.07%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGG 444
            +F++L++++E   +++RG D+I+E N+  A+++V+RALL+ADVNL+VV   +++++Q+A+G +V  GV+P Q  IKI+H+EL  +MG+  APLA   D  PT+VL+AGLQG GKTTAAAKLAL   K+ R+ +L+A D+YRPAAIDQL TLG+ I V VF LG+E +P +I R+GVE+   + I+T+I+DTAGR  ID ++M EL  IK      ETLLVVDAMTGQEAA LT++F+AE+GITGA+LTKLDGDTRGGAALSV+Q+SG PIKF GVGE+VE LQPF PERMASRILGMGDVLT VEKAQE+ D  +AE+M ++M+ A FDF+DFL QT+ +  MGSL G+MK++PG+  +S E++ Q E +LK A+++I SMT +ER NP+LL   GS  SR  RI+KGAG    +   LVSDF+KMR +M +M      G GG
Sbjct:    1 MFEALSDRLEGAWKKLRGQDRISESNIQDALREVRRALLEADVNLQVVKDFVEEVRQKALGAQVLTGVQPEQQFIKIVHDELVRVMGETNAPLAI-ADSSPTIVLMAGLQGTGKTTAAAKLALQLRKQNRNALLVATDIYRPAAIDQLVTLGNQIDVPVFELGTEVNPVEIARQGVERAKAENINTVIIDTAGRLQIDPEMMGELAQIKKTVQPHETLLVVDAMTGQEAANLTRTFHAEIGITGAVLTKLDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQQKMLSASFDFSDFLKQTRLLKNMGSLGGIMKLIPGMNKLSDEQLQQGETQLKRAEAMIGSMTQEERRNPDLL--AGSP-SRRRRIAKGAGYGLEDVSKLVSDFQKMRSLMQQMGRGQFPGMGG 439          
BLAST of Gcaud8561.t1 vs. uniprot
Match: B8HVM2_CYAP4 (Signal recognition particle protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HVM2_CYAP4)

HSP 1 Score: 487 bits (1254), Expect = 2.020e-166
Identity = 250/442 (56.56%), Postives = 339/442 (76.70%), Query Frame = 0
Query:    2 LFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDGKPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLKTLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDSKLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGDVLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGVMKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSARSRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTG 443
            +FD+L+E++E   +++RG DKI+E N+  A+++V+RALL+ADVNL+VV   I++++ +A+G EV  G+ P Q  IKI+++EL  +MG+  APLA   +  PT+VL+AGLQG GKTTAAAKLAL+  K+ RS +L+A D+YRPAAIDQL TLG  I V VF LG+E +P +I R+GVE G    +DT+IVDTAGR  ID ++M EL  IKT  +  ETLLVVDAMTGQEAA LT++F+ ++GITGAILTK+DGDTRGGAALSV+Q+SG PIKF GVGE+VE LQPF P+R+ASR+LGMGDVLT VEKAQE++D  +AE+++++++EAKFDF DFL QT+ +  MGSL G+MK++PG+  IS++++ + E +LK A+S+I SMT  ER NPELL    S+ SR  RI+KG+G S  +   LVSDF+KMR +M +M    + G G
Sbjct:    1 MFDALSERLEAAWKKLRGQDKISETNIQEALREVRRALLEADVNLQVVKDFIEEVRVKALGAEVIAGIRPDQQFIKIVYDELVQVMGETNAPLAE-AETAPTIVLMAGLQGTGKTTAAAKLALHLRKQNRSALLVATDIYRPAAIDQLVTLGKQIDVPVFQLGTEVNPVEIARQGVEHGRSLNVDTVIVDTAGRLQIDPEMMAELAQIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLSRKILEAKFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINSMTPDERRNPELL---SSSPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQMGQGGIPGMG 438          
The following BLAST results are available for this feature:
BLAST of Gcaud8561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRY4_9FLOR8.930e-27087.42Signal recognition particle protein n=1 Tax=Gracil... [more]
R7QHF1_CHOCR4.280e-22777.26Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A5J4YVF1_PORPP6.310e-18964.51Signal recognition particle protein n=1 Tax=Porphy... [more]
A0A6T5W5G4_9RHOD6.780e-18863.40Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
K9RTX2_SYNP33.210e-16857.64Signal recognition particle protein n=1 Tax=Synech... [more]
D4ZMY5_ARTPN1.850e-16757.24Signal recognition particle protein n=8 Tax=Microc... [more]
A0A1X6NS74_PORUM2.120e-16761.94SRP54 domain-containing protein n=1 Tax=Porphyra u... [more]
UPI001688A2CA8.150e-16757.11signal recognition particle protein n=1 Tax=Oscill... [more]
A0A6J4VZS0_9CYAN1.710e-16656.66Signal recognition particle protein n=1 Tax=uncult... [more]
B8HVM2_CYAP42.020e-16656.56Signal recognition particle protein n=1 Tax=Cyanot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..477
NoneNo IPR availableCDDcd18539SRP_Gcoord: 103..295
e-value: 2.67753E-99
score: 294.506
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 102..297
e-value: 7.0E-96
score: 334.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 102..297
e-value: 4.5E-71
score: 238.6
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 270..283
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 2.1E-27
score: 107.0
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 2.5E-17
score: 62.8
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 101..302
e-value: 2.8E-7
score: 40.2
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 328..431
e-value: 3.1E-23
score: 82.3
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 4..307
e-value: 4.0E-112
score: 376.0
IPR004780Signal recognition particle proteinTIGRFAMTIGR00959TIGR00959coord: 3..432
e-value: 3.0E-157
score: 521.8
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 3..451
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 313..439
e-value: 1.8E-29
score: 104.4
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 328..431
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..286
e-value: 4.0E-112
score: 376.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..355
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 3..451
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..457
score: 31.513865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_15_length_84509_cov_4.337096contigNODE_15_length_84509_cov_4.337096:17656..19089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8561.t1Gcaud8561.t1Gracilaria caudata M_176_S67 malemRNANODE_15_length_84509_cov_4.337096 17656..19089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8561.t1 ID=Gcaud8561.t1|Name=Gcaud8561.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=478bp
MLFDSLTEKMEETVRRMRGVDKITEKNVAGAMKQVKRALLDADVNLRVVN
ALIKQIKQRAIGEEVTPGVEPGQMLIKIMHEELTAIMGKNQAPLARRTDG
KPTVVLLAGLQGAGKTTAAAKLALYCLKEKRSVMLIAGDVYRPAAIDQLK
TLGSSISVEVFSLGSEADPRDIVRKGVEKGVQDKIDTLIVDTAGRQVIDS
KLMKELKDIKTLSSADETLLVVDAMTGQEAATLTKSFNAEVGITGAILTK
LDGDTRGGAALSVQQVSGAPIKFTGVGEQVEKLQPFIPERMASRILGMGD
VLTFVEKAQEQMDEKEAERMTKRMMEAKFDFNDFLSQTKTISTMGSLAGV
MKMLPGVGSISSEKMAQAEAKLKLADSLIKSMTIQERTNPELLYSGGSAR
SRLSRISKGAGRSRNEAEDLVSDFRKMRDMMSRMSNQMLNGTGGPDGAPG
QAIGNRSQRRKAGKKKAQKKTAKRGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR013822Signal_recog_particl_SRP54_hlx
IPR003593AAA+_ATPase
IPR004125Signal_recog_particle_SRP54_M
IPR042101SRP54_N_sf
IPR004780SRP
IPR036891Signal_recog_part_SRP54_M_sf
IPR027417P-loop_NTPase
IPR022941SRP54