Gcaud8560.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8560.t1
Unique Name	Gcaud8560.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	863

Homology

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BLAST of Gcaud8560.t1 vs. uniprot
Match: A0A2V3IUQ8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ8_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.990e-9
Identity = 76/338 (22.49%), Postives = 151/338 (44.67%), Query Frame = 0

Query:  380 EREYKSRIELEEAKVSELSDYNDSVQRKVRHLEELISESQTTIKALRTESNNAFATLNAFHEWFENPQRQDSASLSLDTFIQDLCQRHSSHGTSALPNIRTELALPTPWKPSGISTNLQTEVGALLDHFRGLVRVYGKREHVFLTLVKEHVGSCERLESQVTQPWTLVQPMLANIEKMKTDVKDGLAVLQSERGAVTNMLDGLREQ---LDEVHVSCQQVLANKVVE----SARIQADQTAEKERRLQNERRVNELTSELQQHV------------------KVKEELSKTSHDLEVCRMVLAETRKDFAKVRQEAECLKISVEQKDVEIDRLKSSLQ 692
            ERE+      +  ++SEL +Y  ++  KV  LE    E +     ++    NA   ++ F+ W+ N  + ++  LSL+  I    +   +   + + ++   L+LP          +L++E+ + +   R LV  Y +RE +    V+E     + L+  + +    ++ +L   + MKT V   L  L+S+   V+  L  L++     +E+     Q  A+   E    S R++  Q + +  + + +  + +L  + +QH+                  K   +LS  +  L+    +L ET++++    +  E LKI +E KD +I++LKS LQ
Sbjct:  392 EREFHDANTAKSTQISELFEYKKTIGSKVIELERSKQELKEQFNTMKGMVKNALLVVSTFYTWY-NDLQHNTDRLSLEKVILAWTRGRPNQLATQIRSLLNTLSLPGRRATREEFRDLESELSSAMGFVRDLVHKYMERETILAGTVQEMSCILDFLQKMLKEAQDGMKELLLQPKTMKTRVAVDLRALRSQHDVVSEFLRTLKQDRRITNELKAVMSQQRAHNEKELKNWSQRLEDAQKSHQTSQREKDECIAKLREQYKQHIDLSSNKLRCLQSELDNAKKENAQLSTKNAKLKSFENLLNETKREYVYSLELNESLKIRLEAKDSDINKLKSELQ 728

The following BLAST results are available for this feature:

BLAST of Gcaud8560.t1 vs. uniprot

BLAST of Gcaud8560.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IUQ8_9FLOR	3.990e-9	22.49	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 625..645
None	No IPR available	COILS	Coil	Coil	coord: 408..428
None	No IPR available	COILS	Coil	Coil	coord: 602..622
None	No IPR available	COILS	Coil	Coil	coord: 253..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..772
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 797..855
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 797..862
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 729..747
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 748..763
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 709..728

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_15_length_84509_cov_4.337096	contig	NODE_15_length_84509_cov_4.337096:13728..17008 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8560.t1	Gcaud8560.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_15_length_84509_cov_4.337096 13728..17008 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8560.t1 ID=Gcaud8560.t1|Name=Gcaud8560.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=863bp
MNNGNDRFNLRLPPNAINKRPTTPDDHRGKFRPPPRSSSERKPNPFRTRE
RRPVSNPSVETKSFKEFTALLRTNPKSKNEGQTPTLPRGITSTGLIHRRE
NSNLREPTHEAGRNAERDIEPTADRTRQTRRKLKSGSEILFLGSNSDSTP
RSSLKQLDLDNEVSFQSPHHELHQGTESKHQAQCSNNSPEHPDSASSNDE
SSEDDENNASAGAYRTRLMNLYDSMDEAQKIPQQVDAILEGWTDRYIYMK
KKLSKIKSTVAQQRAEIDRSEENKEKVQKLLDGNKKECDNLSLKCTSLEG
IIRDEKEKSSKALQTLQERLSQEISSRSSTERKYEKVREELKYLQPLYQK
EVSRRESCKNELVSTHEELSRVKESFSEKEREYKSRIELEEAKVSELSDY
NDSVQRKVRHLEELISESQTTIKALRTESNNAFATLNAFHEWFENPQRQD
SASLSLDTFIQDLCQRHSSHGTSALPNIRTELALPTPWKPSGISTNLQTE
VGALLDHFRGLVRVYGKREHVFLTLVKEHVGSCERLESQVTQPWTLVQPM
LANIEKMKTDVKDGLAVLQSERGAVTNMLDGLREQLDEVHVSCQQVLANK
VVESARIQADQTAEKERRLQNERRVNELTSELQQHVKVKEELSKTSHDLE
VCRMVLAETRKDFAKVRQEAECLKISVEQKDVEIDRLKSSLQLQTERMRH
KHGGRGHSAQKLHGREDELDEARPKVRNKSRNTSTAKQTSSSRLKLSKRT
SVRGDKISSVADRGAGEEDTGFPSFLDNDMGDGIVDDEDWFEDKETTQTF
TERDILGSGDRGRFSVRAPPRDEKKTKKSNVDVDHFGVGKKRQHSKSGLE
ASKSKRSRGKHM*