Gcaud8566.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8566.t1
Unique NameGcaud8566.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length265
Homology
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A2V3IRU9_9FLOR (TATA-box-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU9_9FLOR)

HSP 1 Score: 360 bits (924), Expect = 1.720e-123
Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
Query:   74 PHTSGRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRKLK 263
            P+T GRLSHGI P+IQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVR DIYEAFDNIYHVLQTFRK K
Sbjct:   53 PNTGGRLSHGIVPDIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRADIYEAFDNIYHVLQTFRKAK 242          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A7S0ZL16_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL16_9RHOD)

HSP 1 Score: 293 bits (751), Expect = 1.430e-97
Identity = 156/207 (75.36%), Postives = 174/207 (84.06%), Query Frame = 0
Query:   58 IIPQPSPSTDPA---KPQGPHTSGRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            ++ + S  TDP    +P G   +G+ SHGI P+IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKS   +  ASRKYA+IV KLGY+ AKF EF VQNIVASCDV FPVRLE LA AHS FCSYEPELFPGLIYRM+ PK+VLLIFVSGKVVLTGAKVR++IY+AF+NIY VL  FRK
Sbjct:    9 VVNEGSSITDPVGVPRPLGSGANGQGSHGILPQIQNVVSTTNLGVSLDLKEIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSIDSAKLASRKYARIVQKLGYEAAKFSEFKVQNIVASCDVTFPVRLEPLAQAHSHFCSYEPELFPGLIYRMLDPKVVLLIFVSGKVVLTGAKVRDEIYDAFNNIYPVLCLFRK 215          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A1X6P871_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P871_PORUM)

HSP 1 Score: 294 bits (752), Expect = 3.670e-97
Identity = 153/198 (77.27%), Postives = 167/198 (84.34%), Query Frame = 0
Query:   64 PSTDPAKPQGPHTSGRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            P+  PA   GP      SHGI P+IQNVVATTNL V L+LK IA++ARNAEYNPKRFAAV+MRIREPKTTALIFSSGKIVVTGAKSE  S  ASRKYA+I+ KLGY  A+F EF VQNIVASCDVNFPVRLEGL+H H  FCSYEPELFPGLIYRMI PKIVLLIFVSGKVVLTGAK+R +IY+AF+NIYHVL  FRK
Sbjct:   47 PAATPAPAAGPG-----SHGIVPQIQNVVATTNLGVALELKTIAMQARNAEYNPKRFAAVVMRIREPKTTALIFSSGKIVVTGAKSEDASKLASRKYARIIQKLGYAGARFTEFKVQNIVASCDVNFPVRLEGLSHGHHMFCSYEPELFPGLIYRMINPKIVLLIFVSGKVVLTGAKLRQEIYDAFNNIYHVLLQFRK 239          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A7S0XI96_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XI96_9RHOD)

HSP 1 Score: 284 bits (726), Expect = 8.400e-94
Identity = 149/199 (74.87%), Postives = 165/199 (82.91%), Query Frame = 0
Query:   64 PSTDPAKPQGPHTS-GRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            P+  P    GP    G+ ++GI P IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIR+PKTTALIFSSGKIVVTGAK    +  ASRKYA+IV KLGY+ AKF EF VQNIVASCDV FPVRLE LAHAHS FCSYEPELFPGLIYRMI PK+VLL+FVSGKVVLTGAKV+ +IY+AF NIY VL  F+K
Sbjct:   15 PNAKPGASNGPGAELGQDTNGIVPSIQNVVSTTNLSVNLDLKEIALRARNAEYNPKRFAAVIMRIRDPKTTALIFSSGKIVVTGAKGIDAARFASRKYARIVQKLGYESAKFSEFKVQNIVASCDVQFPVRLEPLAHAHSNFCSYEPELFPGLIYRMINPKVVLLVFVSGKVVLTGAKVKQEIYDAFKNIYPVLCLFQK 213          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A4Y7QKP5_9AGAM (TBP-domain-containing protein n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QKP5_9AGAM)

HSP 1 Score: 280 bits (717), Expect = 4.320e-91
Identity = 157/240 (65.42%), Postives = 182/240 (75.83%), Query Frame = 0
Query:   26 SRRELSLCLAQHLCDASSHSAAGPSTAKPQTDIIPQPSPSTDPAKPQGPHTSGRLS----HGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            S  + S   A     A++++ AGPST+ P       P+PS  PA P  P T  +       GI P +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIF+SGK+VVTGAKSE +S  ASRKYA+IV KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRMIKPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRK
Sbjct:   77 SAAQSSALQAHPAAPATANATAGPSTSTP-------PAPSAVPATP-APLTLEQQHITAVEGIIPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFD-AKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 307          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A409Y723_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409Y723_9AGAR)

HSP 1 Score: 280 bits (716), Expect = 5.560e-91
Identity = 157/230 (68.26%), Postives = 177/230 (76.96%), Query Frame = 0
Query:   41 ASSHSAAGPSTAKPQTDIIPQPSPSTDPAKPQGPHTSGRLS---------HGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            A S  +A P TA   T+ I  P PST PA  Q P T   L+          GI P +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIR+PKTTALIF+SGK+VVTGAKSE +S  ASRKYA+IV KLG+D AKF EF +QNIV SCDV FP+RLEGLA++H QF SYEPELFPGLIYRMIKPK+VLLIFVSGK+VLTGAKVR +IY AF+ IY VL  FRK
Sbjct:   79 APSPLSAPPLTAAQPTNAI--PGPSTPPAA-QVPSTPAALTLEQQHITAVEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFD-AKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLCEFRK 304          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A023GH00_AMBTT (Putative tata-box binding protein tbp component of tfiid and tfiiib (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GH00_AMBTT)

HSP 1 Score: 278 bits (712), Expect = 5.650e-91
Identity = 146/225 (64.89%), Postives = 172/225 (76.44%), Query Frame = 0
Query:   37 HLCDASSHSAAGPSTAKPQTDIIPQPSPSTDPAKPQGPHTSGRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            H    ++ + AG +       I P     + P  P  P T      GI P++QN+V+T NL  KLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIFSSGK+V TGAKSE +S  A+RKYA+I+ KLG+D AKF +F +QN+V SCDV FP+RLEGL   HSQF SYEPELFPGLIYRM+KP+IVLLIFVSGKVVLTGAKVR++IYEAFDNIY +L+ FRK
Sbjct:   44 HSSSGATPTGAGSTPHSASASIFP-----STPGPPMTPITPASADPGIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIIQKLGFD-AKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGFRK 262          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A131ZAT2_RHIAP (Transcription initiation factor TFIID TATA-box-binding protein (Fragment) n=2 Tax=Ixodidae TaxID=6939 RepID=A0A131ZAT2_RHIAP)

HSP 1 Score: 278 bits (711), Expect = 6.560e-91
Identity = 144/198 (72.73%), Postives = 165/198 (83.33%), Query Frame = 0
Query:   64 PSTDPAKPQGPHTSGRLSHGITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            PST P  P  P T      GI P++QN+V+T NL  KLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIFSSGK+V TGAKSE +S  A+RKYA+I+ KLG+D AKF +F +QN+V SCDV FP+RLEGL   HSQF SYEPELFPGLIYRM+KP+IVLLIFVSGKVVLTGAKVR++IYEAFDNIY +L+ FRK
Sbjct:   61 PST-PGPPMTPITPASADPGIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIIQKLGFD-AKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGFRK 256          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A507E7H3_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7H3_9FUNG)

HSP 1 Score: 276 bits (707), Expect = 6.680e-91
Identity = 140/179 (78.21%), Postives = 157/179 (87.71%), Query Frame = 0
Query:   83 GITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRK 261
            GITP +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE +S  A+RKYA+IV KLG+  AKF +F +QNIV SCDV FP+RLEGLA +H  FCSYEPELFPGLIYRM KPKIVLLIFVSGK+VLTGAKVRN+IY+AF+NIY VL  FRK
Sbjct:   38 GITPMLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEEQSKLAARKYARIVQKLGFQ-AKFSDFKIQNIVGSCDVKFPIRLEGLALSHGNFCSYEPELFPGLIYRMTKPKIVLLIFVSGKIVLTGAKVRNEIYQAFENIYPVLAEFRK 215          
BLAST of Gcaud8566.t1 vs. uniprot
Match: A0A1L0FEV2_9ASCO (Probable TATA-box-binding protein n=4 Tax=Hanseniaspora TaxID=29832 RepID=A0A1L0FEV2_9ASCO)

HSP 1 Score: 277 bits (708), Expect = 7.320e-91
Identity = 140/180 (77.78%), Postives = 159/180 (88.33%), Query Frame = 0
Query:   83 GITPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFDNIYHVLQTFRKL 262
            GI P +QN+VAT NLD KLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE++S  ASRKYA+I+ K+G+D +KFK+F +QNIVASCDV FP+RLEGLA AH  F SYEPELFPGLIYRM+KPKIVLLIFVSGKVVLTGAK R +IY++F+NIY VL  FRKL
Sbjct:   51 GIVPTLQNIVATVNLDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEQDSKLASRKYARIIQKIGFD-SKFKDFKIQNIVASCDVKFPIRLEGLAFAHGAFSSYEPELFPGLIYRMVKPKIVLLIFVSGKVVLTGAKKREEIYQSFENIYPVLSEFRKL 229          
The following BLAST results are available for this feature:
BLAST of Gcaud8566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRU9_9FLOR1.720e-12396.84TATA-box-binding protein n=1 Tax=Gracilariopsis ch... [more]
A0A7S0ZL16_9RHOD1.430e-9775.36Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6P871_PORUM3.670e-9777.27Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XI96_9RHOD8.400e-9474.87Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A4Y7QKP5_9AGAM4.320e-9165.42TBP-domain-containing protein n=1 Tax=Rickenella m... [more]
A0A409Y723_9AGAR5.560e-9168.26Uncharacterized protein n=1 Tax=Panaeolus cyanesce... [more]
A0A023GH00_AMBTT5.650e-9164.89Putative tata-box binding protein tbp component of... [more]
A0A131ZAT2_RHIAP6.560e-9172.73Transcription initiation factor TFIID TATA-box-bin... [more]
A0A507E7H3_9FUNG6.680e-9178.21Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A1L0FEV2_9ASCO7.320e-9177.78Probable TATA-box-binding protein n=4 Tax=Hansenia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 131..149
score: 80.29
coord: 112..131
score: 84.68
coord: 88..103
score: 59.57
coord: 222..238
score: 85.36
coord: 179..195
score: 66.21
coord: 203..218
score: 83.78
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 86..166
e-value: 7.0E-32
score: 109.2
coord: 176..258
e-value: 1.5E-31
score: 108.1
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 55..262
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 82..262
score: 29.049606
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 89..259
e-value: 6.7E-83
score: 278.3
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 93..179
e-value: 6.7E-83
score: 278.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..85
NoneNo IPR availablePANTHERPTHR10126:SF42TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 55..262
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 172..260
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 84..170
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 207..256
IPR033710TATA-box binding protein, eukaryoticCDDcd04516TBP_eukaryotescoord: 85..259
e-value: 1.03004E-122
score: 344.973

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_15_length_84509_cov_4.337096contigNODE_15_length_84509_cov_4.337096:26657..27806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8566.t1Gcaud8566.t1Gracilaria caudata M_176_S67 malemRNANODE_15_length_84509_cov_4.337096 26657..27806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8566.t1 ID=Gcaud8566.t1|Name=Gcaud8566.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=265bp
LLVSDVVLCLLLIDAPKQLHLQPLHSRRELSLCLAQHLCDASSHSAAGPS
TAKPQTDIIPQPSPSTDPAKPQGPHTSGRLSHGITPEIQNVVATTNLDVK
LDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSE
RESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHA
HSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRNDIYEAFD
NIYHVLQTFRKLKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS
IPR033710TBP_eukaryotic