Gcaud8568.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8568.t1
Unique NameGcaud8568.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length228
Homology
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IRX9_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 287 bits (734), Expect = 2.580e-95
Identity = 137/198 (69.19%), Postives = 156/198 (78.79%), Query Frame = 0
Query:   29 KAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRI 226
            +AEY + F N LTP  FG +IP+ GLV+SP+ GASHSNR+SLLTVR  ASPQVEQIAETG NGR V  AEHLRD ++GVKTV  A GPT+ GN TTLRF VDC HPF+T VGMIAPSPDWLV V N NL  +GRF+       IAYDAGTDDG +FT+PTDASLD PSEPQKNIAPLVEDDTD F+GR +G Y I+R+
Sbjct:   38 QAEYVVNFTNFLTPRRFGRRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGRFISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IUA8_9FLOR (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 1.680e-93
Identity = 138/228 (60.53%), Postives = 174/228 (76.32%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCK-KAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
            M+  V   LL+LAL + V    A+  C+ KA YK+TFRN+LTPA FG  IP+ GLVFSP+ GASHSNRIS LT+RG+ASPQVEQIAETG NGR V  A++LR  ++GV++V +A GPT+ G  TTL + VDC HPF+T +GMIAPSPDW+V + NRN+   G+F+    G +IAYDAGTDDG +FT+P DASLD P+EPQKNIAPLVED+TD F GR VG + I++I+
Sbjct:    1 MIHQVTAFLLSLALFQAV---AAERRCRGKAIYKVTFRNLLTPANFGKLIPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGKFITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKIK 225          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IS06_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 280 bits (716), Expect = 9.670e-93
Identity = 136/227 (59.91%), Postives = 171/227 (75.33%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
            M+  +I  +L LA+ E V A G      +A Y++TFRN+LTP  FGD IPE GLVFSP+ GASHSNRIS  T+RG+ASPQVEQIAETG NGR V+ A +L+ +++GV +V AA GPT+ GN TTL F VDC HPF+T +GMIAPSPDW+V + NR L   G F+    G LIAYD GTDDG +FT+P DASLD P+EPQ+NIAPLVED+TD F+GR VG ++I+R++
Sbjct:    1 MIRKLIAFVLALAVFEVVLAEGHCTG--RALYRVTFRNLLTPENFGDLIPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLIRDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRVK 225          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IT76_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 3.030e-89
Identity = 135/227 (59.47%), Postives = 167/227 (73.57%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
            M+  V   LL+LAL++ V A G  +   KA Y+++F+N+LTP  FG+ IPE GLVFSP+ GASHSNRIS LT+RG+ASPQVEQIAETG NGR V  A +LR   +GV  V AA GPT+ GN T L + VDC HPF+T +GMIAPSPDW+V + NRN+   G+F+    G LIAYD GTD G +FT+P DASLD P+EPQ NIAPLVED+TD F GR VG + I+RI+
Sbjct:    1 MIRQVTVFLLSLALLQAVSADGHCSG--KAIYRVSFQNLLTPKNFGNLIPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGKFITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRIK 225          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IT49_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 268 bits (686), Expect = 3.510e-88
Identity = 136/227 (59.91%), Postives = 163/227 (71.81%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
            M+  V    L L L+  V   G  +   +A Y+++F N+LTP  FG  IP+ GLVFSP+ GASHS+RIS LTVRG+AS QVEQIAETGDN R V  A +LR  + GV  V AA GPTL G  TTL + VDC HPF+T +GMIAPSPDW+V + NRN+   G+FV   +G LIAYDAGTDDG +FT P DAS+DKPSEPQKNIAPLVED+TD F GR VG + I+RIR
Sbjct:    1 MMRQVTAFFLVLTLVHVVPVEGRCSG--RAVYRVSFHNLLTPENFGKLIPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGKFVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRIR 225          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IRW7_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 259 bits (663), Expect = 1.020e-84
Identity = 127/226 (56.19%), Postives = 163/226 (72.12%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRI 226
            M+  V+   LTLAL E    +G      +A Y+++F N+LTP  FG+ IP  GLVFSP+ GASHSNR S  T+RG+ASPQVEQIAETG NGR V  A +L    K V++V +A GPT+ G  T+L F VDC  PF+T +GM+APSPDW+V + NRN++  G F+ S  G LIAYD GTDDG +FT+P DASLD P+EPQKNIAPLVED+TD F+GR +GT+ I+++
Sbjct:    1 MIRKVLAVFLTLALFEAAVGSGCSG---QAVYQVSFTNLLTPENFGELIPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGK-VRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMFRDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKV 222          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IRX0_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 252 bits (644), Expect = 7.880e-82
Identity = 130/228 (57.02%), Postives = 162/228 (71.05%), Query Frame = 0
Query:    1 MLSNVIKALLTLALIETVFATGAKASCK-KAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
            M+  V    L+LAL + V    A+++C  +A Y++TF N+LT   FGD IP  GLVFSP+ GASHSNR S  T+RG+ASPQVEQIAETG NGR V  A++++   K V TV AA GP+L G  T+L F VDC  PF+T +GMIAPSPDW+V + NRN++  G F+P   G LIAYD GTDDG +FT P DASLD P+EPQ NI PLVED+TD F+GR VG + I RI+
Sbjct:    1 MIRQVTAFFLSLALFQAV----AESACSGRAVYRVTFTNLLTAENFGDLIPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGK-VFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMFRNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRIQ 223          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IF45_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 1.110e-74
Identity = 121/206 (58.74%), Postives = 144/206 (69.90%), Query Frame = 0
Query:   23 AKASCK-KAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYE-KGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRI 226
            ++A C  +A Y++ F NMLTP  FG KIPE GL FSP+   SHSNR S LTVRG+ASPQVEQIAETG NGR +  AE+L+ A++GV+ V    G    G   T+   V+C +PF+T + MIAPSPDW+V V N N  +  G F   + G LIAYDAGTDDGGDFT  +DAS D PSEPQKNIAPL ED+TD FDGR VGTY   RI
Sbjct:   19 SQAMCSGEAVYQVIFNNMLTPQTFGSKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMGAG-PGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A2V3IFK3_9FLOR (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 1.790e-47
Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 0
Query:   96 FAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGRPVGTYFIKRIR 227
             A +LR  + GV  V AA GPTL G  TTL + VDC+HPF+  +GMIAPSP+W+V   NRN+    +FV   +G LIA DAGTDDG +FT P DAS DKPSEPQKNIAPLVED+ D F+ R VG + I+RIR
Sbjct:    1 MARNLRSQRHGVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNMLRDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRIR 132          
BLAST of Gcaud8568.t1 vs. uniprot
Match: A0A151E591_9ARCH (Spondin domain-containing protein n=1 Tax=Thermoplasmatales archaeon SG8-52-4 TaxID=1803819 RepID=A0A151E591_9ARCH)

HSP 1 Score: 100 bits (248), Expect = 3.090e-22
Identity = 71/226 (31.42%), Postives = 112/226 (49.56%), Query Frame = 0
Query:    4 NVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIPEGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHLRDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLVLVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQKNIAPLVEDDTDAFDGR--PVGTYFIKRIR 227
            N++  +  + LI T+F  G         Y++TF    +     D  P     FS + GASH+  ++       +SP ++ +AETGD   L     +    K   K +++  G + S    ++ F V   +P VT V MIAPSPDW V V + NL+E+G FV      L AYDAGTD+G ++T+P +     PS+P   I   +E     ++    P+GT+  K+++
Sbjct:    5 NLVFIIAVILLISTLFVPGCIEK-DTVTYEVTFTATWSEETHPDDFPSNPH-FSGLIGASHNEEVAFWKEGELSSPGIKNMAETGDKSPLNLEIGNAILNKTAFK-LISGGGISTSPGSVSVEFKVSEEYPLVTLVTMIAPSPDWFVGVDSLNLFEEGAFVNEKTVVLYAYDAGTDNGTNYTSPNE-----PSDPPVPIF-KIEGYPFFYEDELVPLGTFTFKKVK 221          
The following BLAST results are available for this feature:
BLAST of Gcaud8568.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX9_9FLOR2.580e-9569.19Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA8_9FLOR1.680e-9360.53Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS06_9FLOR9.670e-9359.91Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT76_9FLOR3.030e-8959.47Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT49_9FLOR3.510e-8859.91Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW7_9FLOR1.020e-8456.19Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX0_9FLOR7.880e-8257.02Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IF45_9FLOR1.110e-7458.74Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK3_9FLOR1.790e-4759.09Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A151E591_9ARCH3.090e-2231.42Spondin domain-containing protein n=1 Tax=Thermopl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 30..205
e-value: 3.1E-29
score: 102.4
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 20..217
score: 27.48826
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 21..216
e-value: 1.4E-41
score: 144.5
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 26..205
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 26..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_15_length_84509_cov_4.337096contigNODE_15_length_84509_cov_4.337096:32414..33097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8568.t1Gcaud8568.t1Gracilaria caudata M_176_S67 malemRNANODE_15_length_84509_cov_4.337096 32414..33097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8568.t1 ID=Gcaud8568.t1|Name=Gcaud8568.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=228bp
MLSNVIKALLTLALIETVFATGAKASCKKAEYKITFRNMLTPAEFGDKIP
EGGLVFSPITGASHSNRISLLTVRGYASPQVEQIAETGDNGRLVKFAEHL
RDAKKGVKTVVAATGPTLSGNRTTLRFMVDCNHPFVTFVGMIAPSPDWLV
LVANRNLYEKGRFVPSVWGKLIAYDAGTDDGGDFTNPTDASLDKPSEPQK
NIAPLVEDDTDAFDGRPVGTYFIKRIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf