Gcaud8735.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8735.t1
Unique NameGcaud8735.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length576
Homology
BLAST of Gcaud8735.t1 vs. uniprot
Match: A0A2V3IH09_9FLOR (AIG1-type G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH09_9FLOR)

HSP 1 Score: 320 bits (820), Expect = 2.260e-98
Identity = 186/521 (35.70%), Postives = 277/521 (53.17%), Query Frame = 0
Query:   29 KTKAANVVFGVLVKYNCSSKEAVLGFAAASADRIEDVIAKIDDFNRKARAVFAPKSTYVLLRIRGKYDPAIEEFSFATLLNILTFVCSMEGDVHLASAHTSSLQALKEDRTTLLLEAEQGIPERLDWDKKRRVFLLGKTRSGKSTLGNALTRGRSFTVSQATTGTMRVEKCERLDVEGSTRWITEVYDTPGLFDRDDLDIFYKADIEDHVRALQRASTLIMTIKVDEGIDSAVWDSLQTYRELFGGSMFSMLALVLTINEPGSAKKLDETVERHWPTITGVNKDILKENMFAVSLQDLRTLEESRSHEVVEQLAKLCRQNSMKPLGAFVEHFNKIRTALSSQAGGVSQRYQELLNSGWSAYEELTSQYEGSGYVRMKCSGPNSFNGFIMKGKMSTRGEKKSLLAKLIPSRGRTVLAVKTDLTVSYGEWSGFAKEHKNEENRSDLMWKFGERLYRNGFGVIVRRGGCQRRLGFSVEHHEVHIFQPSEKAQQEVNRALYSLTNECPEELSAGAIADIADEALP 549
            K  ++ VVF ++VKY      A LGFA  S DRIED +  ID F R  + V A K+ YV +RIRGKYD   E  S        T+     GD                              E  ++D+ RRV+L+G TRSGKSTLGNAL R   FTVS+  TGTMR+E+ ER++      W T+ +DTPGL D+D LD++Y++ IEDH++  QRASTLIMT+  D GI+ A + SL  Y+ELFG SM SML +VLT+N+     +L+     + PT+ G++  +  +N+F VSL DLR   +S S   V+++A  C+  SMK + A  + +  ++ AL  + G + +    L++ GW AY++LT Q+E S YV++       F+GF+MK    ++     + A ++    +  + V  D  +S   W+ F +E+K++ +  DLMW FG+ L R G  V+V+  G        V    + IF P      E++  L    +E  + L    +  +    +P
Sbjct:   97 KAHSSTVVFAIVVKYPVGRISATLGFAGMSCDRIEDFVKGIDRFYRTLQHVNATKTAYVNVRIRGKYDTETESLS--------TY-----GD------------------------------EPNEYDQLRRVYLVGNTRSGKSTLGNALLRKSLFTVSKRMTGTMRIERGERVEELNGDIWRTDYFDTPGLNDKDGLDVWYQSAIEDHIKTFQRASTLIMTVSADSGINGAAFQSLGNYKELFGQSMASMLIVVLTVNDAAEESELELVKALNLPTVAGLDARLDHQNVFCVSLYDLRHNYDSASRRTVQRIASRCKSMSMKLVEALADRYRSLQNALREKRGSLEKELTSLIDEGWQAYDQLTEQFENSAYVKLTADEDGWFDGFVMKKTSPSKKSMAFMTAGVLNRIRKFAIHVNHDSEISTSLWNRFLEENKSDRHNRDLMWFFGDLLDRKGLAVVVQELGTVLVGSLRVNRFTIRIFDPVHYTHDELHTYLQEKLDENAQCLRPEVLGTLLKSVVP 574          
The following BLAST results are available for this feature:
BLAST of Gcaud8735.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IH09_9FLOR2.260e-9835.70AIG1-type G domain-containing protein n=1 Tax=Grac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 123..358
e-value: 1.8E-17
score: 65.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 144..304
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 160..351
e-value: 2.7E-13
score: 49.7
NoneNo IPR availableCDDcd00882Ras_like_GTPasecoord: 163..331
e-value: 2.44098E-8
score: 51.6884

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1598_length_9575_cov_4.429249contigNODE_1598_length_9575_cov_4.429249:4650..6566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8735.t1Gcaud8735.t1Gracilaria caudata M_176_S67 malemRNANODE_1598_length_9575_cov_4.429249 4650..6566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8735.t1 ID=Gcaud8735.t1|Name=Gcaud8735.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=576bp
MSFLLDPIGFVADVIAISNALGTKSSTAKTKAANVVFGVLVKYNCSSKEA
VLGFAAASADRIEDVIAKIDDFNRKARAVFAPKSTYVLLRIRGKYDPAIE
EFSFATLLNILTFVCSMEGDVHLASAHTSSLQALKEDRTTLLLEAEQGIP
ERLDWDKKRRVFLLGKTRSGKSTLGNALTRGRSFTVSQATTGTMRVEKCE
RLDVEGSTRWITEVYDTPGLFDRDDLDIFYKADIEDHVRALQRASTLIMT
IKVDEGIDSAVWDSLQTYRELFGGSMFSMLALVLTINEPGSAKKLDETVE
RHWPTITGVNKDILKENMFAVSLQDLRTLEESRSHEVVEQLAKLCRQNSM
KPLGAFVEHFNKIRTALSSQAGGVSQRYQELLNSGWSAYEELTSQYEGSG
YVRMKCSGPNSFNGFIMKGKMSTRGEKKSLLAKLIPSRGRTVLAVKTDLT
VSYGEWSGFAKEHKNEENRSDLMWKFGERLYRNGFGVIVRRGGCQRRLGF
SVEHHEVHIFQPSEKAQQEVNRALYSLTNECPEELSAGAIADIADEALPL
ALHFREKIRRERFHRVPRNSSSSSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006703G_AIG1