Gcaud8394.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8394.t1
Unique NameGcaud8394.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length236
Homology
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A2V3IXL7_9FLOR (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL7_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 1.330e-97
Identity = 140/220 (63.64%), Postives = 177/220 (80.45%), Query Frame = 0
Query:   12 PRQTPSIASRIVCVQQKDAPSPKSGLSDMKRTLFSLLEGLNRGIDIDPDSETMTSEEADVEEAIEALEDYYPPQFPTRDPRLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQVQGRVRASNEERQIWEPENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVFQRIAEDN 231
            PR++    +   C++Q+ A +P   +S +K  L S ++ L+RG+ IDPD++TMT EEADVE+ IE LED YPPQ PT+DPR  G WRL YTSS+ITRYFGGVTGLQRLLPNA+VGEI Q I+ E G   F E ++FE+P++GNEV LDI+++GR+RA++EERQ+WEPE+VKCG  SWFAD+WKTFRAFQVADITYLDDELRITRGQTGSV+VFQ+   D+
Sbjct:   24 PRRSRKPFTIFACLKQESARNPAPAVSPLKERLLSGIDNLDRGLSIDPDADTMTPEEADVEDLIEELEDNYPPQVPTKDPRNSGSWRLKYTSSSITRYFGGVTGLQRLLPNASVGEIIQEIDSEGGKCMFSEKISFEVPIVGNEVCLDIRIEGRMRAASEERQLWEPESVKCGVFSWFADSWKTFRAFQVADITYLDDELRITRGQTGSVSVFQKALSDD 243          
BLAST of Gcaud8394.t1 vs. uniprot
Match: R7QI70_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI70_CHOCR)

HSP 1 Score: 150 bits (380), Expect = 6.770e-43
Identity = 70/136 (51.47%), Postives = 95/136 (69.85%), Query Frame = 0
Query:   95 GRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQVQGRVRASNEERQIWEPENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVFQRIAED 230
            G W L+YTSS+ITR+FGG TGLQRLLP   VG + Q I+ E+GT    E ++FE+P++G  +       G +RA+++ RQ W+P+ V+  F   FAD WKT RAFQ+AD ++LD+ LRITRGQTGSV VF +  +D
Sbjct:    3 GTWELLYTSSSITRFFGGATGLQRLLPAGEVGRVEQYIDAENGTCEVREELSFEVPIVGTPMKKIAVASGTIRATSQTRQAWDPKEVQFYFFKQFADGWKTLRAFQIADTSFLDESLRITRGQTGSVNVFGKRDDD 138          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7S3A696_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A696_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 7.000e-22
Identity = 62/192 (32.29%), Postives = 106/192 (55.21%), Query Frame = 0
Query:   38 SDMKRTLFSLLEGLNRGIDIDPDSETMTSEEADV-EEAIEALEDYYPPQFPTRDPRLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQVQGRVRASNEERQIWEPENVKCGFLSWFADN-WKTFRAFQVADITYLDDELRITRGQTGSVAVFQRI 227
            S +K  +   L+GL +G      S  +T ++ D+ ++ +  LED  P         + GRW+L++TSS++TR+  G++G+  LLP     ++ QVIE ED  S  +E V++     G  +  D  + GR +  +  R  W P+ +   FL + A++ WK   AF+  ++TYLD EL+I RG+ G + +++RI
Sbjct:   39 SMLKEKVLVSLKGLEKGYG----SVVVTDDQDDIIDDLVCDLEDENPEPSAEDSSFMVGRWKLLFTSSSLTRFQKGISGIHSLLPVGKSMDLEQVIEPEDFRSYLVEKVSY----FGGALKGDALIDGRYKWLSSNRLSWMPDVLNLWFLRFQAESGWKALGAFRSLEVTYLDYELKIERGEVGQIYIWKRI 222          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7S0AVI8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVI8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.200e-12
Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 0
Query:   93 LPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGN---EVSLDIQVQGRVRASNEER---QIWEPENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVF 224
            L G W L++T+S+  ++  G++GL    PN   G + Q ++    TS        E+P   +    V+ D +++G V     E       EP+ VK G  S  AD+WK      + DITYLDD+LR+ RG T    +F
Sbjct:   19 LTGDWDLIFTTSSTMKFNQGLSGLGGSFPNGKFGGVVQKLQNSKWTSDIEYKERIEVPAGASFDVTVTGDWKLKGTVNLFTGEPTTVMAIEPDKVKYGPTSTKADHWKALGPLNLLDITYLDDDLRVMRGNTSVNTMF 156          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7S4MXT9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXT9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.700e-11
Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 0
Query:   93 LPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTF-ELPLIGNEVSLDIQVQG--RVRAS-----NEERQIWE--PENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVF 224
            L G W L+Y+SS+  ++  G++GL    PN   G + Q +E     S F+ +V + E   I    S D+ V G   +R S      +   +    PE V+ GF S  AD+WK+     V DITYLDD+LRI RG T +  VF
Sbjct:  477 LTGEWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKQKLEA----SKFMSDVEYVERIDIPAGQSFDVTVNGDWSLRGSINIFSGDPTTVLNVAPERVEYGFTSTRADHWKSVGPLNVLDITYLDDDLRIMRGNTSTDTVF 614          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A6T7K4J5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K4J5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.010e-8
Identity = 64/201 (31.84%), Postives = 96/201 (47.76%), Query Frame = 0
Query:   41 KRTLFSLLEGLNRGIDIDPDS-ETMTSEEADVEEAIEALEDYYPPQFPT-----RDPRLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTST--FLENVTFELPLIGNEVSLDIQVQG--RVRAS-----NEERQIWE--PENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVF 224
            K+ L SLL  +N   D  P   ET  +E  +V +A+ ALE     +  T     +   L G W L+Y SS+   +  G+TG+ + LP      + Q +E    +S   F+E  T+++  IG + S D+ V G   +R S      E   + +   E VK G     A+ WK+       D+TYLDD+LRI RG T   ++F
Sbjct:  406 KQYLVSLLSAINSDEDRLPIGLETTDTENEEVVKAVVALETAPTNKIITSRGTIKAEELAGTWELLYQSSSSMVFNQGLTGVGKNLPRTKFSRLLQKLEKTKYSSDVDFIE--TWDVG-IGEDNSFDVTVTGDWELRDSISLFTGEPSLVLKVVAERVKYGVTDQQAEYWKSLGPMLSLDMTYLDDDLRIMRGNTSKSSIF 603          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7S1CXT1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXT1_CYCTE)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-7
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 0
Query:   93 LPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTF--ELPLIGNEVSLDIQVQGR--VRAS-----NEERQIW--EPENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVF 224
            L G+W L+YT+S+  ++  G++G+    PN   G + Q +     +S  + +V +   + +  +  S D++V G   +R S      +   ++  EP  V  G     AD+WK+     + DITYLD+ LRI RG T + +VF
Sbjct:  111 LNGKWELLYTTSSAMKFNKGLSGIGGSFPNGKFGGLQQTLI----SSRLISDVEYTERIDVNPSAASFDVRVTGNWDLRQSVSLFTGQPTTVFSFEPGQVIYGPTKTKADHWKSLGPLTMLDITYLDNNLRIMRGNTATDSVF 249          
BLAST of Gcaud8394.t1 vs. uniprot
Match: K9RVA7_SYNP3 (PAP_fibrillin n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RVA7_SYNP3)

HSP 1 Score: 58.9 bits (141), Expect = 4.290e-7
Identity = 64/208 (30.77%), Postives = 94/208 (45.19%), Query Frame = 0
Query:   41 KRTLFSLLEGLNRGIDIDPDSETMTSEEADVEEAIEALEDYYPPQFPTRDP-RLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQVQ------GRVRASNEE-----RQIWEPENVKCGFLSWFADNWKTFRAFQVA----------DITYLDDELRITRGQTGSVAVFQR 226
            K  L + + GLNRGI  +P      +E+  V+E  + LE   P   P + P +L G WRL+YTSS        + GL R  P   +G+I Q +  E+  + F     + LP +   VS+  + +       RVR   +      RQ+    N +  F+S  A   KT  +              DITYLDD+LR+ RG  GS+ V  +
Sbjct:    3 KAALLTAIAGLNRGILANP------TEKKRVDELAQGLEAVNPTPDPLKAPDKLAGNWRLIYTSSQ------ALLGLDRA-PLVKLGQIYQCVRPEE-QAIFNIAELYGLPYLEGLVSVVAKFEPISEAPARVRVKFQRSIIGLRQLLNYRNPE-QFISQLASG-KTLMSLDFKLNSEEQQGWLDITYLDDDLRLGRGNEGSLFVLTK 194          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7R9YT06_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YT06_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.550e-6
Identity = 58/199 (29.15%), Postives = 87/199 (43.72%), Query Frame = 0
Query:   31 PSPKSGLSDMKRTLFSLLEGLNRGIDIDPDSETMTSEEADVEEAIEALEDYYPPQFPTRDPRLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQV--QGRVRASNEERQIWEPENVKCGFLSWFADNWKTFRAFQVADITYLDDELRITRGQTGSVAVFQRI 227
            PS        K  L  L+  L +G D  P+      ++A+VE A  ALE+  P   P     L G W L+YT+SA       + GL R       G I QV++G    +  +E   F      N+VS  ++   + +V+   +E +I     VK           +T R      ITYLDD+LR++RG  G++ V   +
Sbjct:   46 PSKAEKREARKAELLELIAPLKKGADATPE------DQAEVEAAAAALEELNPTPRPLTSDLLNGGWNLLYTTSA------SILGLSRPAIFRPSGPIIQVLDGPGLAARNIEPAPFF-----NQVSAQLEPVNEKKVKVQFKEFKILGVIPVKAP---------ETARG--ELTITYLDDDLRVSRGDKGNLFVLSMV 216          
BLAST of Gcaud8394.t1 vs. uniprot
Match: A0A7S0S1G1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1G1_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.780e-6
Identity = 58/195 (29.74%), Postives = 83/195 (42.56%), Query Frame = 0
Query:   41 KRTLFSLLEGLNRGIDIDPDSETMTSEE-ADVEEAIEALEDYYPPQFPTRDPRLPGRWRLVYTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELPLIGNEVSLDIQVQGRVRASNEERQIWEPENVKCGFLSWFADNWKTFRAFQVAD----ITYLDDELRITRGQTGSVAVFQRIAED 230
            K+ L  L+  L RG+       T T E+ A VE A  ALE   P   P   P L G W L+YT+SA       + G  R       G I QV++  +G +  +E   F   +  N V L      +V    +E +I+               N   F+A   A     +TYLD+ELR++RG  G++ V +    D
Sbjct:   41 KQELLDLVAPLKRGL-------TATEEDKAAVEAAANALEAVNPTPKPLASPLLSGSWELLYTTSA------SILGTSRPALLRPAGPIYQVLDAANGKARNIETTPFFNQVSANLVPLSAN---KVAVQFQEFRIF---------------NLIAFKAPPSAQGELAVTYLDEELRVSRGDKGNLFVLRMADRD 204          
The following BLAST results are available for this feature:
BLAST of Gcaud8394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IXL7_9FLOR1.330e-9763.64Chromoplast-specific carotenoid-associated protein... [more]
R7QI70_CHOCR6.770e-4351.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A696_9RHOD7.000e-2232.29Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0AVI8_9STRA7.200e-1232.61Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4MXT9_9STRA2.700e-1136.62Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A6T7K4J5_9STRA2.010e-831.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1CXT1_CYCTE1.750e-730.07Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
K9RVA7_SYNP34.290e-730.77PAP_fibrillin n=1 Tax=Synechococcus sp. (strain AT... [more]
A0A7R9YT06_9CHLO1.550e-629.15Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A7S0S1G1_9CHLO1.780e-629.74Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 39..224
e-value: 1.5E-19
score: 70.7
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 35..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1597_length_9575_cov_4.430620contigNODE_1597_length_9575_cov_4.430620:269..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8394.t1Gcaud8394.t1Gracilaria caudata M_176_S67 malemRNANODE_1597_length_9575_cov_4.430620 269..1105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8394.t1 ID=Gcaud8394.t1|Name=Gcaud8394.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=236bp
EYYSTAYVFVRPRQTPSIASRIVCVQQKDAPSPKSGLSDMKRTLFSLLEG
LNRGIDIDPDSETMTSEEADVEEAIEALEDYYPPQFPTRDPRLPGRWRLV
YTSSAITRYFGGVTGLQRLLPNAAVGEITQVIEGEDGTSTFLENVTFELP
LIGNEVSLDIQVQGRVRASNEERQIWEPENVKCGFLSWFADNWKTFRAFQ
VADITYLDDELRITRGQTGSVAVFQRIAEDNQGET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP