Gcaud8371.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8371.t1
Unique NameGcaud8371.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length577
Homology
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BLAST of Gcaud8371.t1 vs. uniprot
Match: A0A2V3J3K9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K9_9FLOR)

HSP 1 Score: 652 bits (1682), Expect = 8.730e-228
Identity = 356/573 (62.13%), Postives = 427/573 (74.52%), Query Frame = 0 
Query:    1 LPALDLLHHLSQLAAPAAPDELNDLIRHIAANRALLQNVVAAALSPPVHCVDAPRERLPRAWVLSVLLRHGPAPLRDALADEPSLIVAFADVFRAPPTKLDAALAAHAADVLRALLQQFPKQTASALHRTQLVARLVQHVSLQPAADLLPRFVGTRIFTSGFSPVLPMHKRAIVMMASARVHHLLLARFEHAVQVLLAQKQGSREYAAASVEGVCNAMAAISMRAMCIPRKHEDSDERTDVQYSVGLGLISASVYNDAKDYLNLLRSVQPLRQLLQLALRADARQLPEVLFPTMTLLCSLLRAIRKKNKSLFPSMRKAVAEVDTSRIAGVLCDTVRTFEHMLHADNALIVGRARLAVVDLLREACCTINEHSLCALLRAHDYALVRRLLAL-TRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFELLLRARSCAPLWTLLRSFVCSASFERAMRRSEHHDGARHDALLELEELYDEHVRAAEETGLQKVSELKQSKLRGD-TEIDVDALYGQSEDYGQEVYIRALLQEVSGANDSTPPSDNVVQHAAEAVHHAAEAFTERFNRAL 571
            LPALD+L  L+  + PA P++L DL+ HIA+   LLQ+ + A LSP +    +PR+RLPR WVL++L+RHGP+ LRDA+A+ P+LI AFADVF  PPTKLDAALAAHAADVLRALL ++PKQTASAL +T LV RLVQH+S+QPAA+LLPRFVGTR+FTSG+SP+LPMHKRAI MMA ARVHHLLLAR++HAV VLL  KQGS  +AAA++EG CNAMAAISMRAMCIPRKHEDSDERTDV Y+ GLGLI+ASVYNDAKDYLNLLR+VQPL +L+++A   DA  +P+V  PTM+LLCSLLRA+RKK KSLFPSMR AVAEVDT+ I  +L   V   E +L  D A IVGR RLA+VDL+REAC T+NE SL  LL A+++ALV  LL L T+                                     F +  + R+    W LL+SFVCS  FE AM     H    HD L+ELEE YDEH+++ E+ GLQKVS+LK+SKL  + TEIDVDALYGQSEDYG EV+IR LL EVSG +D  PPSDNVVQHAAEA+HHAAEAF +RF+R L
Sbjct:   46 LPALDMLESLASFSEPAPPNQLTDLVNHIASKPELLQSFINAGLSPSLDTPGSPRDRLPRTWVLAILVRHGPSSLRDAVAENPALIRAFADVFSTPPTKLDAALAAHAADVLRALLHEYPKQTASALFKTPLVTRLVQHISIQPAAELLPRFVGTRVFTSGYSPILPMHKRAIFMMADARVHHLLLARYQHAVHVLLQTKQGSATHAAATIEGCCNAMAAISMRAMCIPRKHEDSDERTDVTYASGLGLITASVYNDAKDYLNLLRNVQPLAELIRIAFEPDAAAIPDVFLPTMSLLCSLLRAMRKKKKSLFPSMRSAVAEVDTTLICALLVTIVPALERVLRTD-APIVGRTRLAIVDLVREACATVNESSLTKLLCANEHALVHCLLHLATKMNHNDLLMTRVSQAFGAVFARCKQLGLELLHHSEVLHFTV--QFRNVPASWPLLQSFVCSTCFEEAMHSCGQHT---HDVLIELEEFYDEHIKSQEDLGLQKVSDLKRSKLSAESTEIDVDALYGQSEDYGHEVFIRGLLHEVSGVHDDAPPSDNVVQHAAEAMHHAAEAFADRFSRGL 612
The following BLAST results are available for this feature:
BLAST of Gcaud8371.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3K9_9FLOR8.730e-22862.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1588_length_9614_cov_3.697994contigNODE_1588_length_9614_cov_3.697994:175..1905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8371.t1Gcaud8371.t1Gracilaria caudata M_176_S67 malemRNANODE_1588_length_9614_cov_3.697994 175..1905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8371.t1 ID=Gcaud8371.t1|Name=Gcaud8371.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=577bp
LPALDLLHHLSQLAAPAAPDELNDLIRHIAANRALLQNVVAAALSPPVHC
VDAPRERLPRAWVLSVLLRHGPAPLRDALADEPSLIVAFADVFRAPPTKL
DAALAAHAADVLRALLQQFPKQTASALHRTQLVARLVQHVSLQPAADLLP
RFVGTRIFTSGFSPVLPMHKRAIVMMASARVHHLLLARFEHAVQVLLAQK
QGSREYAAASVEGVCNAMAAISMRAMCIPRKHEDSDERTDVQYSVGLGLI
SASVYNDAKDYLNLLRSVQPLRQLLQLALRADARQLPEVLFPTMTLLCSL
LRAIRKKNKSLFPSMRKAVAEVDTSRIAGVLCDTVRTFEHMLHADNALIV
GRARLAVVDLLREACCTINEHSLCALLRAHDYALVRRLLALTRAFSRNEM
VLTRVAQAFGAVLSRAPQLGDELLQRIPELFELLLRARSCAPLWTLLRSF
VCSASFERAMRRSEHHDGARHDALLELEELYDEHVRAAEETGLQKVSELK
QSKLRGDTEIDVDALYGQSEDYGQEVYIRALLQEVSGANDSTPPSDNVVQ
HAAEAVHHAAEAFTERFNRALLQHHE*
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