Gcaud8374.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8374.t1
Unique NameGcaud8374.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length632
Homology
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A2V3J3R5_9FLOR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3R5_9FLOR)

HSP 1 Score: 1169 bits (3023), Expect = 0.000e+0
Identity = 563/631 (89.22%), Postives = 601/631 (95.25%), Query Frame = 0
Query:    1 MLRSAPSRLLRSFRATKRHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            MLR+A SRL       KR LST TTK+GGY+VIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMT DDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRT++GLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDL+MD HDGSCRG+IALC+EDGSLHRF+AHATIIATGGYG+CYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKN+NGERFMERYAPSAKDLASRDVVSRSMT+EIREGRGVGK+KDHI+LHLDHLEP+VLKERLPGITETAK+FAGVDV K+PIPVLPTVHYNMGGIPTNW+GEVITLKDGDPNYVIPGL AAGEAACASVHGANRLGANSLLDIVVFGRATAKR AELVKPNSAHR LP  AGEQAIADMD+VRYADG++RTSEIRLNMQKIMQ+HAAVFR+DESLKEGC+K+D CY SF  VKT+DRDMI+NTDM+ETLEL+NLLQNA++T+HSAEARKESRGAHAREDFTERDDE WMKHTLGWVC+  EK+  RG+V I+YRPVI+ SLDD+EQ AFPPAKRVY
Sbjct:    1 MLRTASSRLFTRLSGAKRPLSTKTTKIGGYDVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTPDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTKEGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLLMDEHDGSCRGIIALCLEDGSLHRFSAHATIIATGGYGRCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNSNGERFMERYAPSAKDLASRDVVSRSMTLEIREGRGVGKNKDHIYLHLDHLEPAVLKERLPGITETAKIFAGVDVFKEPIPVLPTVHYNMGGIPTNWQGEVITLKDGDPNYVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATAKRAAELVKPNSAHRALPERAGEQAIADMDKVRYADGDVRTSEIRLNMQKIMQDHAAVFRTDESLKEGCDKIDECYSSFKQVKTADRDMIWNTDMVETLELKNLLQNAIITMHSAEARKESRGAHAREDFTERDDEKWMKHTLGWVCDEGEKQLSRGFVHIDYRPVISQSLDDSEQKAFPPAKRVY 631          
BLAST of Gcaud8374.t1 vs. uniprot
Match: R7QV80_CHOCR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV80_CHOCR)

HSP 1 Score: 1095 bits (2832), Expect = 0.000e+0
Identity = 535/635 (84.25%), Postives = 577/635 (90.87%), Query Frame = 0
Query:    1 MLRSAPSRLLRSFRATK----RHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            +LR    RL R+  A      R LST+T+KVGGY+V+DHE DV VVGAGGAGLRATIGACEAGL+TA VTKLFPTRSHTVAAQGGINGALGNMT DDWRWHMYDTVKGSDWLGDQDAIHYMCREAP TIIELENYGVPFSRTEDG IYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQ+LKHDA FFVEYFALDLIMDP DGSCRGV ALCMEDGSLHRFNAHATIIATGGYG+ YFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEG+RGEGGFLKN+ GERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVG  KDHI LHLDHLEPSVL ERLPGI+ETAK+FAGVDV K+PIPVLPTVHYNMGGIPTNWRGEV+T+KDGDPNYV+PGL AAGEAACASVHGANRLGANSLLDIVVFGRATA R  E++KP++  RPLP  AGE+AIADMD+VRYADGE+RTS IR +MQKIMQ++AAVFR+ ESL +GC+ +D CYESF  VK +DRDMI+NTDM+ETLELRNLLQNA++T+H AEARKESRGAHAREDFTERDDE WMKHTLGWV  H EKK  RG+  I+YRPV++ SLDD+EQ AFPPAKRVY
Sbjct:    2 LLRPFAGRLARAIAAAPVRATRALSTSTSKVGGYDVVDHETDVLVVGAGGAGLRATIGACEAGLRTANVTKLFPTRSHTVAAQGGINGALGNMTPDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPATIIELENYGVPFSRTEDGRIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQALKHDAEFFVEYFALDLIMDPVDGSCRGVTALCMEDGSLHRFNAHATIIATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGFLKNSEGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGPKKDHIHLHLDHLEPSVLAERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWRGEVVTVKDGDPNYVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATAMRCGEIIKPDTPVRPLPKGAGEEAIADMDKVRYADGEIRTSAIREDMQKIMQDNAAVFRTQESLSQGCKLIDECYESFGKVKITDRDMIWNTDMVETLELRNLLQNAVITMHGAEARKESRGAHAREDFTERDDEVWMKHTLGWVSSHEEKKNSRGFAHIDYRPVVSKSLDDSEQEAFPPAKRVY 636          
BLAST of Gcaud8374.t1 vs. uniprot
Match: M2Y5V9_GALSU (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5V9_GALSU)

HSP 1 Score: 974 bits (2519), Expect = 0.000e+0
Identity = 464/605 (76.69%), Postives = 533/605 (88.10%), Query Frame = 0
Query:   30 YEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRG---YVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            Y ++DH  D  VVGAGGAGLRATIG CEAGLK AC+TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWHMYDTVKGSDWLGDQDAIHYMCREAP T+IELE+YG+PFSRT++G IYQRAFGGQSL FGKGGQA+RCAAAADRTGHA+LHTLYGQ+L+H+A FFVEYFALDLIMD  +G CRGV+ALC+EDG++HRF ++ATI+ TGGYGK YFSATSAHTCTGDGNAMVARAG+PLQDLEFVQFHPTGIYGAGCLITEG RGEGG+L N+NGERFMERYAPSAKDLASRDVVSRSMT+EIREGRGVG  KDHI+LHL+HL P V+ ERLPGITETAK+FAGVDV K+PIPVLPTVHYNMGGIPTNW+G+V+T+KDG+PN V+PGL AAGEAACASVHGANRLGANSLLDIVVFGRA A+ VA+L +P     PLP DAGE++IA +D+ R+A+G L+TSEIRL+MQ+ MQNHA+VFR  + L+EGC+ M+ CYES   VK SDR MIFNTD++ETLEL NLLQNAL+TI+ AEAR ESRGAH+RED+ +RDD NWMKHTLGW+    +     G   YV ++YRPVI+ +LD AEQ +FPPA+RVY
Sbjct:   58 YSIVDHTYDAVVVGAGGAGLRATIGLCEAGLKAACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPATVIELEHYGLPFSRTQEGKIYQRAFGGQSLKFGKGGQAFRCAAAADRTGHALLHTLYGQALRHNATFFVEYFALDLIMDK-EGVCRGVVALCLEDGTIHRFRSNATILCTGGYGKAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLTNSNGERFMERYAPSAKDLASRDVVSRSMTIEIREGRGVGPLKDHIYLHLEHLPPDVIHERLPGITETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKGQVVTIKDGNPNSVVPGLYAAGEAACASVHGANRLGANSLLDIVVFGRACARTVADLYRPGQTQPPLPEDAGEESIARLDQYRHANGSLKTSEIRLHMQRTMQNHASVFRVSQVLQEGCKAMNECYESLQDVKISDRSMIFNTDLVETLELENLLQNALITIYGAEARHESRGAHSREDYPKRDDSNWMKHTLGWISSPKQPFIAAGQKSYVRLDYRPVISETLDAAEQESFPPAQRVY 661          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A1X6NLE1_PORUM (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLE1_PORUM)

HSP 1 Score: 950 bits (2456), Expect = 0.000e+0
Identity = 469/633 (74.09%), Postives = 531/633 (83.89%), Query Frame = 0
Query:    5 APSRLLRSFRATKRHLSTNTTKVG--GYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPL---PADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKK-YGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            AP  ++ +     R  +T TT      Y +IDHE D  VVGAGGAGLRA IG CE+GLK AC+TKLFPTRSHTVAAQGGIN +LGNM +D ++WHMYDTVKGSD+LGDQDAI YM + AP+ +IELE+YG+PFSRTE G IYQRAFGGQS +FG GGQAYRCAAAADRTGHAMLHTLYGQ+LKHDA FFVEYFALDL+MD  DG CRGV+ALCMEDG+LHRF +H TI+ATGGYG+CYFSATSAHTCTGDGNAMVARAG+PLQDLEFVQFHPTGIYGAGCLITEG+RGEGGFLKN+ GERFMERYAPSAKDLASRDVVSR+MTMEI+EGRGVG DKDHI LHLDHL P +L +RLPGI+ETAK+FAGVDV K+PIPVLPTVHYNMGGIPTNWRGEV++    DPN V+PGLLAAGEAACASVHGANRLGANSLLDIVVFGRA A RVAE +KPN+ H PL   P   GE ++  +D VR+ADG  RTS +RL MQK MQNHAAVFR+ ++L  GC+K+DA Y  +  +K SDR+M++NTD+IE LELRNLLQNA+VT+HSAEARKESRGAHAREDFTERDD  W KHTLGWV  H E   + RG+V I+YRPVIN +L   EQ  FPP  RVY
Sbjct:   46 APRAVVGAAAQAAREDATTTTAQSPHAYPIIDHEYDAIVVGAGGAGLRAMIGLCESGLKAACITKLFPTRSHTVAAQGGINASLGNMHEDKYQWHMYDTVKGSDYLGDQDAIQYMTKVAPEAVIELEHYGLPFSRTESGHIYQRAFGGQSREFGDGGQAYRCAAAADRTGHAMLHTLYGQALKHDATFFVEYFALDLLMDD-DGRCRGVLALCMEDGTLHRFRSHETILATGGYGRCYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGFLKNSIGERFMERYAPSAKDLASRDVVSRAMTMEIQEGRGVGPDKDHILLHLDHLPPELLNKRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWRGEVLSPTKEDPNAVVPGLLAAGEAACASVHGANRLGANSLLDIVVFGRACAHRVAERLKPNTPHEPLGNAPQTTGEASVESLDDVRWADGGTRTSVLRLEMQKAMQNHAAVFRTQKTLAAGCDKLDAVYAKYGDLKISDREMVWNTDLIEALELRNLLQNAVVTMHSAEARKESRGAHAREDFTERDDVAWRKHTLGWVAPHDEPAAHPRGFVKIDYRPVINETLYPEEQKPFPPKARVY 677          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A7S0ZFX4_9RHOD (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFX4_9RHOD)

HSP 1 Score: 950 bits (2456), Expect = 0.000e+0
Identity = 464/629 (73.77%), Postives = 539/629 (85.69%), Query Frame = 0
Query:   10 LRSFRATKRHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAG-----EQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEK--KYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            L S +  +R L+T  +K+G Y V++HE D  VVGAGGAGLRATIG CEAGLKTA +TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWHMYDTVKGSDWLGDQDAIHYMCREAP  + ELE YGVPFSRTEDG IYQRAFGGQSL FGKGGQAYRCAAAADRTGHA+LHTLYGQ+L+H+A FFVEYFALDL+M P DG+C G++ALCMEDGSLHRF A++T++ATGGYG+ YFSATSAHTCTGDGNAMVARA +PL+DLEFVQFHPTGIYGAGCLITEG RGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMT+EIREGRGVG ++DHI LHLDHL P VL+ERLPGITETAK+FAGVDV ++PIPVLPTVHYNMGGIPTNWRGEVI L +   + ++PGLLAAGEAACASVHGANRLGANSLLDIVVFGRATA  V++ + P +  + L  +       E+++ +++R R A+G +  +++RL MQK+MQ+HAAVFR+ ESL EGCEKM+  Y   + V+  DR +I+NTD++E LEL+NLLQNA+ T+HSAEARKESRGAHAREDF+ERDD+NWMKHTL +V +H +K     RG V +EYR V++ SLD+AEQ AFPPAKRVY
Sbjct:   36 LNSSQQVRRGLATTVSKIGDYSVVEHEYDAIVVGAGGAGLRATIGLCEAGLKTANITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPAAVRELEAYGVPFSRTEDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHALLHTLYGQALRHNATFFVEYFALDLLMRP-DGACGGILALCMEDGSLHRFRANSTVLATGGYGRAYFSATSAHTCTGDGNAMVARANLPLEDLEFVQFHPTGIYGAGCLITEGCRGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTIEIREGRGVGPNRDHIHLHLDHLPPEVLRERLPGITETAKIFAGVDVTREPIPVLPTVHYNMGGIPTNWRGEVIRLDESGKDEIVPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAHTVSDRITPGA--KVLKDEVHDKRELERSLTNLERFRNANGPVSVADLRLEMQKVMQDHAAVFRTQESLAEGCEKMNYVYSKLADVRVEDRSLIWNTDLLEALELQNLLQNAVATMHSAEARKESRGAHAREDFSERDDKNWMKHTLAYVGDHEDKIPLSDRGQVRLEYRDVVSHSLDNAEQEAFPPAKRVY 661          
BLAST of Gcaud8374.t1 vs. uniprot
Match: M1UY25_CYAM1 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UY25_CYAM1)

HSP 1 Score: 946 bits (2444), Expect = 0.000e+0
Identity = 457/615 (74.31%), Postives = 524/615 (85.20%), Query Frame = 0
Query:   17 KRHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            KR ++T  T    Y V++HE D  V+GAGGAGLRA IG  EAGLKTACVTKLFPTRSHTVAAQGGIN ALGNMT+DDWRWHMYDTVKGSDWLGDQDAIHYMCREAP  +IELE+YGVPFSRTEDG IYQRAFGGQSL FGKGGQAYRCAAAADRTGHA+LHTLYGQ+LKH+A+FFVEYF LDLIMD  +G CRG++ALC+EDG++HRF +HA II TGGYG+ YFSATSAHTCTGDGNAM  RAGIPLQD+EFVQFHPTGIYGAGCLITEG RGEGG L+N  GERFMERYAPSAKDLASRDVVSR+MT+EI EGRG G  KDHI L L+H+ P +LKERLPGI ETA++FAGVDV K+PIPVLPTVHYNMGGIPTNWRGEV+     DP+ V+PGLLAAGEAACASVHGANRLGANSLLDIVVFGRA A  VAE V+P   H+PLPA+AGE AIA++DR  +A+G ++T+++RL MQKIMQNHAAVFR+ ++L+EGC+ +D CY   + V+ +DR +I+NTD+IETLEL+NLLQNA+ T+HSAE RKESRGAHAR+DF +RDDE+WMKHTL WV            V I YRPV + SLD++EQT FPPA+RVY
Sbjct:   80 KRRVATQATP--SYAVVEHEYDAVVLGAGGAGLRAVIGCAEAGLKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPKVVIELEHYGVPFSRTEDGRIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHALLHTLYGQALKHNADFFVEYFGLDLIMDE-EGVCRGLMALCLEDGTIHRFRSHAVIICTGGYGRAYFSATSAHTCTGDGNAMAVRAGIPLQDMEFVQFHPTGIYGAGCLITEGCRGEGGILRNGVGERFMERYAPSAKDLASRDVVSRAMTLEIMEGRGCGPQKDHIQLFLNHIPPEILKERLPGIMETARIFAGVDVTKEPIPVLPTVHYNMGGIPTNWRGEVLRPTASDPDAVVPGLLAAGEAACASVHGANRLGANSLLDIVVFGRACAHAVAEQVRPGMPHKPLPANAGEDAIANLDRFLHANGSIKTADLRLRMQKIMQNHAAVFRAKDTLEEGCKLIDECYSDLNEVRIADRSLIWNTDLIETLELQNLLQNAVATMHSAEQRKESRGAHARDDFPKRDDEHWMKHTLAWVHAQDALPANASPVRIGYRPVHDWSLDESEQTPFPPAQRVY 691          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A2P6TSL3_CHLSO (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSL3_CHLSO)

HSP 1 Score: 935 bits (2417), Expect = 0.000e+0
Identity = 455/622 (73.15%), Postives = 522/622 (83.92%), Query Frame = 0
Query:   10 LRSFRATKRHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            LR      R LST+T+  GGY++IDHE D  VVGAGGAGLRA +G  EAG  TAC+TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWH YDTVKGSDWLGDQDAI YMC+EAP  + ELENYG+PFSRT+DG IYQRAFGGQSLDFG+GGQAYRC AAADRTGHAMLHTLYG ++KHD  FFVEYFALDLIMD   G+CRGVIA+CMEDG+LHRF AH TI+ATGGYG+ YFSATSAHTCTGDGNAM ARAG+PLQDLEFVQFHPTGIYGAGCLITEG+RGEGG L+N+ GERFMERYAP+AKDLASRDVVSRSMTMEIREGRGVG +KDHI+LHL+HL P +L ERLPGI+ETA +FAGVDV K+PIPV+PTVHYNMGG+PTN+ GEV+  KDG+P+ V+PGL+AAGEAACASVHGANRLGANSLLDIVVFGRA A RV E++KP + H PLPADAG++ IA +D++R A G L T+ IR NMQKIMQN+AAVFR+ E+L EGC  +D C ESF  ++ +DR +++NTD++E +EL NLL NA +T+HSAE RKESRGAHAREDFTERDD+NWMKHTLGW       K G+  V I+YRPV    L   +    PP  RVY
Sbjct:   13 LRRLGQDSRLLSTSTS--GGYKLIDHEFDAIVVGAGGAGLRAAVGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIEYMCKEAPKAVYELENYGLPFSRTDDGKIYQRAFGGQSLDFGRGGQAYRCCAAADRTGHAMLHTLYGAAMKHDCKFFVEYFALDLIMDQ-SGTCRGVIAMCMEDGTLHRFKAHNTILATGGYGRAYFSATSAHTCTGDGNAMAARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPELLAERLPGISETAAIFAGVDVTKEPIPVIPTVHYNMGGVPTNYHGEVVRPKDGNPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACALRVQEILKPGTPHPPLPADAGQETIARLDKLRNAKGGLTTATIRRNMQKIMQNNAAVFRTQETLAEGCNLIDECVESFQDIRLADRGLVWNTDLLEAVELENLLANAAITMHSAEQRKESRGAHAREDFTERDDKNWMKHTLGWF---DWDKAGKNKVSIDYRPVHMQPLTK-DMDHIPPKARVY 627          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A388JXX0_CHABU (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JXX0_CHABU)

HSP 1 Score: 933 bits (2412), Expect = 0.000e+0
Identity = 461/638 (72.26%), Postives = 530/638 (83.07%), Query Frame = 0
Query:    4 SAPSRLLRSFRATKRHL------STNTTKVGG----YEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            + P  L R+F +  R        ST TT V      Y ++DH  D  VVGAGGAGLRA IG  E G  TAC+TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWHMYDTVKGSDWLGDQDAI YMCREAP  ++ELENYG+PFSRTE+G IYQRAFGGQSLD+GKGGQAYRCA AADRTGHAMLH+LYGQ++KHD  FFVEYFALDLIMD  +G CRGVIAL MEDGSLHRF A  TI+ATGGYG+ YFSATSAHTCTGDGNAMVARAG+PLQDLEFVQFHPTGIYGAGCLITEG+RGEGG L+N+ GERFMERYAP+AKDLASRD+VSR+MT+EIREGRGVG +KDHI+LHL+HL P VLKERLPGI+ETA +FAGVDV K+PIPVLPTVHYNMGGIPTN+ GE +TL+ GDP++V+ GL+AAGEAACASVHGANRLGANSLLDIVVFGRA A RVAE+ KP    +PLP  AGE+ IA +DR+RYADG+L T+EIRL+MQ+IMQN AAVFR+ +SL+ GC+ +D C  SFS+VKT DR +++NTD++ETLEL NLL NA +T+HSAEARKESRGAHAREDF  RDDENWMKH+LG+  +        G   ++YRPV   +LD+  +T FPP  RVY
Sbjct:   63 NCPPFLSRAFHSANRAAVTAFPASTATTTVSASGSAYPIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPHAVLELENYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHSLYGQAMKHDTQFFVEYFALDLIMDE-EGECRGVIALNMEDGSLHRFRAKETILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDIVSRAMTLEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETASIFAGVDVTKEPIPVLPTVHYNMGGIPTNFMGEAVTLRGGDPDFVVRGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIHKPGEKQKPLPPGAGEETIARLDRLRYADGDLSTAEIRLDMQRIMQNDAAVFRTQDSLEHGCKLIDECMASFSNVKTQDRSLVWNTDLVETLELENLLINATITMHSAEARKESRGAHAREDFPNRDDENWMKHSLGFWRD--------GKCVMDYRPVHMNTLDNEVET-FPPKARVY 690          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A7S0UQ10_9CHLO (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UQ10_9CHLO)

HSP 1 Score: 931 bits (2407), Expect = 0.000e+0
Identity = 453/609 (74.38%), Postives = 521/609 (85.55%), Query Frame = 0
Query:   23 NTTKVGGYEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            N +  G Y+ IDH+ D  VVGAGGAGLRA +G  E G KTAC+TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWH YDTVKGSDWLGDQDAI YMCREAP  + ELENYG+PFSRTEDG IYQRAFGGQSLD+G+GGQAYRCA AADRTGHAMLHTLYGQ+++ D NF+VEYFALDLIMD ++G CRGVIALCMEDG+LHRF AH TI+ATGGYG+ YFSATSAHTCTGDGNAM ARAGIPLQDLEFVQFHPTGIYGAGCLITEG+RGEGG L+N+ GERFMERYAP+AKDLASRDVVSRSMTMEIREGRGVG +KDHIFLHL+HL P +L ERLPGI+ETA +FAGVDV K+PIPVLPTVHYNMGGIPTN++GEV+     +P+ V+ GL+AAGEAACASVHGANRLGANSLLDIVVFGRA A RV E++KPN+ H+PLPA+AG++ ++ +D++R+A G LRT+EIR NMQ+IMQN AAVFR+  SL+EGC K+D C  SF+ VKT+DR M++NTD+IETLEL NLL NA +T+HSAE RKESRGAHAREDF++RDD NWMKHTLG    + +K+     VGI YRPV +  LD +E    PP  RVY
Sbjct:   22 NYSTQGAYQFIDHQFDAIVVGAGGAGLRAAVGLSEQGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIQYMCREAPKAVRELENYGLPFSRTEDGKIYQRAFGGQSLDYGRGGQAYRCACAADRTGHAMLHTLYGQAMRRDCNFYVEYFALDLIMD-NEGVCRGVIALCMEDGTLHRFQAHQTILATGGYGRAYFSATSAHTCTGDGNAMAARAGIPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIFLHLNHLPPELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGEVLKPTAEEPDKVVRGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVGEVLKPNTPHQPLPANAGQECLSRLDKLRFAKGNLRTAEIRRNMQRIMQNDAAVFRTQSSLEEGCTKIDECVRSFADVKTTDRGMVWNTDLIETLELENLLINAAITMHSAERRKESRGAHAREDFSKRDDVNWMKHTLGQFDLNKDKE-----VGISYRPVHSQPLD-SEMDHVPPKARVY 623          
BLAST of Gcaud8374.t1 vs. uniprot
Match: A0A1U8A8K2_NELNU (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A8K2_NELNU)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 462/622 (74.28%), Postives = 527/622 (84.73%), Query Frame = 0
Query:   14 RATKRHLSTNTTKVGG---YEVIDHEVDVCVVGAGGAGLRATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLIMDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCTGDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEPSVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVITLKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVAELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNHAAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLLQNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLG-WVCEHTEKKYGRGYVGIEYRPVINTSLDDAEQTAFPPAKRVY 631
            R T R LST +T  GG   Y ++DH  D  VVGAGGAGLRA IG  E G  TAC+TKLFPTRSHTVAAQGGIN ALGNMT+DDWRWHMYDTVKGSDWLGDQDAI YMCREAP  +IELENYG+PFSRTEDG IYQRAFGGQSLDFGKGGQAYRCA AADRTGHA+LHTLYGQ++KH+  FFVEYFALDLIMD   G+C+GVIAL MEDG+LHRF A +TI+ TGGYG+ YFSATSAHTCTGDGNAMVARAG+PLQDLEFVQFHPTGIYGAGCLITEG+RGEGG L+N+ GERFMERYAP+AKDLASRDVVSRSMTMEIREGRGVG  KDHI+LHL+HL P VLKERLPGI+ETA +FAGVDV K+PIPVLPTVHYNMGGIPTN  GEV+ +K  DP+ V+PGL+AAGEAACASVHGANRLGANSLLDIVVFGRA A RVAE++KP    +PL +DAGE+ IA +D++R+++G L TS+IRLNMQ++MQN+AAVFR+ E+L+EGC  +D  +ESF  VK  DR +I+N+D+IET+EL NLL NA +T+HSAEARKESRGAHAREDFT+RDDENW+KHTLG WV E          V ++YRPV   +LDD E  +FPP  RVY
Sbjct:   29 RLTTRFLSTEST--GGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDS-SGTCQGVIALNMEDGTLHRFRAASTILTTGGYGRTYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVHIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEILKPGEKQKPLESDAGEKTIAWLDKLRHSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCRLIDKAWESFHDVKLKDRSLIWNSDLIETIELENLLINASITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWVNEK---------VRLDYRPVHMKTLDD-EVESFPPKARVY 637          
The following BLAST results are available for this feature:
BLAST of Gcaud8374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3R5_9FLOR0.000e+089.22Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
R7QV80_CHOCR0.000e+084.25Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
M2Y5V9_GALSU0.000e+076.69Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A1X6NLE1_PORUM0.000e+074.09Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S0ZFX4_9RHOD0.000e+073.77Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
M1UY25_CYAM10.000e+074.31Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A2P6TSL3_CHLSO0.000e+073.15Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A388JXX0_CHABU0.000e+072.26Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A7S0UQ10_9CHLO0.000e+074.38Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A1U8A8K2_NELNU0.000e+074.28Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015939Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalPFAMPF02910Succ_DH_flav_Ccoord: 491..631
e-value: 1.5E-43
score: 147.8
IPR011281Succinate dehydrogenase, flavoprotein subunitTIGRFAMTIGR01816TIGR01816coord: 35..631
e-value: 5.6E-287
score: 950.6
NoneNo IPR availableGENE3D1.20.58.100coord: 462..572
e-value: 2.3E-35
score: 123.3
NoneNo IPR availableGENE3D4.10.80.40succinate dehydrogenase protein domaincoord: 573..631
e-value: 1.4E-16
score: 61.9
NoneNo IPR availablePIRSFPIRSF000171SDHA_APRA_LASPOcoord: 29..604
e-value: 1.3E-38
score: 130.5
NoneNo IPR availablePANTHERPTHR11632:SF79SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIALcoord: 11..631
IPR027477Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilyGENE3D3.90.700.10Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domaincoord: 277..380
e-value: 1.1E-167
score: 559.9
IPR027477Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilySUPERFAMILY56425Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domaincoord: 267..385
IPR003953FAD-dependent oxidoreductase 2, FAD binding domainPFAMPF00890FAD_binding_2coord: 38..435
e-value: 2.2E-117
score: 392.7
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 38..445
e-value: 1.1E-167
score: 559.9
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 30..458
IPR014006Succinate dehydrogenase/fumarate reductase, flavoprotein subunitTIGRFAMTIGR01812TIGR01812coord: 38..617
e-value: 6.6E-234
score: 775.6
IPR030664FAD-dependent oxidoreductase SdhA/FrdA/AprAPANTHERPTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITcoord: 11..631
IPR003952Fumarate reductase/succinate dehydrogenase, FAD-binding sitePROSITEPS00504FRD_SDH_FAD_BINDINGcoord: 72..81
IPR037099Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamilySUPERFAMILY46977Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domaincoord: 481..631

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1588_length_9614_cov_3.697994contigNODE_1588_length_9614_cov_3.697994:6756..8651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8374.t1Gcaud8374.t1Gracilaria caudata M_176_S67 malemRNANODE_1588_length_9614_cov_3.697994 6756..8651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8374.t1 ID=Gcaud8374.t1|Name=Gcaud8374.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=632bp
MLRSAPSRLLRSFRATKRHLSTNTTKVGGYEVIDHEVDVCVVGAGGAGLR
ATIGACEAGLKTACVTKLFPTRSHTVAAQGGINGALGNMTKDDWRWHMYD
TVKGSDWLGDQDAIHYMCREAPDTIIELENYGVPFSRTEDGLIYQRAFGG
QSLDFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKHDANFFVEYFALDLI
MDPHDGSCRGVIALCMEDGSLHRFNAHATIIATGGYGKCYFSATSAHTCT
GDGNAMVARAGIPLQDLEFVQFHPTGIYGAGCLITEGARGEGGFLKNANG
ERFMERYAPSAKDLASRDVVSRSMTMEIREGRGVGKDKDHIFLHLDHLEP
SVLKERLPGITETAKVFAGVDVHKDPIPVLPTVHYNMGGIPTNWRGEVIT
LKDGDPNYVIPGLLAAGEAACASVHGANRLGANSLLDIVVFGRATAKRVA
ELVKPNSAHRPLPADAGEQAIADMDRVRYADGELRTSEIRLNMQKIMQNH
AAVFRSDESLKEGCEKMDACYESFSSVKTSDRDMIFNTDMIETLELRNLL
QNALVTIHSAEARKESRGAHAREDFTERDDENWMKHTLGWVCEHTEKKYG
RGYVGIEYRPVINTSLDDAEQTAFPPAKRVY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015939Fum_Rdtase/Succ_DH_flav-like_C
IPR011281Succ_DH_flav_su_fwd
IPR027477Succ_DH/fumarate_Rdtase_cat_sf
IPR003953FAD-binding_2
IPR036188FAD/NAD-bd_sf
IPR014006Succ_Dhase_FrdA_Gneg
IPR030664SdhA/FrdA/AprA
IPR003952FRD_SDH_FAD_BS
IPR037099Fum_R/Succ_DH_flav-like_C_sf